co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G36210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006858: extracellular transport	0.00E+00
2	GO:0036258: multivesicular body assembly	0.00E+00
3	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
4	GO:0006592: ornithine biosynthetic process	0.00E+00
5	GO:0006511: ubiquitin-dependent protein catabolic process	4.29E-09
6	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.28E-07
7	GO:0030433: ubiquitin-dependent ERAD pathway	1.72E-05
8	GO:0051603: proteolysis involved in cellular protein catabolic process	2.76E-05
9	GO:0019628: urate catabolic process	1.04E-04
10	GO:1901430: positive regulation of syringal lignin biosynthetic process	1.04E-04
11	GO:0035494: SNARE complex disassembly	1.04E-04
12	GO:0006144: purine nucleobase metabolic process	1.04E-04
13	GO:0006695: cholesterol biosynthetic process	2.44E-04
14	GO:0010372: positive regulation of gibberellin biosynthetic process	2.44E-04
15	GO:0007031: peroxisome organization	2.74E-04
16	GO:0010498: proteasomal protein catabolic process	4.05E-04
17	GO:0010359: regulation of anion channel activity	4.05E-04
18	GO:0090630: activation of GTPase activity	4.05E-04
19	GO:0006517: protein deglycosylation	4.05E-04
20	GO:0015031: protein transport	4.21E-04
21	GO:0002679: respiratory burst involved in defense response	5.82E-04
22	GO:0010255: glucose mediated signaling pathway	5.82E-04
23	GO:0070676: intralumenal vesicle formation	5.82E-04
24	GO:0001676: long-chain fatty acid metabolic process	5.82E-04
25	GO:0010363: regulation of plant-type hypersensitive response	7.73E-04
26	GO:0010222: stem vascular tissue pattern formation	7.73E-04
27	GO:0030163: protein catabolic process	9.28E-04
28	GO:0009823: cytokinin catabolic process	9.77E-04
29	GO:0018279: protein N-linked glycosylation via asparagine	9.77E-04
30	GO:0006564: L-serine biosynthetic process	9.77E-04
31	GO:0005513: detection of calcium ion	9.77E-04
32	GO:0009612: response to mechanical stimulus	1.43E-03
33	GO:0006499: N-terminal protein myristoylation	1.66E-03
34	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.93E-03
35	GO:0006491: N-glycan processing	1.93E-03
36	GO:0006402: mRNA catabolic process	1.93E-03
37	GO:0050821: protein stabilization	1.93E-03
38	GO:0006526: arginine biosynthetic process	2.21E-03
39	GO:0046685: response to arsenic-containing substance	2.49E-03
40	GO:0009821: alkaloid biosynthetic process	2.49E-03
41	GO:0009651: response to salt stress	2.88E-03
42	GO:0009688: abscisic acid biosynthetic process	3.10E-03
43	GO:0043069: negative regulation of programmed cell death	3.10E-03
44	GO:0043085: positive regulation of catalytic activity	3.42E-03
45	GO:0006790: sulfur compound metabolic process	3.75E-03
46	GO:0016925: protein sumoylation	3.75E-03
47	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	3.75E-03
48	GO:0006096: glycolytic process	3.86E-03
49	GO:0006829: zinc II ion transport	4.09E-03
50	GO:0006807: nitrogen compound metabolic process	4.09E-03
51	GO:0034605: cellular response to heat	4.44E-03
52	GO:0046854: phosphatidylinositol phosphorylation	4.80E-03
53	GO:0009058: biosynthetic process	6.11E-03
54	GO:0010431: seed maturation	6.35E-03
55	GO:0010227: floral organ abscission	7.18E-03
56	GO:0009561: megagametogenesis	7.61E-03
57	GO:0009306: protein secretion	7.61E-03
58	GO:0010089: xylem development	7.61E-03
59	GO:0042147: retrograde transport, endosome to Golgi	8.05E-03
60	GO:0051028: mRNA transport	8.05E-03
61	GO:0010154: fruit development	8.95E-03
62	GO:0006662: glycerol ether metabolic process	8.95E-03
63	GO:0007166: cell surface receptor signaling pathway	9.15E-03
64	GO:0061025: membrane fusion	9.42E-03
65	GO:0055072: iron ion homeostasis	9.90E-03
66	GO:0009851: auxin biosynthetic process	9.90E-03
67	GO:0046686: response to cadmium ion	9.98E-03
68	GO:0010193: response to ozone	1.04E-02
69	GO:0016132: brassinosteroid biosynthetic process	1.04E-02
70	GO:0031047: gene silencing by RNA	1.09E-02
71	GO:0009826: unidimensional cell growth	1.19E-02
72	GO:0006914: autophagy	1.19E-02
