co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G39270

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033587: shikimate biosynthetic process	0.00E+00
2	GO:0045730: respiratory burst	0.00E+00
3	GO:0009268: response to pH	0.00E+00
4	GO:0035264: multicellular organism growth	0.00E+00
5	GO:0032499: detection of peptidoglycan	0.00E+00
6	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
7	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
8	GO:0002764: immune response-regulating signaling pathway	0.00E+00
9	GO:0006468: protein phosphorylation	1.97E-08
10	GO:0010200: response to chitin	2.30E-07
11	GO:0042742: defense response to bacterium	1.51E-06
12	GO:0000187: activation of MAPK activity	1.47E-05
13	GO:0009626: plant-type hypersensitive response	1.50E-05
14	GO:0060548: negative regulation of cell death	2.72E-05
15	GO:0070588: calcium ion transmembrane transport	2.89E-05
16	GO:0046777: protein autophosphorylation	4.17E-05
17	GO:0009697: salicylic acid biosynthetic process	4.37E-05
18	GO:2000037: regulation of stomatal complex patterning	9.02E-05
19	GO:0032491: detection of molecule of fungal origin	1.91E-04
20	GO:0010365: positive regulation of ethylene biosynthetic process	1.91E-04
21	GO:0051938: L-glutamate import	1.91E-04
22	GO:0051245: negative regulation of cellular defense response	1.91E-04
23	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.91E-04
24	GO:0010941: regulation of cell death	1.91E-04
25	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.91E-04
26	GO:0019673: GDP-mannose metabolic process	1.91E-04
27	GO:0035556: intracellular signal transduction	3.84E-04
28	GO:0043091: L-arginine import	4.29E-04
29	GO:0046939: nucleotide phosphorylation	4.29E-04
30	GO:0015802: basic amino acid transport	4.29E-04
31	GO:0010229: inflorescence development	4.93E-04
32	GO:0055046: microgametogenesis	4.93E-04
33	GO:0002237: response to molecule of bacterial origin	5.55E-04
34	GO:0016045: detection of bacterium	6.99E-04
35	GO:0034051: negative regulation of plant-type hypersensitive response	6.99E-04
36	GO:1900140: regulation of seedling development	6.99E-04
37	GO:0010359: regulation of anion channel activity	6.99E-04
38	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	6.99E-04
39	GO:0048281: inflorescence morphogenesis	6.99E-04
40	GO:0010498: proteasomal protein catabolic process	6.99E-04
41	GO:0009617: response to bacterium	7.12E-04
42	GO:0006612: protein targeting to membrane	9.97E-04
43	GO:0071323: cellular response to chitin	9.97E-04
44	GO:0046836: glycolipid transport	9.97E-04
45	GO:0048194: Golgi vesicle budding	9.97E-04
46	GO:0072334: UDP-galactose transmembrane transport	9.97E-04
47	GO:0072583: clathrin-dependent endocytosis	9.97E-04
48	GO:0002679: respiratory burst involved in defense response	9.97E-04
49	GO:0010306: rhamnogalacturonan II biosynthetic process	9.97E-04
50	GO:0031348: negative regulation of defense response	1.00E-03
51	GO:0071456: cellular response to hypoxia	1.00E-03
52	GO:0009814: defense response, incompatible interaction	1.00E-03
53	GO:0006486: protein glycosylation	1.04E-03
54	GO:0010227: floral organ abscission	1.09E-03
55	GO:2000038: regulation of stomatal complex development	1.32E-03
56	GO:0080142: regulation of salicylic acid biosynthetic process	1.32E-03
57	GO:0046345: abscisic acid catabolic process	1.32E-03
58	GO:0010483: pollen tube reception	1.32E-03
59	GO:0010363: regulation of plant-type hypersensitive response	1.32E-03
60	GO:0010107: potassium ion import	1.32E-03
61	GO:0071219: cellular response to molecule of bacterial origin	1.32E-03
62	GO:0009620: response to fungus	1.44E-03
63	GO:0009611: response to wounding	1.56E-03
64	GO:0010117: photoprotection	1.68E-03
