co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G36760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
2	GO:0006858: extracellular transport	0.00E+00
3	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
4	GO:0046686: response to cadmium ion	2.31E-05
5	GO:0009821: alkaloid biosynthetic process	4.72E-05
6	GO:0033306: phytol metabolic process	6.58E-05
7	GO:1901430: positive regulation of syringal lignin biosynthetic process	6.58E-05
8	GO:0046939: nucleotide phosphorylation	1.59E-04
9	GO:0006672: ceramide metabolic process	1.59E-04
10	GO:0010372: positive regulation of gibberellin biosynthetic process	1.59E-04
11	GO:1902000: homogentisate catabolic process	1.59E-04
12	GO:0043132: NAD transport	1.59E-04
13	GO:0044375: regulation of peroxisome size	2.69E-04
14	GO:0090630: activation of GTPase activity	2.69E-04
15	GO:0009072: aromatic amino acid family metabolic process	2.69E-04
16	GO:0055074: calcium ion homeostasis	2.69E-04
17	GO:0009058: biosynthetic process	3.73E-04
18	GO:0015858: nucleoside transport	3.90E-04
19	GO:0042744: hydrogen peroxide catabolic process	4.11E-04
20	GO:0009851: auxin biosynthetic process	4.26E-04
21	GO:1901657: glycosyl compound metabolic process	5.18E-04
22	GO:0006542: glutamine biosynthetic process	5.20E-04
23	GO:0006536: glutamate metabolic process	5.20E-04
24	GO:0006878: cellular copper ion homeostasis	5.20E-04
25	GO:0010150: leaf senescence	5.25E-04
26	GO:0009615: response to virus	6.52E-04
27	GO:0046283: anthocyanin-containing compound metabolic process	6.60E-04
28	GO:0006564: L-serine biosynthetic process	6.60E-04
29	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	8.06E-04
30	GO:0006561: proline biosynthetic process	8.06E-04
31	GO:0009228: thiamine biosynthetic process	8.06E-04
32	GO:0009407: toxin catabolic process	9.21E-04
33	GO:0009554: megasporogenesis	9.59E-04
34	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	9.59E-04
35	GO:0006099: tricarboxylic acid cycle	1.10E-03
36	GO:1900056: negative regulation of leaf senescence	1.12E-03
37	GO:0006102: isocitrate metabolic process	1.29E-03
38	GO:0006402: mRNA catabolic process	1.29E-03
39	GO:0015996: chlorophyll catabolic process	1.47E-03
40	GO:0007186: G-protein coupled receptor signaling pathway	1.47E-03
41	GO:0010120: camalexin biosynthetic process	1.47E-03
42	GO:0010204: defense response signaling pathway, resistance gene-independent	1.47E-03
43	GO:0019432: triglyceride biosynthetic process	1.65E-03
44	GO:0009751: response to salicylic acid	1.88E-03
45	GO:0042742: defense response to bacterium	1.99E-03
46	GO:0009688: abscisic acid biosynthetic process	2.05E-03
47	GO:0043069: negative regulation of programmed cell death	2.05E-03
48	GO:0052544: defense response by callose deposition in cell wall	2.26E-03
49	GO:0072593: reactive oxygen species metabolic process	2.26E-03
50	GO:0009620: response to fungus	2.31E-03
51	GO:0006790: sulfur compound metabolic process	2.48E-03
52	GO:0002213: defense response to insect	2.48E-03
53	GO:0016925: protein sumoylation	2.48E-03
54	GO:0009718: anthocyanin-containing compound biosynthetic process	2.70E-03
55	GO:0006807: nitrogen compound metabolic process	2.70E-03
56	GO:0015031: protein transport	2.86E-03
57	GO:0034605: cellular response to heat	2.93E-03
58	GO:0046854: phosphatidylinositol phosphorylation	3.16E-03
59	GO:0010167: response to nitrate	3.16E-03
60	GO:0000162: tryptophan biosynthetic process	3.40E-03
61	GO:0009735: response to cytokinin	3.53E-03
62	GO:0005992: trehalose biosynthetic process	3.65E-03
63	GO:0006874: cellular calcium ion homeostasis	3.90E-03
64	GO:0030433: ubiquitin-dependent ERAD pathway	4.43E-03
65	GO:0010227: floral organ abscission	4.70E-03
66	GO:0010089: xylem development	4.98E-03
67	GO:0009306: protein secretion	4.98E-03
68	GO:0051028: mRNA transport	5.26E-03
69	GO:0010118: stomatal movement	5.55E-03
70	GO:0006635: fatty acid beta-oxidation	6.76E-03
71	GO:0009630: gravitropism	7.08E-03
