co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G36190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0098586: cellular response to virus	0.00E+00
2	GO:0010203: response to very low fluence red light stimulus	0.00E+00
3	GO:0007037: vacuolar phosphate transport	0.00E+00
4	GO:0017009: protein-phycocyanobilin linkage	0.00E+00
5	GO:0033528: S-methylmethionine cycle	0.00E+00
6	GO:0015969: guanosine tetraphosphate metabolic process	8.25E-05
7	GO:0000012: single strand break repair	8.25E-05
8	GO:0015798: myo-inositol transport	8.25E-05
9	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	8.25E-05
10	GO:0043087: regulation of GTPase activity	8.25E-05
11	GO:1902458: positive regulation of stomatal opening	8.25E-05
12	GO:0048508: embryonic meristem development	8.25E-05
13	GO:0046741: transport of virus in host, tissue to tissue	1.97E-04
14	GO:0009945: radial axis specification	1.97E-04
15	GO:0006435: threonyl-tRNA aminoacylation	1.97E-04
16	GO:0043255: regulation of carbohydrate biosynthetic process	1.97E-04
17	GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole	1.97E-04
18	GO:0000256: allantoin catabolic process	1.97E-04
19	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.97E-04
20	GO:0090351: seedling development	1.98E-04
21	GO:0031022: nuclear migration along microfilament	3.29E-04
22	GO:0010136: ureide catabolic process	3.29E-04
23	GO:0017006: protein-tetrapyrrole linkage	3.29E-04
24	GO:0000913: preprophase band assembly	3.29E-04
25	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.26E-04
26	GO:0009584: detection of visible light	4.75E-04
27	GO:0006145: purine nucleobase catabolic process	4.75E-04
28	GO:0043572: plastid fission	4.75E-04
29	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	4.75E-04
30	GO:0007018: microtubule-based movement	5.32E-04
31	GO:0007059: chromosome segregation	5.32E-04
32	GO:0071483: cellular response to blue light	6.32E-04
33	GO:0048442: sepal development	6.32E-04
34	GO:0051322: anaphase	6.32E-04
35	GO:0016032: viral process	6.48E-04
36	GO:0009904: chloroplast accumulation movement	8.00E-04
37	GO:0045038: protein import into chloroplast thylakoid membrane	8.00E-04
38	GO:0000910: cytokinesis	8.22E-04
39	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	9.77E-04
40	GO:0006559: L-phenylalanine catabolic process	9.77E-04
41	GO:0010190: cytochrome b6f complex assembly	9.77E-04
42	GO:0009612: response to mechanical stimulus	1.16E-03
43	GO:0010076: maintenance of floral meristem identity	1.16E-03
44	GO:0017148: negative regulation of translation	1.16E-03
45	GO:0009942: longitudinal axis specification	1.16E-03
46	GO:0009903: chloroplast avoidance movement	1.16E-03
47	GO:0009854: oxidative photosynthetic carbon pathway	1.16E-03
48	GO:0009645: response to low light intensity stimulus	1.36E-03
49	GO:0010161: red light signaling pathway	1.36E-03
50	GO:0009853: photorespiration	1.40E-03
51	GO:2000070: regulation of response to water deprivation	1.57E-03
52	GO:0009231: riboflavin biosynthetic process	1.57E-03
53	GO:0009808: lignin metabolic process	1.79E-03
54	GO:0071482: cellular response to light stimulus	1.79E-03
55	GO:0009821: alkaloid biosynthetic process	2.02E-03
56	GO:0034765: regulation of ion transmembrane transport	2.02E-03
57	GO:0000373: Group II intron splicing	2.02E-03
58	GO:0046685: response to arsenic-containing substance	2.02E-03
59	GO:0009098: leucine biosynthetic process	2.26E-03
60	GO:0009086: methionine biosynthetic process	2.26E-03
61	GO:0009638: phototropism	2.26E-03
62	GO:0009585: red, far-red light phototransduction	2.40E-03
63	GO:0048441: petal development	2.51E-03
64	GO:0006259: DNA metabolic process	2.51E-03
65	GO:0006265: DNA topological change	2.77E-03
66	GO:0006352: DNA-templated transcription, initiation	2.77E-03
67	GO:0045037: protein import into chloroplast stroma	3.03E-03
68	GO:0010152: pollen maturation	3.03E-03
69	GO:0009767: photosynthetic electron transport chain	3.31E-03
70	GO:0048440: carpel development	3.59E-03
71	GO:0010020: chloroplast fission	3.59E-03
72	GO:0010207: photosystem II assembly	3.59E-03
73	GO:0006302: double-strand break repair	3.59E-03
74	GO:0009833: plant-type primary cell wall biogenesis	4.18E-03
75	GO:0006833: water transport	4.18E-03
76	GO:0010073: meristem maintenance	4.80E-03
77	GO:0006825: copper ion transport	4.80E-03
78	GO:0051302: regulation of cell division	4.80E-03
79	GO:0051260: protein homooligomerization	5.12E-03
