co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G37220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045014: negative regulation of transcription by glucose	0.00E+00
2	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
3	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
4	GO:0080127: fruit septum development	0.00E+00
5	GO:0051013: microtubule severing	4.48E-04
6	GO:0034757: negative regulation of iron ion transport	4.48E-04
7	GO:0010726: positive regulation of hydrogen peroxide metabolic process	4.48E-04
8	GO:0006438: valyl-tRNA aminoacylation	4.48E-04
9	GO:0032958: inositol phosphate biosynthetic process	4.48E-04
10	GO:0046620: regulation of organ growth	5.46E-04
11	GO:0009926: auxin polar transport	5.84E-04
12	GO:0000373: Group II intron splicing	7.98E-04
13	GO:0010024: phytochromobilin biosynthetic process	9.67E-04
14	GO:0043039: tRNA aminoacylation	9.67E-04
15	GO:0006650: glycerophospholipid metabolic process	9.67E-04
16	GO:0061062: regulation of nematode larval development	9.67E-04
17	GO:0010271: regulation of chlorophyll catabolic process	9.67E-04
18	GO:0001736: establishment of planar polarity	9.67E-04
19	GO:0009786: regulation of asymmetric cell division	9.67E-04
20	GO:0048829: root cap development	1.09E-03
21	GO:0005983: starch catabolic process	1.44E-03
22	GO:0045037: protein import into chloroplast stroma	1.44E-03
23	GO:0071398: cellular response to fatty acid	1.57E-03
24	GO:0030029: actin filament-based process	1.57E-03
25	GO:0090506: axillary shoot meristem initiation	1.57E-03
26	GO:0080117: secondary growth	1.57E-03
27	GO:0051604: protein maturation	1.57E-03
28	GO:0009825: multidimensional cell growth	2.07E-03
29	GO:0006020: inositol metabolic process	2.28E-03
30	GO:0051513: regulation of monopolar cell growth	2.28E-03
31	GO:0051639: actin filament network formation	2.28E-03
32	GO:0034059: response to anoxia	2.28E-03
33	GO:0044211: CTP salvage	2.28E-03
34	GO:0007276: gamete generation	2.28E-03
35	GO:0006424: glutamyl-tRNA aminoacylation	2.28E-03
36	GO:2000904: regulation of starch metabolic process	2.28E-03
37	GO:0010321: regulation of vegetative phase change	2.28E-03
38	GO:0051017: actin filament bundle assembly	2.56E-03
39	GO:0009734: auxin-activated signaling pathway	2.69E-03
40	GO:0009733: response to auxin	2.70E-03
41	GO:0030001: metal ion transport	2.95E-03
42	GO:0051764: actin crosslink formation	3.06E-03
43	GO:0044206: UMP salvage	3.06E-03
44	GO:0042991: transcription factor import into nucleus	3.06E-03
45	GO:0009956: radial pattern formation	3.06E-03
46	GO:0009107: lipoate biosynthetic process	3.93E-03
47	GO:0009696: salicylic acid metabolic process	3.93E-03
48	GO:0048497: maintenance of floral organ identity	3.93E-03
49	GO:0042127: regulation of cell proliferation	4.04E-03
50	GO:0010087: phloem or xylem histogenesis	4.73E-03
51	GO:0010358: leaf shaping	4.86E-03
52	GO:0016554: cytidine to uridine editing	4.86E-03
53	GO:0006206: pyrimidine nucleobase metabolic process	4.86E-03
54	GO:0009913: epidermal cell differentiation	4.86E-03
55	GO:1902456: regulation of stomatal opening	4.86E-03
56	GO:0048831: regulation of shoot system development	4.86E-03
57	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	4.86E-03
58	GO:0003006: developmental process involved in reproduction	4.86E-03
59	GO:0010942: positive regulation of cell death	4.86E-03
60	GO:0009736: cytokinin-activated signaling pathway	5.05E-03
61	GO:0009741: response to brassinosteroid	5.11E-03
62	GO:0009958: positive gravitropism	5.11E-03
63	GO:0010305: leaf vascular tissue pattern formation	5.11E-03
64	GO:0010019: chloroplast-nucleus signaling pathway	5.87E-03
65	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	5.87E-03
