co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G37080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032206: positive regulation of telomere maintenance	0.00E+00
2	GO:0046486: glycerolipid metabolic process	0.00E+00
3	GO:0006907: pinocytosis	0.00E+00
4	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
5	GO:0019685: photosynthesis, dark reaction	0.00E+00
6	GO:0044154: histone H3-K14 acetylation	0.00E+00
7	GO:0045014: negative regulation of transcription by glucose	0.00E+00
8	GO:0045176: apical protein localization	0.00E+00
9	GO:0000372: Group I intron splicing	0.00E+00
10	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
11	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
12	GO:0043972: histone H3-K23 acetylation	0.00E+00
13	GO:0080127: fruit septum development	0.00E+00
14	GO:0032212: positive regulation of telomere maintenance via telomerase	0.00E+00
15	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
16	GO:0009926: auxin polar transport	7.93E-05
17	GO:0046620: regulation of organ growth	9.20E-05
18	GO:0000373: Group II intron splicing	1.67E-04
19	GO:0010583: response to cyclopentenone	4.71E-04
20	GO:0043087: regulation of GTPase activity	8.29E-04
21	GO:0043609: regulation of carbon utilization	8.29E-04
22	GO:0006436: tryptophanyl-tRNA aminoacylation	8.29E-04
23	GO:0000066: mitochondrial ornithine transport	8.29E-04
24	GO:0051013: microtubule severing	8.29E-04
25	GO:0034757: negative regulation of iron ion transport	8.29E-04
26	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	8.29E-04
27	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	8.29E-04
28	GO:0043971: histone H3-K18 acetylation	8.29E-04
29	GO:0019478: D-amino acid catabolic process	8.29E-04
30	GO:0010070: zygote asymmetric cell division	8.29E-04
31	GO:0009451: RNA modification	1.16E-03
32	GO:0009793: embryo development ending in seed dormancy	1.30E-03
33	GO:0071482: cellular response to light stimulus	1.64E-03
34	GO:0007186: G-protein coupled receptor signaling pathway	1.64E-03
35	GO:0001736: establishment of planar polarity	1.80E-03
36	GO:0009786: regulation of asymmetric cell division	1.80E-03
37	GO:0043039: tRNA aminoacylation	1.80E-03
38	GO:0010069: zygote asymmetric cytokinesis in embryo sac	1.80E-03
39	GO:0061062: regulation of nematode larval development	1.80E-03
40	GO:0010271: regulation of chlorophyll catabolic process	1.80E-03
41	GO:0006650: glycerophospholipid metabolic process	1.80E-03
42	GO:0009958: positive gravitropism	2.05E-03
43	GO:0009734: auxin-activated signaling pathway	2.09E-03
44	GO:0009658: chloroplast organization	2.66E-03
45	GO:0048829: root cap development	2.74E-03
46	GO:0042780: tRNA 3'-end processing	2.98E-03
47	GO:0030029: actin filament-based process	2.98E-03
48	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	2.98E-03
49	GO:0045910: negative regulation of DNA recombination	2.98E-03
50	GO:0090506: axillary shoot meristem initiation	2.98E-03
51	GO:0006000: fructose metabolic process	2.98E-03
52	GO:0046168: glycerol-3-phosphate catabolic process	2.98E-03
53	GO:0080117: secondary growth	2.98E-03
54	GO:0009416: response to light stimulus	3.64E-03
55	GO:0045037: protein import into chloroplast stroma	3.65E-03
56	GO:0010582: floral meristem determinacy	3.65E-03
57	GO:2001141: regulation of RNA biosynthetic process	4.34E-03
58	GO:0045017: glycerolipid biosynthetic process	4.34E-03
59	GO:0051513: regulation of monopolar cell growth	4.34E-03
60	GO:0051639: actin filament network formation	4.34E-03
61	GO:0034059: response to anoxia	4.34E-03
62	GO:0010239: chloroplast mRNA processing	4.34E-03
63	GO:0044211: CTP salvage	4.34E-03
64	GO:0007276: gamete generation	4.34E-03