80	GO:0006413: translational initiation	5.45E-03
81	GO:0006730: one-carbon metabolic process	5.45E-03
82	GO:0031348: negative regulation of defense response	5.45E-03
83	GO:0048443: stamen development	6.13E-03
84	GO:0009306: protein secretion	6.13E-03
85	GO:0042391: regulation of membrane potential	6.83E-03
86	GO:0034220: ion transmembrane transport	6.83E-03
87	GO:0048653: anther development	6.83E-03
88	GO:0006520: cellular amino acid metabolic process	7.20E-03
89	GO:0010197: polar nucleus fusion	7.20E-03
90	GO:0046323: glucose import	7.20E-03
91	GO:0010268: brassinosteroid homeostasis	7.20E-03
92	GO:0055085: transmembrane transport	7.85E-03
93	GO:0006468: protein phosphorylation	7.91E-03
94	GO:0000302: response to reactive oxygen species	8.33E-03
95	GO:0016132: brassinosteroid biosynthetic process	8.33E-03
96	GO:0019761: glucosinolate biosynthetic process	8.73E-03
97	GO:0009630: gravitropism	8.73E-03
98	GO:0009658: chloroplast organization	9.05E-03
99	GO:0019760: glucosinolate metabolic process	9.53E-03
100	GO:0016125: sterol metabolic process	9.53E-03
101	GO:0009737: response to abscisic acid	9.92E-03
102	GO:0071805: potassium ion transmembrane transport	9.94E-03
103	GO:0016126: sterol biosynthetic process	1.08E-02
104	GO:0010029: regulation of seed germination	1.12E-02
105	GO:0009793: embryo development ending in seed dormancy	1.12E-02
106	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.16E-02
107	GO:0010411: xyloglucan metabolic process	1.21E-02
108	GO:0048573: photoperiodism, flowering	1.21E-02
109	GO:0030244: cellulose biosynthetic process	1.30E-02
110	GO:0018298: protein-chromophore linkage	1.30E-02
111	GO:0009414: response to water deprivation	1.38E-02
112	GO:0009834: plant-type secondary cell wall biogenesis	1.39E-02
113	GO:0010218: response to far red light	1.39E-02
114	GO:0071555: cell wall organization	1.42E-02
115	GO:0045087: innate immune response	1.54E-02
116	GO:0008152: metabolic process	1.83E-02
117	GO:0009640: photomorphogenesis	1.84E-02
118	GO:0042546: cell wall biogenesis	1.89E-02
119	GO:0000165: MAPK cascade	2.11E-02
120	GO:0009846: pollen germination	2.16E-02
121	GO:0009809: lignin biosynthetic process	2.28E-02
122	GO:0009738: abscisic acid-activated signaling pathway	2.86E-02
123	GO:0009611: response to wounding	3.02E-02
124	GO:0035556: intracellular signal transduction	3.12E-02
125	GO:0009058: biosynthetic process	3.56E-02
126	GO:0009790: embryo development	3.83E-02
127	GO:0009739: response to gibberellin	4.67E-02
128	GO:0007166: cell surface receptor signaling pathway	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
2	GO:1990055: phenylacetaldehyde synthase activity	0.00E+00
3	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
4	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
5	GO:0004008: copper-exporting ATPase activity	8.25E-05
6	GO:0016618: hydroxypyruvate reductase activity	8.25E-05
7	GO:0031516: far-red light photoreceptor activity	8.25E-05
8	GO:0004837: tyrosine decarboxylase activity	8.25E-05
9	GO:0004451: isocitrate lyase activity	8.25E-05
10	GO:0004829: threonine-tRNA ligase activity	1.97E-04
11	GO:0008728: GTP diphosphokinase activity	1.97E-04
12	GO:0005366: myo-inositol:proton symporter activity	1.97E-04
13	GO:0009883: red or far-red light photoreceptor activity	1.97E-04
14	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.97E-04
15	GO:0009977: proton motive force dependent protein transmembrane transporter activity	1.97E-04
16	GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity	1.97E-04
17	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	1.97E-04
18	GO:0003861: 3-isopropylmalate dehydratase activity	3.29E-04
19	GO:0003935: GTP cyclohydrolase II activity	3.29E-04
20	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	3.29E-04
21	GO:0008020: G-protein coupled photoreceptor activity	3.29E-04
22	GO:0030267: glyoxylate reductase (NADP) activity	3.29E-04
23	GO:0008430: selenium binding	3.29E-04
24	GO:0005354: galactose transmembrane transporter activity	4.75E-04
25	GO:0048038: quinone binding	6.09E-04
26	GO:0016987: sigma factor activity	6.32E-04
27	GO:0004506: squalene monooxygenase activity	6.32E-04
28	GO:0001053: plastid sigma factor activity	6.32E-04
29	GO:0016836: hydro-lyase activity	6.32E-04
30	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	6.32E-04
31	GO:0015144: carbohydrate transmembrane transporter activity	6.41E-04
32	GO:0005351: sugar:proton symporter activity	7.44E-04
