GO Enrichment Analysis of Co-expressed Genes with
AT4G36360
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 3 | GO:0090391: granum assembly | 3.55E-10 |
| 4 | GO:0010196: nonphotochemical quenching | 1.52E-05 |
| 5 | GO:0071277: cellular response to calcium ion | 5.18E-05 |
| 6 | GO:0046467: membrane lipid biosynthetic process | 5.18E-05 |
| 7 | GO:0015671: oxygen transport | 5.18E-05 |
| 8 | GO:0009773: photosynthetic electron transport in photosystem I | 5.75E-05 |
| 9 | GO:0006094: gluconeogenesis | 7.84E-05 |
| 10 | GO:0010143: cutin biosynthetic process | 9.00E-05 |
| 11 | GO:0015979: photosynthesis | 1.07E-04 |
| 12 | GO:0006096: glycolytic process | 1.30E-04 |
| 13 | GO:0006081: cellular aldehyde metabolic process | 2.17E-04 |
| 14 | GO:0045727: positive regulation of translation | 4.24E-04 |
| 15 | GO:0015994: chlorophyll metabolic process | 4.24E-04 |
| 16 | GO:0010027: thylakoid membrane organization | 4.83E-04 |
| 17 | GO:0015995: chlorophyll biosynthetic process | 5.66E-04 |
| 18 | GO:0010190: cytochrome b6f complex assembly | 6.60E-04 |
| 19 | GO:0009972: cytidine deamination | 6.60E-04 |
| 20 | GO:0010189: vitamin E biosynthetic process | 7.87E-04 |
| 21 | GO:0080167: response to karrikin | 8.01E-04 |
| 22 | GO:0034599: cellular response to oxidative stress | 8.17E-04 |
| 23 | GO:1900057: positive regulation of leaf senescence | 9.18E-04 |
| 24 | GO:0006631: fatty acid metabolic process | 9.22E-04 |
| 25 | GO:0009704: de-etiolation | 1.06E-03 |
| 26 | GO:0019827: stem cell population maintenance | 1.06E-03 |
| 27 | GO:0008610: lipid biosynthetic process | 1.06E-03 |
| 28 | GO:0009642: response to light intensity | 1.06E-03 |
| 29 | GO:0032544: plastid translation | 1.20E-03 |
| 30 | GO:0010206: photosystem II repair | 1.35E-03 |
| 31 | GO:0090333: regulation of stomatal closure | 1.35E-03 |
| 32 | GO:0006783: heme biosynthetic process | 1.35E-03 |
| 33 | GO:0006098: pentose-phosphate shunt | 1.35E-03 |
| 34 | GO:0019432: triglyceride biosynthetic process | 1.35E-03 |
| 35 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.50E-03 |
| 36 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.67E-03 |
| 37 | GO:0042545: cell wall modification | 1.81E-03 |
| 38 | GO:0043085: positive regulation of catalytic activity | 1.84E-03 |
| 39 | GO:0000272: polysaccharide catabolic process | 1.84E-03 |
| 40 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.84E-03 |
| 41 | GO:0006006: glucose metabolic process | 2.19E-03 |
| 42 | GO:0019253: reductive pentose-phosphate cycle | 2.38E-03 |
| 43 | GO:0010207: photosystem II assembly | 2.38E-03 |
| 44 | GO:0009266: response to temperature stimulus | 2.38E-03 |
| 45 | GO:0010025: wax biosynthetic process | 2.76E-03 |
| 46 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.76E-03 |
| 47 | GO:0006633: fatty acid biosynthetic process | 2.90E-03 |
| 48 | GO:0007017: microtubule-based process | 3.16E-03 |
| 49 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.16E-03 |
| 50 | GO:0045490: pectin catabolic process | 3.19E-03 |
| 51 | GO:0016998: cell wall macromolecule catabolic process | 3.37E-03 |
| 52 | GO:0016117: carotenoid biosynthetic process | 4.26E-03 |
| 53 | GO:0010118: stomatal movement | 4.49E-03 |
| 54 | GO:0042631: cellular response to water deprivation | 4.49E-03 |
| 55 | GO:0006662: glycerol ether metabolic process | 4.72E-03 |
| 56 | GO:0009658: chloroplast organization | 4.91E-03 |
| 57 | GO:0010193: response to ozone | 5.46E-03 |
| 58 | GO:0010411: xyloglucan metabolic process | 7.88E-03 |
| 59 | GO:0006869: lipid transport | 7.98E-03 |
| 60 | GO:0016311: dephosphorylation | 8.17E-03 |
| 61 | GO:0018298: protein-chromophore linkage | 8.46E-03 |
| 62 | GO:0010311: lateral root formation | 8.76E-03 |
| 63 | GO:0000160: phosphorelay signal transduction system | 8.76E-03 |
| 64 | GO:0010218: response to far red light | 9.06E-03 |
| 65 | GO:0009637: response to blue light | 9.99E-03 |
| 66 | GO:0010114: response to red light | 1.19E-02 |
| 67 | GO:0042546: cell wall biogenesis | 1.23E-02 |
| 68 | GO:0055114: oxidation-reduction process | 1.25E-02 |
| 69 | GO:0009735: response to cytokinin | 1.46E-02 |
| 70 | GO:0009736: cytokinin-activated signaling pathway | 1.47E-02 |
| 71 | GO:0006364: rRNA processing | 1.47E-02 |
| 72 | GO:0010224: response to UV-B | 1.51E-02 |
| 73 | GO:0009416: response to light stimulus | 1.60E-02 |
| 74 | GO:0009611: response to wounding | 1.63E-02 |
| 75 | GO:0045893: positive regulation of transcription, DNA-templated | 1.83E-02 |
| 76 | GO:0007623: circadian rhythm | 2.79E-02 |
| 77 | GO:0010468: regulation of gene expression | 3.17E-02 |
| 78 | GO:0009409: response to cold | 4.37E-02 |
| 79 | GO:0010200: response to chitin | 4.55E-02 |