66	GO:0006694: steroid biosynthetic process	5.87E-03
67	GO:0048509: regulation of meristem development	5.87E-03
68	GO:0030488: tRNA methylation	5.87E-03
69	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	5.87E-03
70	GO:0048825: cotyledon development	5.89E-03
71	GO:0071554: cell wall organization or biogenesis	6.31E-03
72	GO:0010583: response to cyclopentenone	6.75E-03
73	GO:0031047: gene silencing by RNA	6.75E-03
74	GO:1900056: negative regulation of leaf senescence	6.93E-03
75	GO:0000082: G1/S transition of mitotic cell cycle	6.93E-03
76	GO:0010444: guard mother cell differentiation	6.93E-03
77	GO:0009231: riboflavin biosynthetic process	8.07E-03
78	GO:0010492: maintenance of shoot apical meristem identity	8.07E-03
79	GO:0051726: regulation of cell cycle	8.54E-03
80	GO:0007186: G-protein coupled receptor signaling pathway	9.27E-03
81	GO:0010497: plasmodesmata-mediated intercellular transport	9.27E-03
82	GO:0009657: plastid organization	9.27E-03
83	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.03E-02
84	GO:0009056: catabolic process	1.05E-02
85	GO:0048507: meristem development	1.05E-02
86	GO:0046916: cellular transition metal ion homeostasis	1.05E-02
87	GO:0048589: developmental growth	1.05E-02
88	GO:0005982: starch metabolic process	1.18E-02
89	GO:0006779: porphyrin-containing compound biosynthetic process	1.18E-02
90	GO:1900865: chloroplast RNA modification	1.18E-02
91	GO:0016571: histone methylation	1.18E-02
92	GO:0016573: histone acetylation	1.18E-02
93	GO:0009817: defense response to fungus, incompatible interaction	1.20E-02
94	GO:0000160: phosphorelay signal transduction system	1.26E-02
95	GO:0010311: lateral root formation	1.26E-02
96	GO:0009641: shade avoidance	1.32E-02
97	GO:0016441: posttranscriptional gene silencing	1.32E-02
98	GO:0006949: syncytium formation	1.32E-02
99	GO:0006782: protoporphyrinogen IX biosynthetic process	1.32E-02
100	GO:0045892: negative regulation of transcription, DNA-templated	1.32E-02
101	GO:0006468: protein phosphorylation	1.37E-02
102	GO:0008285: negative regulation of cell proliferation	1.46E-02
103	GO:0016485: protein processing	1.46E-02
104	GO:0048765: root hair cell differentiation	1.46E-02
105	GO:0040008: regulation of growth	1.50E-02
106	GO:0009867: jasmonic acid mediated signaling pathway	1.52E-02
107	GO:0010582: floral meristem determinacy	1.61E-02
108	GO:0010152: pollen maturation	1.61E-02
109	GO:0009725: response to hormone	1.77E-02
110	GO:0010588: cotyledon vascular tissue pattern formation	1.77E-02
111	GO:0010102: lateral root morphogenesis	1.77E-02
112	GO:0030048: actin filament-based movement	1.77E-02
113	GO:0009691: cytokinin biosynthetic process	1.77E-02
114	GO:0009887: animal organ morphogenesis	1.92E-02
115	GO:0010540: basipetal auxin transport	1.92E-02
116	GO:0009266: response to temperature stimulus	1.92E-02
117	GO:0048467: gynoecium development	1.92E-02
118	GO:0010020: chloroplast fission	1.92E-02
119	GO:0009933: meristem structural organization	1.92E-02
120	GO:0010207: photosystem II assembly	1.92E-02
121	GO:0010223: secondary shoot formation	1.92E-02
122	GO:0009744: response to sucrose	1.97E-02
123	GO:0009969: xyloglucan biosynthetic process	2.09E-02
124	GO:0080188: RNA-directed DNA methylation	2.09E-02
125	GO:0006863: purine nucleobase transport	2.26E-02
126	GO:0005992: trehalose biosynthetic process	2.43E-02
127	GO:0006338: chromatin remodeling	2.43E-02
128	GO:0019953: sexual reproduction	2.61E-02
129	GO:0006418: tRNA aminoacylation for protein translation	2.61E-02
130	GO:0043622: cortical microtubule organization	2.61E-02
131	GO:0006306: DNA methylation	2.79E-02
132	GO:0003333: amino acid transmembrane transport	2.79E-02
133	GO:0009909: regulation of flower development	2.94E-02
