co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G35950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046460: neutral lipid biosynthetic process	0.00E+00
2	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
3	GO:0000372: Group I intron splicing	0.00E+00
4	GO:0043972: histone H3-K23 acetylation	0.00E+00
5	GO:0044154: histone H3-K14 acetylation	0.00E+00
6	GO:0006114: glycerol biosynthetic process	0.00E+00
7	GO:0051322: anaphase	3.29E-05
8	GO:0048657: anther wall tapetum cell differentiation	2.13E-04
9	GO:0000012: single strand break repair	2.13E-04
10	GO:0042547: cell wall modification involved in multidimensional cell growth	2.13E-04
11	GO:0006436: tryptophanyl-tRNA aminoacylation	2.13E-04
12	GO:0000066: mitochondrial ornithine transport	2.13E-04
13	GO:0051171: regulation of nitrogen compound metabolic process	2.13E-04
14	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	2.13E-04
15	GO:0043971: histone H3-K18 acetylation	2.13E-04
16	GO:0000373: Group II intron splicing	2.74E-04
17	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	4.76E-04
18	GO:0006435: threonyl-tRNA aminoacylation	4.76E-04
19	GO:0010207: photosystem II assembly	6.47E-04
20	GO:0001578: microtubule bundle formation	7.74E-04
21	GO:0009793: embryo development ending in seed dormancy	1.08E-03
22	GO:0009800: cinnamic acid biosynthetic process	1.10E-03
23	GO:0010306: rhamnogalacturonan II biosynthetic process	1.10E-03
24	GO:0010255: glucose mediated signaling pathway	1.10E-03
25	GO:0006168: adenine salvage	1.10E-03
26	GO:0006166: purine ribonucleoside salvage	1.10E-03
27	GO:0042989: sequestering of actin monomers	1.10E-03
28	GO:0015846: polyamine transport	1.47E-03
29	GO:0051781: positive regulation of cell division	1.47E-03
30	GO:0007020: microtubule nucleation	1.47E-03
31	GO:0048868: pollen tube development	1.73E-03
32	GO:0010268: brassinosteroid homeostasis	1.73E-03
33	GO:0046785: microtubule polymerization	1.87E-03
34	GO:0030041: actin filament polymerization	1.87E-03
35	GO:0031365: N-terminal protein amino acid modification	1.87E-03
36	GO:0044209: AMP salvage	1.87E-03
37	GO:0010158: abaxial cell fate specification	1.87E-03
38	GO:0006508: proteolysis	2.12E-03
39	GO:0016132: brassinosteroid biosynthetic process	2.13E-03
40	GO:0006559: L-phenylalanine catabolic process	2.31E-03
41	GO:0016125: sterol metabolic process	2.58E-03
42	GO:0034389: lipid particle organization	2.77E-03
43	GO:0000910: cytokinesis	2.90E-03
44	GO:0051510: regulation of unidimensional cell growth	3.26E-03
45	GO:0048528: post-embryonic root development	3.26E-03
46	GO:0010050: vegetative phase change	3.26E-03
47	GO:0009850: auxin metabolic process	3.78E-03
48	GO:0009704: de-etiolation	3.78E-03
49	GO:0048564: photosystem I assembly	3.78E-03
50	GO:0006353: DNA-templated transcription, termination	3.78E-03
51	GO:0070413: trehalose metabolism in response to stress	3.78E-03
52	GO:0009451: RNA modification	4.06E-03
53	GO:0032544: plastid translation	4.33E-03
54	GO:0044030: regulation of DNA methylation	4.33E-03
55	GO:0022900: electron transport chain	4.33E-03
56	GO:0009827: plant-type cell wall modification	4.33E-03
57	GO:0009821: alkaloid biosynthetic process	4.90E-03
58	GO:0090305: nucleic acid phosphodiester bond hydrolysis	4.90E-03
59	GO:0010206: photosystem II repair	4.90E-03
60	GO:0019432: triglyceride biosynthetic process	4.90E-03
61	GO:0010380: regulation of chlorophyll biosynthetic process	5.50E-03
62	GO:0006535: cysteine biosynthetic process from serine	6.12E-03