73	GO:0016579: protein deubiquitination	1.29E-02
74	GO:0016126: sterol biosynthetic process	1.35E-02
75	GO:0009615: response to virus	1.35E-02
76	GO:0009816: defense response to bacterium, incompatible interaction	1.40E-02
77	GO:0006888: ER to Golgi vesicle-mediated transport	1.51E-02
78	GO:0006950: response to stress	1.51E-02
79	GO:0009817: defense response to fungus, incompatible interaction	1.62E-02
80	GO:0010311: lateral root formation	1.68E-02
81	GO:0010119: regulation of stomatal movement	1.80E-02
82	GO:0010043: response to zinc ion	1.80E-02
83	GO:0006886: intracellular protein transport	1.90E-02
84	GO:0034599: cellular response to oxidative stress	1.98E-02
85	GO:0006099: tricarboxylic acid cycle	1.98E-02
86	GO:0030001: metal ion transport	2.11E-02
87	GO:0006631: fatty acid metabolic process	2.17E-02
88	GO:0006897: endocytosis	2.17E-02
89	GO:0031347: regulation of defense response	2.64E-02
90	GO:0009664: plant-type cell wall organization	2.70E-02
91	GO:0009809: lignin biosynthetic process	2.84E-02
92	GO:0009626: plant-type hypersensitive response	3.35E-02
93	GO:0009620: response to fungus	3.43E-02
94	GO:0009553: embryo sac development	3.58E-02
95	GO:0018105: peptidyl-serine phosphorylation	3.73E-02
96	GO:0055114: oxidation-reduction process	4.01E-02
97	GO:0009555: pollen development	4.03E-02
98	GO:0042744: hydrogen peroxide catabolic process	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0009918: sterol delta7 reductase activity	0.00E+00
2	GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group	0.00E+00
3	GO:0004846: urate oxidase activity	0.00E+00
4	GO:0008777: acetylornithine deacetylase activity	0.00E+00
5	GO:0047598: 7-dehydrocholesterol reductase activity	0.00E+00
6	GO:0004298: threonine-type endopeptidase activity	1.95E-11
7	GO:0036402: proteasome-activating ATPase activity	1.28E-07
8	GO:0008233: peptidase activity	3.15E-06
9	GO:0017025: TBP-class protein binding	7.30E-06
10	GO:0019786: Atg8-specific protease activity	1.04E-04
11	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	1.04E-04
12	GO:0048037: cofactor binding	1.04E-04
13	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.06E-04
14	GO:0004743: pyruvate kinase activity	1.15E-04
15	GO:0030955: potassium ion binding	1.15E-04
16	GO:0004775: succinate-CoA ligase (ADP-forming) activity	2.44E-04
17	GO:0019779: Atg8 activating enzyme activity	2.44E-04
18	GO:0004776: succinate-CoA ligase (GDP-forming) activity	2.44E-04
19	GO:0052739: phosphatidylserine 1-acylhydrolase activity	2.44E-04
20	GO:0051879: Hsp90 protein binding	2.44E-04
21	GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity	2.44E-04
22	GO:0004617: phosphoglycerate dehydrogenase activity	2.44E-04
23	GO:0004848: ureidoglycolate hydrolase activity	4.05E-04
24	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	4.05E-04
25	GO:0005483: soluble NSF attachment protein activity	4.05E-04
26	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	5.82E-04
27	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	7.73E-04
28	GO:0004031: aldehyde oxidase activity	7.73E-04
29	GO:0050302: indole-3-acetaldehyde oxidase activity	7.73E-04
30	GO:0019776: Atg8 ligase activity	7.73E-04
31	GO:0019905: syntaxin binding	7.73E-04
32	GO:0004518: nuclease activity	8.74E-04
33	GO:0008374: O-acyltransferase activity	9.77E-04
34	GO:0019139: cytokinin dehydrogenase activity	9.77E-04
35	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	9.77E-04
36	GO:0031386: protein tag	9.77E-04
37	GO:0008237: metallopeptidase activity	1.04E-03
38	GO:0031593: polyubiquitin binding	1.19E-03
39	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.19E-03
40	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.19E-03
41	GO:0016887: ATPase activity	1.42E-03
42	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.43E-03
43	GO:0102391: decanoate--CoA ligase activity	1.43E-03
44	GO:0004656: procollagen-proline 4-dioxygenase activity	1.43E-03
45	GO:0004467: long-chain fatty acid-CoA ligase activity	1.67E-03
46	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.73E-03