134	GO:0007005: mitochondrion organization	2.97E-02
135	GO:0009693: ethylene biosynthetic process	3.16E-02
136	GO:0071215: cellular response to abscisic acid stimulus	3.16E-02
137	GO:0010082: regulation of root meristem growth	3.16E-02
138	GO:0001944: vasculature development	3.16E-02
139	GO:0048367: shoot system development	3.24E-02
140	GO:0048443: stamen development	3.36E-02
141	GO:0006284: base-excision repair	3.36E-02
142	GO:0010091: trichome branching	3.36E-02
143	GO:0070417: cellular response to cold	3.56E-02
144	GO:0010118: stomatal movement	3.76E-02
145	GO:0000226: microtubule cytoskeleton organization	3.76E-02
146	GO:0000271: polysaccharide biosynthetic process	3.76E-02
147	GO:0080022: primary root development	3.76E-02
148	GO:0008033: tRNA processing	3.76E-02
149	GO:0010501: RNA secondary structure unwinding	3.76E-02
150	GO:0009624: response to nematode	3.77E-02
151	GO:0010268: brassinosteroid homeostasis	3.96E-02
152	GO:0045489: pectin biosynthetic process	3.96E-02
153	GO:0010182: sugar mediated signaling pathway	3.96E-02
154	GO:0048544: recognition of pollen	4.17E-02
155	GO:0007018: microtubule-based movement	4.17E-02
156	GO:0008654: phospholipid biosynthetic process	4.38E-02
157	GO:0071555: cell wall organization	4.44E-02
158	GO:0016132: brassinosteroid biosynthetic process	4.60E-02
159	GO:0002229: defense response to oomycetes	4.60E-02
160	GO:0051301: cell division	4.64E-02
161	GO:0032502: developmental process	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity	0.00E+00
2	GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity	0.00E+00
3	GO:0071633: dihydroceramidase activity	0.00E+00
4	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
5	GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	0.00E+00
6	GO:0010011: auxin binding	1.15E-04
7	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	4.48E-04
8	GO:0010012: steroid 22-alpha hydroxylase activity	4.48E-04
9	GO:0000829: inositol heptakisphosphate kinase activity	4.48E-04
10	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	4.48E-04
11	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	4.48E-04
12	GO:0000828: inositol hexakisphosphate kinase activity	4.48E-04
13	GO:0052381: tRNA dimethylallyltransferase activity	4.48E-04
14	GO:0004818: glutamate-tRNA ligase activity	4.48E-04
15	GO:0008568: microtubule-severing ATPase activity	4.48E-04
16	GO:0019203: carbohydrate phosphatase activity	4.48E-04
17	GO:0004832: valine-tRNA ligase activity	4.48E-04
18	GO:0010296: prenylcysteine methylesterase activity	9.67E-04
19	GO:0016415: octanoyltransferase activity	9.67E-04
20	GO:0008805: carbon-monoxide oxygenase activity	9.67E-04
21	GO:0009884: cytokinin receptor activity	9.67E-04
22	GO:0019156: isoamylase activity	9.67E-04
23	GO:0017118: lipoyltransferase activity	9.67E-04
24	GO:0003913: DNA photolyase activity	1.57E-03
25	GO:0005034: osmosensor activity	1.57E-03
26	GO:0080031: methyl salicylate esterase activity	2.28E-03
27	GO:0001872: (1->3)-beta-D-glucan binding	2.28E-03
28	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	2.28E-03
29	GO:0004845: uracil phosphoribosyltransferase activity	3.06E-03
30	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	3.06E-03
31	GO:0010328: auxin influx transmembrane transporter activity	3.06E-03
32	GO:0019199: transmembrane receptor protein kinase activity	3.06E-03
33	GO:0008725: DNA-3-methyladenine glycosylase activity	3.93E-03
34	GO:0008374: O-acyltransferase activity	3.93E-03
35	GO:0005471: ATP:ADP antiporter activity	3.93E-03
36	GO:0080030: methyl indole-3-acetate esterase activity	4.86E-03
37	GO:0004709: MAP kinase kinase kinase activity	4.86E-03
38	GO:0004556: alpha-amylase activity	4.86E-03