72	GO:0031047: gene silencing by RNA	7.08E-03
73	GO:0006914: autophagy	7.73E-03
74	GO:0009723: response to ethylene	7.74E-03
75	GO:0042128: nitrate assimilation	9.44E-03
76	GO:0006979: response to oxidative stress	9.76E-03
77	GO:0050832: defense response to fungus	1.04E-02
78	GO:0009813: flavonoid biosynthetic process	1.09E-02
79	GO:0006499: N-terminal protein myristoylation	1.13E-02
80	GO:0007568: aging	1.17E-02
81	GO:0009753: response to jasmonic acid	1.32E-02
82	GO:0006839: mitochondrial transport	1.36E-02
83	GO:0006897: endocytosis	1.40E-02
84	GO:0009636: response to toxic substance	1.62E-02
85	GO:0005975: carbohydrate metabolic process	1.64E-02
86	GO:0006855: drug transmembrane transport	1.66E-02
87	GO:0031347: regulation of defense response	1.70E-02
88	GO:0009664: plant-type cell wall organization	1.75E-02
89	GO:0042538: hyperosmotic salinity response	1.75E-02
90	GO:0009809: lignin biosynthetic process	1.84E-02
91	GO:0006096: glycolytic process	2.07E-02
92	GO:0009626: plant-type hypersensitive response	2.17E-02
93	GO:0009416: response to light stimulus	2.18E-02
94	GO:0009611: response to wounding	2.23E-02
95	GO:0009624: response to nematode	2.36E-02
96	GO:0055114: oxidation-reduction process	2.45E-02
97	GO:0055085: transmembrane transport	2.77E-02
98	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.78E-02
99	GO:0009739: response to gibberellin	3.78E-02
100	GO:0009651: response to salt stress	4.41E-02
101	GO:0009826: unidimensional cell growth	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
2	GO:0008418: protein-N-terminal asparagine amidohydrolase activity	0.00E+00
3	GO:0016508: long-chain-enoyl-CoA hydratase activity	0.00E+00
4	GO:0044610: FMN transmembrane transporter activity	0.00E+00
5	GO:0016844: strictosidine synthase activity	5.76E-05
6	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	6.58E-05
7	GO:0033984: indole-3-glycerol-phosphate lyase activity	6.58E-05
8	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	6.58E-05
9	GO:0019786: Atg8-specific protease activity	6.58E-05
10	GO:0048037: cofactor binding	6.58E-05
11	GO:0015230: FAD transmembrane transporter activity	6.58E-05
12	GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	6.58E-05
13	GO:0004364: glutathione transferase activity	9.75E-05
14	GO:0004601: peroxidase activity	1.01E-04
15	GO:0004776: succinate-CoA ligase (GDP-forming) activity	1.59E-04
16	GO:0004566: beta-glucuronidase activity	1.59E-04
17	GO:0015228: coenzyme A transmembrane transporter activity	1.59E-04
18	GO:0051724: NAD transporter activity	1.59E-04
19	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	1.59E-04
20	GO:0004775: succinate-CoA ligase (ADP-forming) activity	1.59E-04
21	GO:0019779: Atg8 activating enzyme activity	1.59E-04
22	GO:0019172: glyoxalase III activity	1.59E-04
23	GO:0008517: folic acid transporter activity	1.59E-04
24	GO:0052692: raffinose alpha-galactosidase activity	2.69E-04
25	GO:0004557: alpha-galactosidase activity	2.69E-04
26	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	2.69E-04
27	GO:0004165: dodecenoyl-CoA delta-isomerase activity	3.90E-04
28	GO:0004300: enoyl-CoA hydratase activity	3.90E-04
29	GO:0004351: glutamate decarboxylase activity	3.90E-04
30	GO:0019201: nucleotide kinase activity	3.90E-04
31	GO:0004449: isocitrate dehydrogenase (NAD+) activity	3.90E-04
32	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	3.90E-04
33	GO:0004834: tryptophan synthase activity	5.20E-04
34	GO:0004930: G-protein coupled receptor activity	5.20E-04
35	GO:0004031: aldehyde oxidase activity	5.20E-04
36	GO:0050302: indole-3-acetaldehyde oxidase activity	5.20E-04
37	GO:0019776: Atg8 ligase activity	5.20E-04
38	GO:0004356: glutamate-ammonia ligase activity	6.60E-04
39	GO:0080122: AMP transmembrane transporter activity	6.60E-04
40	GO:0031386: protein tag	6.60E-04
41	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	8.06E-04