33	GO:0008017: microtubule binding	8.10E-04
34	GO:0042802: identical protein binding	1.03E-03
35	GO:0009927: histidine phosphotransfer kinase activity	1.16E-03
36	GO:0005242: inward rectifier potassium channel activity	1.16E-03
37	GO:0004672: protein kinase activity	1.32E-03
38	GO:0043022: ribosome binding	1.57E-03
39	GO:0005375: copper ion transmembrane transporter activity	1.79E-03
40	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	1.79E-03
41	GO:0016844: strictosidine synthase activity	2.26E-03
42	GO:0005525: GTP binding	2.30E-03
43	GO:0004673: protein histidine kinase activity	2.51E-03
44	GO:0003777: microtubule motor activity	2.66E-03
45	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.31E-03
46	GO:0008081: phosphoric diester hydrolase activity	3.31E-03
47	GO:0000155: phosphorelay sensor kinase activity	3.31E-03
48	GO:0004190: aspartic-type endopeptidase activity	3.88E-03
49	GO:0016887: ATPase activity	4.88E-03
50	GO:0004176: ATP-dependent peptidase activity	5.12E-03
51	GO:0005515: protein binding	5.32E-03
52	GO:0016760: cellulose synthase (UDP-forming) activity	5.78E-03
53	GO:0030551: cyclic nucleotide binding	6.83E-03
54	GO:0003743: translation initiation factor activity	6.83E-03
55	GO:0005249: voltage-gated potassium channel activity	6.83E-03
56	GO:0004527: exonuclease activity	7.20E-03
57	GO:0005355: glucose transmembrane transporter activity	7.57E-03
58	GO:0016762: xyloglucan:xyloglucosyl transferase activity	8.33E-03
59	GO:0016759: cellulose synthase activity	9.53E-03
60	GO:0008237: metallopeptidase activity	9.94E-03
61	GO:0005524: ATP binding	1.01E-02
62	GO:0015250: water channel activity	1.08E-02
63	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.21E-02
64	GO:0005096: GTPase activator activity	1.35E-02
65	GO:0004222: metalloendopeptidase activity	1.39E-02
66	GO:0004871: signal transducer activity	1.41E-02
67	GO:0042803: protein homodimerization activity	1.41E-02
68	GO:0003697: single-stranded DNA binding	1.54E-02
69	GO:0035091: phosphatidylinositol binding	1.95E-02
70	GO:0016491: oxidoreductase activity	2.01E-02
71	GO:0051287: NAD binding	2.11E-02
72	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.28E-02
73	GO:0003690: double-stranded DNA binding	2.33E-02
74	GO:0004674: protein serine/threonine kinase activity	3.45E-02
75	GO:0016301: kinase activity	3.45E-02
76	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.50E-02
77	GO:0016829: lyase activity	3.63E-02
78	GO:0030170: pyridoxal phosphate binding	3.70E-02
79	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.76E-02
80	GO:0008565: protein transporter activity	3.90E-02
81	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.11E-02
82	GO:0008194: UDP-glycosyltransferase activity	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	3.34E-07
2	GO:0009535: chloroplast thylakoid membrane	1.51E-04
3	GO:0009574: preprophase band	1.54E-04
4	GO:0033281: TAT protein transport complex	3.29E-04
5	GO:0005871: kinesin complex	4.26E-04
6	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	6.32E-04
7	GO:0030660: Golgi-associated vesicle membrane	6.32E-04
8	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	6.32E-04
9	GO:0009536: plastid	9.67E-04
10	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.57E-03
11	GO:0005874: microtubule	1.64E-03
12	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.02E-03
13	GO:0016604: nuclear body	2.26E-03
14	GO:0005765: lysosomal membrane	2.77E-03
15	GO:0005887: integral component of plasma membrane	4.13E-03
16	GO:0005623: cell	4.36E-03
17	GO:0009524: phragmoplast	4.48E-03
18	GO:0009705: plant-type vacuole membrane	5.85E-03
19	GO:0009504: cell plate	7.95E-03
20	GO:0005694: chromosome	8.73E-03
21	GO:0009295: nucleoid	9.94E-03
22	GO:0009941: chloroplast envelope	1.01E-02
23	GO:0030529: intracellular ribonucleoprotein complex	1.08E-02
24	GO:0005768: endosome	1.24E-02
25	GO:0009707: chloroplast outer membrane	1.30E-02
26	GO:0019005: SCF ubiquitin ligase complex	1.30E-02
27	GO:0005819: spindle	1.64E-02
28	GO:0009570: chloroplast stroma	1.79E-02
29	GO:0005783: endoplasmic reticulum	1.99E-02
30	GO:0016607: nuclear speck	2.62E-02
31	GO:0010008: endosome membrane	2.62E-02
32	GO:0005834: heterotrimeric G-protein complex	2.68E-02
33	GO:0009706: chloroplast inner membrane	2.93E-02
34	GO:0016021: integral component of membrane	3.65E-02
35	GO:0005759: mitochondrial matrix	4.04E-02
36	GO:0005802: trans-Golgi network	4.71E-02