63	GO:0045037: protein import into chloroplast stroma	7.44E-03
64	GO:0010582: floral meristem determinacy	7.44E-03
65	GO:0009767: photosynthetic electron transport chain	8.13E-03
66	GO:0006302: double-strand break repair	8.84E-03
67	GO:0090351: seedling development	9.58E-03
68	GO:0080188: RNA-directed DNA methylation	9.58E-03
69	GO:0006417: regulation of translation	9.75E-03
70	GO:0006071: glycerol metabolic process	1.03E-02
71	GO:0006289: nucleotide-excision repair	1.11E-02
72	GO:0005992: trehalose biosynthetic process	1.11E-02
73	GO:0019344: cysteine biosynthetic process	1.11E-02
74	GO:0030150: protein import into mitochondrial matrix	1.11E-02
75	GO:0007010: cytoskeleton organization	1.11E-02
76	GO:0010187: negative regulation of seed germination	1.11E-02
77	GO:0010073: meristem maintenance	1.19E-02
78	GO:0006825: copper ion transport	1.19E-02
79	GO:0006418: tRNA aminoacylation for protein translation	1.19E-02
80	GO:0043622: cortical microtubule organization	1.19E-02
81	GO:0015992: proton transport	1.27E-02
82	GO:0009814: defense response, incompatible interaction	1.36E-02
83	GO:0080092: regulation of pollen tube growth	1.36E-02
84	GO:0035428: hexose transmembrane transport	1.36E-02
85	GO:0010584: pollen exine formation	1.53E-02
86	GO:0046323: glucose import	1.81E-02
87	GO:0045489: pectin biosynthetic process	1.81E-02
88	GO:0009790: embryo development	1.84E-02
89	GO:0006633: fatty acid biosynthetic process	1.98E-02
90	GO:0007264: small GTPase mediated signal transduction	2.20E-02
91	GO:0016126: sterol biosynthetic process	2.73E-02
92	GO:0009911: positive regulation of flower development	2.73E-02
93	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.84E-02
94	GO:0016311: dephosphorylation	3.18E-02
95	GO:0048481: plant ovule development	3.30E-02
96	GO:0030244: cellulose biosynthetic process	3.30E-02
97	GO:0009658: chloroplast organization	3.37E-02
98	GO:0042254: ribosome biogenesis	3.43E-02
99	GO:0009834: plant-type secondary cell wall biogenesis	3.54E-02
100	GO:0009860: pollen tube growth	3.63E-02
101	GO:0048527: lateral root development	3.66E-02
102	GO:0007568: aging	3.66E-02
103	GO:0009910: negative regulation of flower development	3.66E-02
104	GO:0006839: mitochondrial transport	4.29E-02
105	GO:0008283: cell proliferation	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0019808: polyamine binding	0.00E+00
2	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
3	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
4	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
5	GO:0004561: alpha-N-acetylglucosaminidase activity	0.00E+00
6	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
7	GO:0004830: tryptophan-tRNA ligase activity	2.13E-04
8	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	2.13E-04
9	GO:0005290: L-histidine transmembrane transporter activity	2.13E-04
10	GO:0004008: copper-exporting ATPase activity	2.13E-04
11	GO:0004518: nuclease activity	2.21E-04
12	GO:0004829: threonine-tRNA ligase activity	4.76E-04
13	GO:0050017: L-3-cyanoalanine synthase activity	4.76E-04
14	GO:0000064: L-ornithine transmembrane transporter activity	4.76E-04
15	GO:0032549: ribonucleoside binding	7.74E-04
16	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	7.74E-04
17	GO:0016805: dipeptidase activity	7.74E-04
18	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	7.74E-04
19	GO:0045548: phenylalanine ammonia-lyase activity	7.74E-04
20	GO:0004176: ATP-dependent peptidase activity	1.07E-03
21	GO:0009678: hydrogen-translocating pyrophosphatase activity	1.10E-03