65	GO:0010225: response to UV-C	1.68E-03
66	GO:0032957: inositol trisphosphate metabolic process	1.68E-03
67	GO:1900425: negative regulation of defense response to bacterium	2.07E-03
68	GO:0010405: arabinogalactan protein metabolic process	2.07E-03
69	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.07E-03
70	GO:0046855: inositol phosphate dephosphorylation	2.07E-03
71	GO:0010161: red light signaling pathway	2.93E-03
72	GO:0098869: cellular oxidant detoxification	2.93E-03
73	GO:0046470: phosphatidylcholine metabolic process	2.93E-03
74	GO:1900056: negative regulation of leaf senescence	2.93E-03
75	GO:0030091: protein repair	3.40E-03
76	GO:0008219: cell death	3.42E-03
77	GO:0010204: defense response signaling pathway, resistance gene-independent	3.88E-03
78	GO:0009808: lignin metabolic process	3.88E-03
79	GO:0010099: regulation of photomorphogenesis	3.88E-03
80	GO:0045087: innate immune response	4.33E-03
81	GO:0009867: jasmonic acid mediated signaling pathway	4.33E-03
82	GO:0090333: regulation of stomatal closure	4.40E-03
83	GO:0010112: regulation of systemic acquired resistance	4.40E-03
84	GO:0009051: pentose-phosphate shunt, oxidative branch	4.40E-03
85	GO:0006098: pentose-phosphate shunt	4.40E-03
86	GO:0051865: protein autoubiquitination	4.40E-03
87	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.93E-03
88	GO:0006887: exocytosis	5.13E-03
89	GO:0006979: response to oxidative stress	5.24E-03
90	GO:0009651: response to salt stress	5.28E-03
91	GO:0043069: negative regulation of programmed cell death	5.48E-03
92	GO:0006952: defense response	5.86E-03
93	GO:0009738: abscisic acid-activated signaling pathway	5.96E-03
94	GO:0046856: phosphatidylinositol dephosphorylation	6.06E-03
95	GO:0006970: response to osmotic stress	6.17E-03
96	GO:0006855: drug transmembrane transport	6.50E-03
97	GO:0008361: regulation of cell size	6.66E-03
98	GO:0012501: programmed cell death	6.66E-03
99	GO:0000165: MAPK cascade	6.74E-03
100	GO:0006006: glucose metabolic process	7.28E-03
101	GO:0018107: peptidyl-threonine phosphorylation	7.28E-03
102	GO:0009809: lignin biosynthetic process	7.50E-03
103	GO:0006446: regulation of translational initiation	7.91E-03
104	GO:0090351: seedling development	8.57E-03
105	GO:0046854: phosphatidylinositol phosphorylation	8.57E-03
106	GO:0009969: xyloglucan biosynthetic process	8.57E-03
107	GO:0009863: salicylic acid mediated signaling pathway	9.94E-03
108	GO:0009695: jasmonic acid biosynthetic process	1.07E-02
109	GO:0018105: peptidyl-serine phosphorylation	1.10E-02
110	GO:0009742: brassinosteroid mediated signaling pathway	1.13E-02
111	GO:0031408: oxylipin biosynthetic process	1.14E-02
112	GO:0003333: amino acid transmembrane transport	1.14E-02
113	GO:0048511: rhythmic process	1.14E-02
114	GO:0048278: vesicle docking	1.14E-02
115	GO:0016042: lipid catabolic process	1.17E-02
116	GO:0050832: defense response to fungus	1.19E-02
117	GO:0016567: protein ubiquitination	1.25E-02
118	GO:0019722: calcium-mediated signaling	1.37E-02
119	GO:0009561: megagametogenesis	1.37E-02
120	GO:0010118: stomatal movement	1.53E-02
121	GO:0061025: membrane fusion	1.70E-02
122	GO:0009414: response to water deprivation	1.76E-02
123	GO:0008654: phospholipid biosynthetic process	1.79E-02
124	GO:0010150: leaf senescence	1.86E-02
125	GO:0006891: intra-Golgi vesicle-mediated transport	1.88E-02
126	GO:0002229: defense response to oomycetes	1.88E-02
127	GO:0009737: response to abscisic acid	1.91E-02
128	GO:0016032: viral process	1.97E-02
129	GO:0030163: protein catabolic process	2.06E-02
130	GO:0006470: protein dephosphorylation	2.12E-02
131	GO:0006904: vesicle docking involved in exocytosis	2.25E-02
