co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G39140

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009852: auxin catabolic process	4.83E-06
2	GO:0006421: asparaginyl-tRNA aminoacylation	2.46E-05
3	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	2.46E-05
4	GO:0010971: positive regulation of G2/M transition of mitotic cell cycle	3.83E-05
5	GO:1903830: magnesium ion transmembrane transport	5.40E-05
6	GO:0015693: magnesium ion transport	1.32E-04
7	GO:0000338: protein deneddylation	1.32E-04
8	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.32E-04
9	GO:0006506: GPI anchor biosynthetic process	1.54E-04
10	GO:0006896: Golgi to vacuole transport	2.53E-04
11	GO:0015770: sucrose transport	2.79E-04
12	GO:0051260: protein homooligomerization	5.09E-04
13	GO:0010431: seed maturation	5.09E-04
14	GO:0051028: mRNA transport	6.34E-04
15	GO:0042147: retrograde transport, endosome to Golgi	6.34E-04
16	GO:0000413: protein peptidyl-prolyl isomerization	6.67E-04
17	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	8.02E-04
18	GO:0010252: auxin homeostasis	9.07E-04
19	GO:0006499: N-terminal protein myristoylation	1.28E-03
20	GO:0010043: response to zinc ion	1.32E-03
21	GO:0030001: metal ion transport	1.53E-03
22	GO:0009640: photomorphogenesis	1.66E-03
23	GO:0009585: red, far-red light phototransduction	2.02E-03
24	GO:0045454: cell redox homeostasis	6.55E-03
25	GO:0048364: root development	7.80E-03
26	GO:0006457: protein folding	1.36E-02
27	GO:0006511: ubiquitin-dependent protein catabolic process	1.41E-02
28	GO:0006414: translational elongation	1.50E-02
29	GO:0015031: protein transport	2.22E-02
30	GO:0046686: response to cadmium ion	2.57E-02
31	GO:0007275: multicellular organism development	3.03E-02
32	GO:0009793: embryo development ending in seed dormancy	3.40E-02

Rank	GO Term	Adjusted P value
1	GO:0004816: asparagine-tRNA ligase activity	2.46E-05
2	GO:0008430: selenium binding	2.46E-05
3	GO:0050302: indole-3-acetaldehyde oxidase activity	5.40E-05
4	GO:0016004: phospholipase activator activity	5.40E-05
5	GO:0019905: syntaxin binding	5.40E-05
6	GO:0008312: 7S RNA binding	1.54E-04
7	GO:0008515: sucrose transmembrane transporter activity	2.79E-04
8	GO:0015095: magnesium ion transmembrane transporter activity	3.33E-04
9	GO:0051119: sugar transmembrane transporter activity	3.90E-04
10	GO:0046873: metal ion transmembrane transporter activity	7.00E-04
11	GO:0051213: dioxygenase activity	1.01E-03
12	GO:0003746: translation elongation factor activity	1.40E-03
13	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.40E-03
14	GO:0005525: GTP binding	1.43E-03
15	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.84E-03
16	GO:0015035: protein disulfide oxidoreductase activity	2.61E-03
17	GO:0003924: GTPase activity	7.58E-03
18	GO:0009055: electron carrier activity	7.96E-03
19	GO:0000166: nucleotide binding	1.13E-02
20	GO:0005507: copper ion binding	1.46E-02
21	GO:0005515: protein binding	1.58E-02
22	GO:0003729: mRNA binding	2.48E-02

Rank	GO Term	Adjusted P value
1	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.78E-04
2	GO:0008180: COP9 signalosome	2.02E-04
3	GO:0005643: nuclear pore	1.20E-03
4	GO:0005829: cytosol	1.25E-03
5	GO:0005635: nuclear envelope	2.12E-03
6	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	5.32E-03
7	GO:0005773: vacuole	9.16E-03
8	GO:0005887: integral component of plasma membrane	9.38E-03
9	GO:0009506: plasmodesma	2.30E-02
10	GO:0016020: membrane	2.31E-02
11	GO:0005789: endoplasmic reticulum membrane	2.53E-02
12	GO:0005737: cytoplasm	3.03E-02
13	GO:0005794: Golgi apparatus	3.12E-02
14	GO:0005618: cell wall	5.00E-02