65	GO:0006072: glycerol-3-phosphate metabolic process	4.34E-03
66	GO:0009800: cinnamic acid biosynthetic process	4.34E-03
67	GO:2000904: regulation of starch metabolic process	4.34E-03
68	GO:0009733: response to auxin	4.36E-03
69	GO:0010540: basipetal auxin transport	4.70E-03
70	GO:0009825: multidimensional cell growth	5.27E-03
71	GO:0080188: RNA-directed DNA methylation	5.27E-03
72	GO:0009956: radial pattern formation	5.87E-03
73	GO:0051764: actin crosslink formation	5.87E-03
74	GO:0015846: polyamine transport	5.87E-03
75	GO:0006021: inositol biosynthetic process	5.87E-03
76	GO:0044206: UMP salvage	5.87E-03
77	GO:0006863: purine nucleobase transport	5.89E-03
78	GO:0005992: trehalose biosynthetic process	6.55E-03
79	GO:0051017: actin filament bundle assembly	6.55E-03
80	GO:0006418: tRNA aminoacylation for protein translation	7.24E-03
81	GO:0009107: lipoate biosynthetic process	7.55E-03
82	GO:0010158: abaxial cell fate specification	7.55E-03
83	GO:0080110: sporopollenin biosynthetic process	7.55E-03
84	GO:0009696: salicylic acid metabolic process	7.55E-03
85	GO:0045487: gibberellin catabolic process	7.55E-03
86	GO:0048827: phyllome development	9.39E-03
87	GO:0016554: cytidine to uridine editing	9.39E-03
88	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	9.39E-03
89	GO:0048831: regulation of shoot system development	9.39E-03
90	GO:0006559: L-phenylalanine catabolic process	9.39E-03
91	GO:0003006: developmental process involved in reproduction	9.39E-03
92	GO:0006206: pyrimidine nucleobase metabolic process	9.39E-03
93	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	9.39E-03
94	GO:0009686: gibberellin biosynthetic process	9.55E-03
95	GO:0006284: base-excision repair	1.04E-02
96	GO:0042127: regulation of cell proliferation	1.04E-02
97	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.14E-02
98	GO:0009942: longitudinal axis specification	1.14E-02
99	GO:0048509: regulation of meristem development	1.14E-02
100	GO:0042546: cell wall biogenesis	1.21E-02
101	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.35E-02
102	GO:0006401: RNA catabolic process	1.35E-02
103	GO:0009610: response to symbiotic fungus	1.35E-02
104	GO:0006955: immune response	1.35E-02
105	GO:0010050: vegetative phase change	1.35E-02
106	GO:0010098: suspensor development	1.35E-02
107	GO:0010444: guard mother cell differentiation	1.35E-02
108	GO:0000082: G1/S transition of mitotic cell cycle	1.35E-02
109	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.40E-02
110	GO:0010492: maintenance of shoot apical meristem identity	1.58E-02
111	GO:0000105: histidine biosynthetic process	1.58E-02
112	GO:0006402: mRNA catabolic process	1.58E-02
113	GO:0009850: auxin metabolic process	1.58E-02
114	GO:0006353: DNA-templated transcription, termination	1.58E-02
115	GO:0002229: defense response to oomycetes	1.63E-02
116	GO:0007389: pattern specification process	1.81E-02
117	GO:0044030: regulation of DNA methylation	1.81E-02
118	GO:0009932: cell tip growth	1.81E-02
119	GO:0006002: fructose 6-phosphate metabolic process	1.81E-02
120	GO:0010052: guard cell differentiation	1.81E-02
121	GO:0009657: plastid organization	1.81E-02
122	GO:0032544: plastid translation	1.81E-02
123	GO:0045892: negative regulation of transcription, DNA-templated	1.84E-02
124	GO:0009639: response to red or far red light	1.99E-02
125	GO:0048589: developmental growth	2.06E-02
126	GO:0009056: catabolic process	2.06E-02
127	GO:0006098: pentose-phosphate shunt	2.06E-02
128	GO:0046916: cellular transition metal ion homeostasis	2.06E-02
129	GO:0048507: meristem development	2.06E-02
130	GO:0016573: histone acetylation	2.32E-02