132	GO:0051607: defense response to virus	2.34E-02
133	GO:0016579: protein deubiquitination	2.34E-02
134	GO:0009615: response to virus	2.44E-02
135	GO:0009911: positive regulation of flower development	2.44E-02
136	GO:0009816: defense response to bacterium, incompatible interaction	2.54E-02
137	GO:0006906: vesicle fusion	2.64E-02
138	GO:0048573: photoperiodism, flowering	2.74E-02
139	GO:0009826: unidimensional cell growth	2.77E-02
140	GO:0009817: defense response to fungus, incompatible interaction	2.95E-02
141	GO:0009832: plant-type cell wall biogenesis	3.05E-02
142	GO:0009631: cold acclimation	3.27E-02
143	GO:0006508: proteolysis	3.53E-02
144	GO:0034599: cellular response to oxidative stress	3.60E-02
145	GO:0042542: response to hydrogen peroxide	4.06E-02
146	GO:0009744: response to sucrose	4.18E-02
147	GO:0051707: response to other organism	4.18E-02
148	GO:0000209: protein polyubiquitination	4.30E-02
149	GO:0045892: negative regulation of transcription, DNA-templated	4.32E-02
150	GO:0006886: intracellular protein transport	4.39E-02
151	GO:0009644: response to high light intensity	4.41E-02
152	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.78E-02
153	GO:0009664: plant-type cell wall organization	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0070191: methionine-R-sulfoxide reductase activity	0.00E+00
2	GO:2001080: chitosan binding	0.00E+00
3	GO:0004168: dolichol kinase activity	0.00E+00
4	GO:0004674: protein serine/threonine kinase activity	7.47E-11
5	GO:0016301: kinase activity	1.18E-09
6	GO:0005524: ATP binding	3.68E-08
7	GO:0005388: calcium-transporting ATPase activity	1.94E-05
8	GO:0019199: transmembrane receptor protein kinase activity	2.72E-05
9	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	4.37E-05
10	GO:0004672: protein kinase activity	4.89E-05
11	GO:0004012: phospholipid-translocating ATPase activity	9.02E-05
12	GO:0004708: MAP kinase kinase activity	1.53E-04
13	GO:0031127: alpha-(1,2)-fucosyltransferase activity	1.91E-04
14	GO:0032050: clathrin heavy chain binding	1.91E-04
15	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.91E-04
16	GO:0015085: calcium ion transmembrane transporter activity	1.91E-04
17	GO:0008446: GDP-mannose 4,6-dehydratase activity	1.91E-04
18	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.91E-04
19	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.93E-04
20	GO:0004190: aspartic-type endopeptidase activity	6.22E-04
21	GO:0046423: allene-oxide cyclase activity	6.99E-04
22	GO:0016595: glutamate binding	6.99E-04
23	GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity	6.99E-04
24	GO:0043424: protein histidine kinase binding	8.41E-04
25	GO:0033612: receptor serine/threonine kinase binding	9.21E-04
26	GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity	9.97E-04
27	GO:0015189: L-lysine transmembrane transporter activity	9.97E-04
28	GO:0017089: glycolipid transporter activity	9.97E-04
29	GO:0019201: nucleotide kinase activity	9.97E-04
30	GO:0004445: inositol-polyphosphate 5-phosphatase activity	9.97E-04
31	GO:0015181: arginine transmembrane transporter activity	9.97E-04
32	GO:0005509: calcium ion binding	1.20E-03
33	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.32E-03
34	GO:0051861: glycolipid binding	1.32E-03
35	GO:0005313: L-glutamate transmembrane transporter activity	1.32E-03
36	GO:0010294: abscisic acid glucosyltransferase activity	1.68E-03
37	GO:0005459: UDP-galactose transmembrane transporter activity	1.68E-03
38	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	2.07E-03
39	GO:0035252: UDP-xylosyltransferase activity	2.07E-03
40	GO:0004605: phosphatidate cytidylyltransferase activity	2.07E-03
41	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.07E-03