| 80 | GO:0006810: transport | 4.73E-02 |
| 81 | GO:0005975: carbohydrate metabolic process | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 2 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 3 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 4 | GO:0004332: fructose-bisphosphate aldolase activity | 7.64E-06 |
| 5 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.00E-05 |
| 6 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 5.18E-05 |
| 7 | GO:0005344: oxygen transporter activity | 5.18E-05 |
| 8 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 5.18E-05 |
| 9 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 5.18E-05 |
| 10 | GO:0004565: beta-galactosidase activity | 7.84E-05 |
| 11 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 1.27E-04 |
| 12 | GO:0008883: glutamyl-tRNA reductase activity | 1.27E-04 |
| 13 | GO:0047746: chlorophyllase activity | 1.27E-04 |
| 14 | GO:0042389: omega-3 fatty acid desaturase activity | 1.27E-04 |
| 15 | GO:0010297: heteropolysaccharide binding | 1.27E-04 |
| 16 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 2.17E-04 |
| 17 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 2.17E-04 |
| 18 | GO:0050734: hydroxycinnamoyltransferase activity | 2.17E-04 |
| 19 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 3.17E-04 |
| 20 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 6.60E-04 |
| 21 | GO:0004126: cytidine deaminase activity | 7.87E-04 |
| 22 | GO:0102391: decanoate--CoA ligase activity | 7.87E-04 |
| 23 | GO:0050661: NADP binding | 8.87E-04 |
| 24 | GO:0004620: phospholipase activity | 9.18E-04 |
| 25 | GO:0004467: long-chain fatty acid-CoA ligase activity | 9.18E-04 |
| 26 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.20E-03 |
| 27 | GO:0045330: aspartyl esterase activity | 1.46E-03 |
| 28 | GO:0008047: enzyme activator activity | 1.67E-03 |
| 29 | GO:0030599: pectinesterase activity | 1.76E-03 |
| 30 | GO:0031409: pigment binding | 2.76E-03 |
| 31 | GO:0042802: identical protein binding | 4.04E-03 |
| 32 | GO:0047134: protein-disulfide reductase activity | 4.26E-03 |
| 33 | GO:0050662: coenzyme binding | 4.96E-03 |
| 34 | GO:0004791: thioredoxin-disulfide reductase activity | 4.96E-03 |
| 35 | GO:0016853: isomerase activity | 4.96E-03 |
| 36 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 5.46E-03 |
| 37 | GO:0000156: phosphorelay response regulator activity | 5.97E-03 |
| 38 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.97E-03 |
| 39 | GO:0005200: structural constituent of cytoskeleton | 6.49E-03 |
| 40 | GO:0016168: chlorophyll binding | 7.31E-03 |
| 41 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 7.88E-03 |
| 42 | GO:0003993: acid phosphatase activity | 1.03E-02 |
| 43 | GO:0008289: lipid binding | 1.25E-02 |
| 44 | GO:0051287: NAD binding | 1.37E-02 |
| 45 | GO:0015035: protein disulfide oxidoreductase activity | 1.93E-02 |
| 46 | GO:0019843: rRNA binding | 2.22E-02 |
| 47 | GO:0019825: oxygen binding | 2.28E-02 |
| 48 | GO:0003743: translation initiation factor activity | 3.12E-02 |
| 49 | GO:0008168: methyltransferase activity | 3.71E-02 |
| 50 | GO:0016788: hydrolase activity, acting on ester bonds | 3.86E-02 |
| 51 | GO:0052689: carboxylic ester hydrolase activity | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 6.41E-13 |
| 3 | GO:0009507: chloroplast | 1.12E-12 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 7.69E-10 |
| 5 | GO:0009579: thylakoid | 3.31E-07 |
| 6 | GO:0009941: chloroplast envelope | 4.22E-06 |
| 7 | GO:0048046: apoplast | 1.02E-04 |
| 8 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.27E-04 |
| 9 | GO:0005618: cell wall | 1.28E-04 |
| 10 | GO:0010287: plastoglobule | 2.13E-04 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 2.30E-04 |
| 12 | GO:0031969: chloroplast membrane | 8.01E-04 |
| 13 | GO:0031977: thylakoid lumen | 9.22E-04 |
| 14 | GO:0045298: tubulin complex | 1.35E-03 |
| 15 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.35E-03 |
| 16 | GO:0008180: COP9 signalosome | 1.35E-03 |
| 17 | GO:0009570: chloroplast stroma | 1.66E-03 |
| 18 | GO:0030095: chloroplast photosystem II | 2.38E-03 |
| 19 | GO:0030076: light-harvesting complex | 2.56E-03 |
| 20 | GO:0043234: protein complex | 2.76E-03 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 3.16E-03 |
| 22 | GO:0009522: photosystem I | 4.96E-03 |
| 23 | GO:0019898: extrinsic component of membrane | 5.21E-03 |
| 24 | GO:0010319: stromule | 6.49E-03 |
| 25 | GO:0019005: SCF ubiquitin ligase complex | 8.46E-03 |
| 26 | GO:0009505: plant-type cell wall | 8.64E-03 |
| 27 | GO:0000502: proteasome complex | 1.47E-02 |
| 28 | GO:0005773: vacuole | 1.54E-02 |
| 29 | GO:0005623: cell | 2.26E-02 |
| 30 | GO:0005874: microtubule | 4.33E-02 |