131	GO:0000723: telomere maintenance	2.32E-02
132	GO:0042761: very long-chain fatty acid biosynthetic process	2.32E-02
133	GO:0010018: far-red light signaling pathway	2.32E-02
134	GO:1900865: chloroplast RNA modification	2.32E-02
135	GO:0016571: histone methylation	2.32E-02
136	GO:0008202: steroid metabolic process	2.32E-02
137	GO:0009641: shade avoidance	2.60E-02
138	GO:0006298: mismatch repair	2.60E-02
139	GO:0010192: mucilage biosynthetic process	2.60E-02
140	GO:0006782: protoporphyrinogen IX biosynthetic process	2.60E-02
141	GO:0019538: protein metabolic process	2.60E-02
142	GO:0006535: cysteine biosynthetic process from serine	2.60E-02
143	GO:0009624: response to nematode	2.63E-02
144	GO:0009627: systemic acquired resistance	2.65E-02
145	GO:0010411: xyloglucan metabolic process	2.80E-02
146	GO:0009750: response to fructose	2.88E-02
147	GO:0016485: protein processing	2.88E-02
148	GO:0048765: root hair cell differentiation	2.88E-02
149	GO:0008285: negative regulation of cell proliferation	2.88E-02
150	GO:0006352: DNA-templated transcription, initiation	2.88E-02
151	GO:0006790: sulfur compound metabolic process	3.17E-02
152	GO:0005983: starch catabolic process	3.17E-02
153	GO:0010152: pollen maturation	3.17E-02
154	GO:0000160: phosphorelay signal transduction system	3.26E-02
155	GO:0009832: plant-type cell wall biogenesis	3.26E-02
156	GO:0010311: lateral root formation	3.26E-02
157	GO:0006499: N-terminal protein myristoylation	3.42E-02
158	GO:2000028: regulation of photoperiodism, flowering	3.48E-02
159	GO:0010229: inflorescence development	3.48E-02
160	GO:0006094: gluconeogenesis	3.48E-02
161	GO:0010102: lateral root morphogenesis	3.48E-02
162	GO:0007568: aging	3.59E-02
163	GO:0010223: secondary shoot formation	3.79E-02
164	GO:0009887: animal organ morphogenesis	3.79E-02
165	GO:0009266: response to temperature stimulus	3.79E-02
166	GO:0048467: gynoecium development	3.79E-02
167	GO:0010207: photosystem II assembly	3.79E-02
168	GO:0010020: chloroplast fission	3.79E-02
169	GO:0009933: meristem structural organization	3.79E-02
170	GO:0046854: phosphatidylinositol phosphorylation	4.11E-02
171	GO:0010053: root epidermal cell differentiation	4.11E-02
172	GO:0071555: cell wall organization	4.31E-02
173	GO:0009833: plant-type primary cell wall biogenesis	4.44E-02
174	GO:0010025: wax biosynthetic process	4.44E-02
175	GO:0042753: positive regulation of circadian rhythm	4.44E-02
176	GO:0030001: metal ion transport	4.47E-02
177	GO:0019344: cysteine biosynthetic process	4.78E-02
178	GO:0030150: protein import into mitochondrial matrix	4.78E-02
179	GO:0006338: chromatin remodeling	4.78E-02
180	GO:0006289: nucleotide-excision repair	4.78E-02
181	GO:0040008: regulation of growth	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
2	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
3	GO:0008859: exoribonuclease II activity	0.00E+00
4	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
5	GO:0019808: polyamine binding	0.00E+00
6	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
7	GO:0004401: histidinol-phosphatase activity	0.00E+00
8	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
9	GO:0008805: carbon-monoxide oxygenase activity	2.87E-05
10	GO:0001872: (1->3)-beta-D-glucan binding	1.87E-04
11	GO:0010011: auxin binding	3.11E-04
12	GO:0008725: DNA-3-methyladenine glycosylase activity	4.64E-04
13	GO:0004830: tryptophan-tRNA ligase activity	8.29E-04
14	GO:0010347: L-galactose-1-phosphate phosphatase activity	8.29E-04
15	GO:0005227: calcium activated cation channel activity	8.29E-04
16	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	8.29E-04
17	GO:0042834: peptidoglycan binding	8.29E-04