47	GO:0000166: nucleotide binding	1.75E-03
48	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	2.21E-03
49	GO:0016844: strictosidine synthase activity	2.79E-03
50	GO:0008047: enzyme activator activity	3.10E-03
51	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	3.10E-03
52	GO:0008131: primary amine oxidase activity	4.44E-03
53	GO:0043130: ubiquitin binding	5.56E-03
54	GO:0031418: L-ascorbic acid binding	5.56E-03
55	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	6.35E-03
56	GO:0008565: protein transporter activity	6.93E-03
57	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.46E-03
58	GO:0047134: protein-disulfide reductase activity	8.05E-03
59	GO:0046873: metal ion transmembrane transporter activity	8.95E-03
60	GO:0004791: thioredoxin-disulfide reductase activity	9.42E-03
61	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.04E-02
62	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.14E-02
63	GO:0000287: magnesium ion binding	1.22E-02
64	GO:0046872: metal ion binding	1.24E-02
65	GO:0005524: ATP binding	1.29E-02
66	GO:0016597: amino acid binding	1.29E-02
67	GO:0050660: flavin adenine dinucleotide binding	1.44E-02
68	GO:0005516: calmodulin binding	1.45E-02
69	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.45E-02
70	GO:0004683: calmodulin-dependent protein kinase activity	1.51E-02
71	GO:0005096: GTPase activator activity	1.68E-02
72	GO:0005509: calcium ion binding	1.91E-02
73	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.92E-02
74	GO:0003993: acid phosphatase activity	1.98E-02
75	GO:0004722: protein serine/threonine phosphatase activity	2.02E-02
76	GO:0035091: phosphatidylinositol binding	2.43E-02
77	GO:0051537: 2 iron, 2 sulfur cluster binding	2.43E-02
78	GO:0005198: structural molecule activity	2.50E-02
79	GO:0051287: NAD binding	2.64E-02
80	GO:0003729: mRNA binding	3.47E-02
81	GO:0015035: protein disulfide oxidoreductase activity	3.73E-02
82	GO:0008026: ATP-dependent helicase activity	3.81E-02
83	GO:0030170: pyridoxal phosphate binding	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0000502: proteasome complex	3.13E-17
2	GO:0005839: proteasome core complex	1.95E-11
3	GO:0005829: cytosol	1.25E-07
4	GO:0031597: cytosolic proteasome complex	2.27E-07
5	GO:0031595: nuclear proteasome complex	3.74E-07
6	GO:0008540: proteasome regulatory particle, base subcomplex	1.67E-06
7	GO:0019773: proteasome core complex, alpha-subunit complex	7.69E-05
8	GO:0016442: RISC complex	1.04E-04
9	GO:0046861: glyoxysomal membrane	4.05E-04
10	GO:0005775: vacuolar lumen	5.82E-04
11	GO:0005773: vacuole	6.92E-04
12	GO:0005776: autophagosome	7.73E-04
13	GO:0000813: ESCRT I complex	9.77E-04
14	GO:0008250: oligosaccharyltransferase complex	9.77E-04
15	GO:0030904: retromer complex	1.19E-03
16	GO:0005783: endoplasmic reticulum	1.33E-03
17	GO:0000421: autophagosome membrane	1.93E-03
18	GO:0009514: glyoxysome	2.21E-03
19	GO:0031902: late endosome membrane	2.25E-03
20	GO:0031090: organelle membrane	2.49E-03
21	GO:0010494: cytoplasmic stress granule	2.49E-03
22	GO:0005774: vacuolar membrane	3.07E-03
23	GO:0008541: proteasome regulatory particle, lid subcomplex	3.42E-03
24	GO:0048471: perinuclear region of cytoplasm	3.42E-03
25	GO:0005635: nuclear envelope	3.50E-03
26	GO:0030176: integral component of endoplasmic reticulum membrane	4.80E-03
27	GO:0031410: cytoplasmic vesicle	6.76E-03
28	GO:0005886: plasma membrane	9.06E-03
29	GO:0005777: peroxisome	1.03E-02
30	GO:0005794: Golgi apparatus	1.22E-02
31	GO:0005778: peroxisomal membrane	1.24E-02
32	GO:0005618: cell wall	1.30E-02
33	GO:0000932: P-body	1.35E-02
34	GO:0005802: trans-Golgi network	1.57E-02
35	GO:0005643: nuclear pore	1.62E-02
36	GO:0005768: endosome	1.85E-02
37	GO:0031201: SNARE complex	2.17E-02
38	GO:0031966: mitochondrial membrane	2.70E-02
39	GO:0005834: heterotrimeric G-protein complex	3.35E-02
40	GO:0005789: endoplasmic reticulum membrane	3.58E-02
41	GO:0022626: cytosolic ribosome	3.86E-02
42	GO:0009506: plasmodesma	4.00E-02
43	GO:0005737: cytoplasm	4.29E-02
44	GO:0005623: cell	4.37E-02