42	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.34E-03
43	GO:0019900: kinase binding	2.49E-03
44	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.49E-03
45	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.49E-03
46	GO:0004017: adenylate kinase activity	2.49E-03
47	GO:0004842: ubiquitin-protein transferase activity	2.67E-03
48	GO:0004620: phospholipase activity	2.93E-03
49	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	2.93E-03
50	GO:0005516: calmodulin binding	3.07E-03
51	GO:0052747: sinapyl alcohol dehydrogenase activity	3.40E-03
52	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.40E-03
53	GO:0015238: drug transmembrane transporter activity	3.59E-03
54	GO:0004630: phospholipase D activity	3.88E-03
55	GO:0008271: secondary active sulfate transmembrane transporter activity	3.88E-03
56	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.88E-03
57	GO:0004430: 1-phosphatidylinositol 4-kinase activity	3.88E-03
58	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.95E-03
59	GO:0008417: fucosyltransferase activity	4.40E-03
60	GO:0071949: FAD binding	4.40E-03
61	GO:0005515: protein binding	4.48E-03
62	GO:0015174: basic amino acid transmembrane transporter activity	4.93E-03
63	GO:0004568: chitinase activity	5.48E-03
64	GO:0008559: xenobiotic-transporting ATPase activity	6.06E-03
65	GO:0047372: acylglycerol lipase activity	6.06E-03
66	GO:0043531: ADP binding	6.31E-03
67	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.66E-03
68	GO:0015116: sulfate transmembrane transporter activity	6.66E-03
69	GO:0008378: galactosyltransferase activity	6.66E-03
70	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	6.66E-03
71	GO:0016298: lipase activity	7.77E-03
72	GO:0008061: chitin binding	8.57E-03
73	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.14E-02
74	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.73E-02
75	GO:0015297: antiporter activity	1.77E-02
76	GO:0019901: protein kinase binding	1.79E-02
77	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.88E-02
78	GO:0004197: cysteine-type endopeptidase activity	1.97E-02
79	GO:0005215: transporter activity	2.11E-02
80	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.64E-02
81	GO:0004721: phosphoprotein phosphatase activity	2.74E-02
82	GO:0004683: calmodulin-dependent protein kinase activity	2.74E-02
83	GO:0004806: triglyceride lipase activity	2.74E-02
84	GO:0000287: magnesium ion binding	2.82E-02
85	GO:0050660: flavin adenine dinucleotide binding	3.32E-02
86	GO:0000149: SNARE binding	3.71E-02
87	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.71E-02
88	GO:0050661: NADP binding	3.83E-02
89	GO:0005484: SNAP receptor activity	4.18E-02
90	GO:0004871: signal transducer activity	4.45E-02
91	GO:0015293: symporter activity	4.54E-02
92	GO:0005198: structural molecule activity	4.54E-02
93	GO:0004722: protein serine/threonine phosphatase activity	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	4.90E-09
2	GO:0005901: caveola	4.29E-04
3	GO:0030176: integral component of endoplasmic reticulum membrane	6.22E-04
4	GO:0016021: integral component of membrane	1.80E-03
5	GO:0030173: integral component of Golgi membrane	2.49E-03
6	GO:0005887: integral component of plasma membrane	4.17E-03
7	GO:0030125: clathrin vesicle coat	5.48E-03
8	GO:0016020: membrane	6.51E-03
9	GO:0005795: Golgi stack	8.57E-03
10	GO:0012505: endomembrane system	1.04E-02
11	GO:0043231: intracellular membrane-bounded organelle	1.37E-02
12	GO:0000145: exocyst	1.97E-02
13	GO:0032580: Golgi cisterna membrane	2.15E-02
14	GO:0000325: plant-type vacuole	3.27E-02
15	GO:0031201: SNARE complex	3.94E-02
16	GO:0090406: pollen tube	4.18E-02