18	GO:0004831: tyrosine-tRNA ligase activity	8.29E-04
19	GO:0005290: L-histidine transmembrane transporter activity	8.29E-04
20	GO:0008568: microtubule-severing ATPase activity	8.29E-04
21	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	8.29E-04
22	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	8.29E-04
23	GO:0003723: RNA binding	8.60E-04
24	GO:0050017: L-3-cyanoalanine synthase activity	1.80E-03
25	GO:0017118: lipoyltransferase activity	1.80E-03
26	GO:0045543: gibberellin 2-beta-dioxygenase activity	1.80E-03
27	GO:0005094: Rho GDP-dissociation inhibitor activity	1.80E-03
28	GO:0010296: prenylcysteine methylesterase activity	1.80E-03
29	GO:0016415: octanoyltransferase activity	1.80E-03
30	GO:0004047: aminomethyltransferase activity	1.80E-03
31	GO:0052832: inositol monophosphate 3-phosphatase activity	1.80E-03
32	GO:0004109: coproporphyrinogen oxidase activity	1.80E-03
33	GO:0008934: inositol monophosphate 1-phosphatase activity	1.80E-03
34	GO:0052833: inositol monophosphate 4-phosphatase activity	1.80E-03
35	GO:0000064: L-ornithine transmembrane transporter activity	1.80E-03
36	GO:0019156: isoamylase activity	1.80E-03
37	GO:0050736: O-malonyltransferase activity	1.80E-03
38	GO:0009884: cytokinin receptor activity	1.80E-03
39	GO:0004871: signal transducer activity	2.01E-03
40	GO:0004805: trehalose-phosphatase activity	2.74E-03
41	GO:0005034: osmosensor activity	2.98E-03
42	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	2.98E-03
43	GO:0016707: gibberellin 3-beta-dioxygenase activity	2.98E-03
44	GO:0045548: phenylalanine ammonia-lyase activity	2.98E-03
45	GO:0003913: DNA photolyase activity	2.98E-03
46	GO:0042781: 3'-tRNA processing endoribonuclease activity	2.98E-03
47	GO:0004519: endonuclease activity	3.47E-03
48	GO:0009982: pseudouridine synthase activity	4.15E-03
49	GO:0080031: methyl salicylate esterase activity	4.34E-03
50	GO:0015189: L-lysine transmembrane transporter activity	4.34E-03
51	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	4.34E-03
52	GO:0043047: single-stranded telomeric DNA binding	4.34E-03
53	GO:0015181: arginine transmembrane transporter activity	4.34E-03
54	GO:0001053: plastid sigma factor activity	5.87E-03
55	GO:0004845: uracil phosphoribosyltransferase activity	5.87E-03
56	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	5.87E-03
57	GO:0016987: sigma factor activity	5.87E-03
58	GO:0010328: auxin influx transmembrane transporter activity	5.87E-03
59	GO:0010385: double-stranded methylated DNA binding	5.87E-03
60	GO:0070628: proteasome binding	5.87E-03
61	GO:0019199: transmembrane receptor protein kinase activity	5.87E-03
62	GO:0004930: G-protein coupled receptor activity	5.87E-03
63	GO:0005096: GTPase activator activity	6.50E-03
64	GO:0004857: enzyme inhibitor activity	6.55E-03
65	GO:0043424: protein histidine kinase binding	7.24E-03
66	GO:0005345: purine nucleobase transmembrane transporter activity	7.24E-03
67	GO:0005471: ATP:ADP antiporter activity	7.55E-03
68	GO:2001070: starch binding	9.39E-03
69	GO:0030983: mismatched DNA binding	9.39E-03
70	GO:0080030: methyl indole-3-acetate esterase activity	9.39E-03
71	GO:0004332: fructose-bisphosphate aldolase activity	9.39E-03
72	GO:0004709: MAP kinase kinase kinase activity	9.39E-03
73	GO:0031593: polyubiquitin binding	9.39E-03
74	GO:0004556: alpha-amylase activity	9.39E-03
75	GO:0004462: lactoylglutathione lyase activity	9.39E-03
76	GO:0030570: pectate lyase activity	9.55E-03
77	GO:0004812: aminoacyl-tRNA ligase activity	1.13E-02
78	GO:0019900: kinase binding	1.14E-02
79	GO:0004124: cysteine synthase activity	1.14E-02
80	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.14E-02