42	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	8.06E-04
43	GO:0036402: proteasome-activating ATPase activity	8.06E-04
44	GO:0015217: ADP transmembrane transporter activity	9.59E-04
45	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	9.59E-04
46	GO:0004017: adenylate kinase activity	9.59E-04
47	GO:0004144: diacylglycerol O-acyltransferase activity	9.59E-04
48	GO:0005347: ATP transmembrane transporter activity	9.59E-04
49	GO:0030145: manganese ion binding	9.63E-04
50	GO:0008422: beta-glucosidase activity	1.14E-03
51	GO:0005507: copper ion binding	1.17E-03
52	GO:0030955: potassium ion binding	1.85E-03
53	GO:0004743: pyruvate kinase activity	1.85E-03
54	GO:0045735: nutrient reservoir activity	2.11E-03
55	GO:0008559: xenobiotic-transporting ATPase activity	2.26E-03
56	GO:0004521: endoribonuclease activity	2.48E-03
57	GO:0004022: alcohol dehydrogenase (NAD) activity	2.70E-03
58	GO:0005217: intracellular ligand-gated ion channel activity	3.16E-03
59	GO:0017025: TBP-class protein binding	3.16E-03
60	GO:0004970: ionotropic glutamate receptor activity	3.16E-03
61	GO:0030170: pyridoxal phosphate binding	3.50E-03
62	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	5.50E-03
63	GO:0005199: structural constituent of cell wall	5.85E-03
64	GO:0000287: magnesium ion binding	6.57E-03
65	GO:0016788: hydrolase activity, acting on ester bonds	6.82E-03
66	GO:0004518: nuclease activity	7.08E-03
67	GO:0102483: scopolin beta-glucosidase activity	9.79E-03
68	GO:0005096: GTPase activator activity	1.09E-02
69	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.17E-02
70	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.24E-02
71	GO:0046872: metal ion binding	1.46E-02
72	GO:0051537: 2 iron, 2 sulfur cluster binding	1.57E-02
73	GO:0051287: NAD binding	1.70E-02
74	GO:0020037: heme binding	1.72E-02
75	GO:0000166: nucleotide binding	2.18E-02
76	GO:0051082: unfolded protein binding	2.36E-02
77	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.88E-02
78	GO:0030246: carbohydrate binding	2.94E-02
79	GO:0008565: protein transporter activity	3.15E-02
80	GO:0015297: antiporter activity	3.37E-02
81	GO:0003824: catalytic activity	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0009514: glyoxysome	3.77E-05
2	GO:0016442: RISC complex	6.58E-05
3	GO:0046861: glyoxysomal membrane	2.69E-04
4	GO:0030139: endocytic vesicle	2.69E-04
5	GO:0009530: primary cell wall	2.69E-04
6	GO:0005783: endoplasmic reticulum	2.80E-04
7	GO:0005775: vacuolar lumen	3.90E-04
8	GO:0032585: multivesicular body membrane	3.90E-04
9	GO:0005776: autophagosome	5.20E-04
10	GO:0005773: vacuole	5.64E-04
11	GO:0031597: cytosolic proteasome complex	9.59E-04
12	GO:0031595: nuclear proteasome complex	1.12E-03
13	GO:0005618: cell wall	1.16E-03
14	GO:0005829: cytosol	1.29E-03
15	GO:0000421: autophagosome membrane	1.29E-03
16	GO:0005779: integral component of peroxisomal membrane	1.47E-03
17	GO:0010494: cytoplasmic stress granule	1.65E-03
18	GO:0031901: early endosome membrane	1.65E-03
19	GO:0000502: proteasome complex	1.79E-03
20	GO:0008540: proteasome regulatory particle, base subcomplex	1.85E-03
21	GO:0005635: nuclear envelope	1.91E-03
22	GO:0005765: lysosomal membrane	2.26E-03
23	GO:0048471: perinuclear region of cytoplasm	2.26E-03
24	GO:0005769: early endosome	3.40E-03
25	GO:0005774: vacuolar membrane	3.47E-03
26	GO:0048046: apoplast	3.78E-03
27	GO:0031410: cytoplasmic vesicle	4.43E-03
28	GO:0005778: peroxisomal membrane	8.06E-03
29	GO:0005768: endosome	8.45E-03
30	GO:0000932: P-body	8.74E-03
31	GO:0005788: endoplasmic reticulum lumen	9.08E-03
32	GO:0009507: chloroplast	9.98E-03
33	GO:0005643: nuclear pore	1.05E-02
34	GO:0000325: plant-type vacuole	1.17E-02
35	GO:0005576: extracellular region	2.09E-02
36	GO:0005834: heterotrimeric G-protein complex	2.17E-02
37	GO:0005794: Golgi apparatus	2.20E-02
38	GO:0005777: peroxisome	2.51E-02
39	GO:0010287: plastoglobule	2.67E-02
40	GO:0005802: trans-Golgi network	3.50E-02