39	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	5.11E-03
40	GO:0016301: kinase activity	5.63E-03
41	GO:0016832: aldehyde-lyase activity	5.87E-03
42	GO:0004849: uridine kinase activity	5.87E-03
43	GO:0019900: kinase binding	5.87E-03
44	GO:0005515: protein binding	6.89E-03
45	GO:0009881: photoreceptor activity	6.93E-03
46	GO:0051015: actin filament binding	7.20E-03
47	GO:0003779: actin binding	7.63E-03
48	GO:0016413: O-acetyltransferase activity	8.64E-03
49	GO:0003724: RNA helicase activity	9.27E-03
50	GO:0046914: transition metal ion binding	9.27E-03
51	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.05E-02
52	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.05E-02
53	GO:0030247: polysaccharide binding	1.08E-02
54	GO:0008236: serine-type peptidase activity	1.14E-02
55	GO:0005096: GTPase activator activity	1.26E-02
56	GO:0004222: metalloendopeptidase activity	1.32E-02
57	GO:0004673: protein histidine kinase activity	1.32E-02
58	GO:0004805: trehalose-phosphatase activity	1.32E-02
59	GO:0004871: signal transducer activity	1.38E-02
60	GO:0042803: protein homodimerization activity	1.38E-02
61	GO:0008378: galactosyltransferase activity	1.61E-02
62	GO:0000049: tRNA binding	1.61E-02
63	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.66E-02
64	GO:0005524: ATP binding	1.74E-02
65	GO:0000155: phosphorelay sensor kinase activity	1.77E-02
66	GO:0004674: protein serine/threonine kinase activity	1.77E-02
67	GO:0003725: double-stranded RNA binding	1.77E-02
68	GO:0003774: motor activity	1.92E-02
69	GO:0003712: transcription cofactor activity	2.09E-02
70	GO:0043621: protein self-association	2.13E-02
71	GO:0042802: identical protein binding	2.16E-02
72	GO:0051536: iron-sulfur cluster binding	2.43E-02
73	GO:0031418: L-ascorbic acid binding	2.43E-02
74	GO:0043424: protein histidine kinase binding	2.61E-02
75	GO:0005345: purine nucleobase transmembrane transporter activity	2.61E-02
76	GO:0033612: receptor serine/threonine kinase binding	2.79E-02
77	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.97E-02
78	GO:0004672: protein kinase activity	3.44E-02
79	GO:0004812: aminoacyl-tRNA ligase activity	3.56E-02
80	GO:0043565: sequence-specific DNA binding	4.06E-02
81	GO:0019901: protein kinase binding	4.38E-02
82	GO:0004872: receptor activity	4.38E-02
83	GO:0016762: xyloglucan:xyloglucosyl transferase activity	4.60E-02
84	GO:0004518: nuclease activity	4.82E-02
85	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0035452: extrinsic component of plastid membrane	0.00E+00
3	GO:0000408: EKC/KEOPS complex	0.00E+00
4	GO:0031224: intrinsic component of membrane	0.00E+00
5	GO:0009349: riboflavin synthase complex	0.00E+00
6	GO:0009986: cell surface	4.37E-04
7	GO:0009569: chloroplast starch grain	9.67E-04
8	GO:0030139: endocytic vesicle	1.57E-03
9	GO:0032585: multivesicular body membrane	2.28E-03
10	GO:0032432: actin filament bundle	2.28E-03
11	GO:0009526: plastid envelope	3.06E-03
12	GO:0055035: plastid thylakoid membrane	3.93E-03
13	GO:0009507: chloroplast	6.07E-03
14	GO:0009570: chloroplast stroma	8.46E-03
15	GO:0010494: cytoplasmic stress granule	1.05E-02
16	GO:0016459: myosin complex	1.32E-02
17	GO:0005884: actin filament	1.46E-02
18	GO:0030095: chloroplast photosystem II	1.92E-02
19	GO:0000419: DNA-directed RNA polymerase V complex	2.26E-02
20	GO:0046658: anchored component of plasma membrane	2.27E-02
21	GO:0009654: photosystem II oxygen evolving complex	2.61E-02
22	GO:0015629: actin cytoskeleton	3.16E-02
23	GO:0009941: chloroplast envelope	3.35E-02
24	GO:0005871: kinesin complex	3.56E-02
25	GO:0009706: chloroplast inner membrane	3.77E-02
26	GO:0019898: extrinsic component of membrane	4.38E-02
27	GO:0031965: nuclear membrane	4.38E-02
28	GO:0005623: cell	4.84E-02