81	GO:0016832: aldehyde-lyase activity	1.14E-02
82	GO:0004849: uridine kinase activity	1.14E-02
83	GO:0043621: protein self-association	1.27E-02
84	GO:0042162: telomeric DNA binding	1.35E-02
85	GO:0009881: photoreceptor activity	1.35E-02
86	GO:0019899: enzyme binding	1.35E-02
87	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.63E-02
88	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.80E-02
89	GO:0008142: oxysterol binding	1.81E-02
90	GO:0046914: transition metal ion binding	1.81E-02
91	GO:0051015: actin filament binding	1.87E-02
92	GO:0016759: cellulose synthase activity	1.99E-02
93	GO:0003684: damaged DNA binding	1.99E-02
94	GO:0009672: auxin:proton symporter activity	2.32E-02
95	GO:0015020: glucuronosyltransferase activity	2.60E-02
96	GO:0004673: protein histidine kinase activity	2.60E-02
97	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.80E-02
98	GO:0030247: polysaccharide binding	2.80E-02
99	GO:0008327: methyl-CpG binding	2.88E-02
100	GO:0004222: metalloendopeptidase activity	3.42E-02
101	GO:0000155: phosphorelay sensor kinase activity	3.48E-02
102	GO:0000175: 3'-5'-exoribonuclease activity	3.48E-02
103	GO:0010329: auxin efflux transmembrane transporter activity	3.48E-02
104	GO:0015266: protein channel activity	3.48E-02
105	GO:0016301: kinase activity	3.64E-02
106	GO:0008061: chitin binding	4.11E-02
107	GO:0003712: transcription cofactor activity	4.11E-02
108	GO:0004970: ionotropic glutamate receptor activity	4.11E-02
109	GO:0005217: intracellular ligand-gated ion channel activity	4.11E-02
110	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.29E-02
111	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.44E-02
112	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.44E-02
113	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.44E-02
114	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.75E-02
115	GO:0043130: ubiquitin binding	4.78E-02
116	GO:0008134: transcription factor binding	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0035452: extrinsic component of plastid membrane	0.00E+00
3	GO:0000408: EKC/KEOPS complex	0.00E+00
4	GO:0042597: periplasmic space	0.00E+00
5	GO:0009537: proplastid	0.00E+00
6	GO:0009507: chloroplast	2.79E-04
7	GO:0010370: perinucleolar chromocenter	8.29E-04
8	GO:0009986: cell surface	1.08E-03
9	GO:0009707: chloroplast outer membrane	1.14E-03
10	GO:0009513: etioplast	1.80E-03
11	GO:0009569: chloroplast starch grain	1.80E-03
12	GO:0005697: telomerase holoenzyme complex	1.80E-03
13	GO:0009509: chromoplast	2.98E-03
14	GO:0030139: endocytic vesicle	2.98E-03
15	GO:0030529: intracellular ribonucleoprotein complex	4.33E-03
16	GO:0032585: multivesicular body membrane	4.34E-03
17	GO:0032432: actin filament bundle	4.34E-03
18	GO:0009331: glycerol-3-phosphate dehydrogenase complex	4.34E-03
19	GO:0046658: anchored component of plasma membrane	6.87E-03
20	GO:0000178: exosome (RNase complex)	7.55E-03
21	GO:0009532: plastid stroma	7.97E-03
22	GO:0031305: integral component of mitochondrial inner membrane	1.58E-02
23	GO:0009501: amyloplast	1.58E-02
24	GO:0000784: nuclear chromosome, telomeric region	1.81E-02
25	GO:0005720: nuclear heterochromatin	2.06E-02
26	GO:0005886: plasma membrane	2.65E-02
27	GO:0005884: actin filament	2.88E-02
28	GO:0005578: proteinaceous extracellular matrix	3.48E-02
29	GO:0009574: preprophase band	3.48E-02
30	GO:0016602: CCAAT-binding factor complex	3.48E-02
31	GO:0030095: chloroplast photosystem II	3.79E-02
32	GO:0009570: chloroplast stroma	3.88E-02
33	GO:0005875: microtubule associated complex	4.44E-02
34	GO:0000419: DNA-directed RNA polymerase V complex	4.44E-02
35	GO:0031977: thylakoid lumen	4.66E-02