22	GO:0003999: adenine phosphoribosyltransferase activity	1.10E-03
23	GO:0015189: L-lysine transmembrane transporter activity	1.10E-03
24	GO:0000254: C-4 methylsterol oxidase activity	1.10E-03
25	GO:0015181: arginine transmembrane transporter activity	1.10E-03
26	GO:0070628: proteasome binding	1.47E-03
27	GO:0010385: double-stranded methylated DNA binding	1.47E-03
28	GO:0005471: ATP:ADP antiporter activity	1.87E-03
29	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.87E-03
30	GO:0003785: actin monomer binding	1.87E-03
31	GO:0031593: polyubiquitin binding	2.31E-03
32	GO:0004144: diacylglycerol O-acyltransferase activity	2.77E-03
33	GO:0004124: cysteine synthase activity	2.77E-03
34	GO:0019899: enzyme binding	3.26E-03
35	GO:0008235: metalloexopeptidase activity	3.26E-03
36	GO:0004427: inorganic diphosphatase activity	3.26E-03
37	GO:0043022: ribosome binding	3.78E-03
38	GO:0005375: copper ion transmembrane transporter activity	4.33E-03
39	GO:0016844: strictosidine synthase activity	5.50E-03
40	GO:0004805: trehalose-phosphatase activity	6.12E-03
41	GO:0005089: Rho guanyl-nucleotide exchange factor activity	6.77E-03
42	GO:0008327: methyl-CpG binding	6.77E-03
43	GO:0001054: RNA polymerase I activity	6.77E-03
44	GO:0004177: aminopeptidase activity	6.77E-03
45	GO:0015266: protein channel activity	8.13E-03
46	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	8.13E-03
47	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.03E-02
48	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.03E-02
49	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.03E-02
50	GO:0043130: ubiquitin binding	1.11E-02
51	GO:0051087: chaperone binding	1.19E-02
52	GO:0030570: pectate lyase activity	1.45E-02
53	GO:0003924: GTPase activity	1.48E-02
54	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.62E-02
55	GO:0004812: aminoacyl-tRNA ligase activity	1.62E-02
56	GO:0004519: endonuclease activity	1.65E-02
57	GO:0005525: GTP binding	1.69E-02
58	GO:0004402: histone acetyltransferase activity	1.72E-02
59	GO:0004252: serine-type endopeptidase activity	1.75E-02
60	GO:0004527: exonuclease activity	1.81E-02
61	GO:0008536: Ran GTPase binding	1.81E-02
62	GO:0001085: RNA polymerase II transcription factor binding	1.81E-02
63	GO:0005355: glucose transmembrane transporter activity	1.91E-02
64	GO:0010181: FMN binding	1.91E-02
65	GO:0048038: quinone binding	2.10E-02
66	GO:0005506: iron ion binding	2.25E-02
67	GO:0008017: microtubule binding	2.28E-02
68	GO:0003684: damaged DNA binding	2.41E-02
69	GO:0016791: phosphatase activity	2.41E-02
70	GO:0008237: metallopeptidase activity	2.52E-02
71	GO:0016413: O-acetyltransferase activity	2.62E-02
72	GO:0008236: serine-type peptidase activity	3.18E-02
73	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.30E-02
74	GO:0003682: chromatin binding	3.56E-02
75	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.66E-02
76	GO:0003697: single-stranded DNA binding	3.91E-02
77	GO:0008233: peptidase activity	4.10E-02
78	GO:0004497: monooxygenase activity	4.17E-02
79	GO:0003723: RNA binding	4.29E-02
80	GO:0042393: histone binding	4.29E-02
81	GO:0051537: 2 iron, 2 sulfur cluster binding	4.94E-02
82	GO:0043621: protein self-association	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0009507: chloroplast	5.11E-12
3	GO:0010370: perinucleolar chromocenter	2.13E-04
4	GO:0009535: chloroplast thylakoid membrane	3.03E-04
5	GO:0009574: preprophase band	5.75E-04
6	GO:0005938: cell cortex	5.75E-04
7	GO:0009570: chloroplast stroma	7.22E-04
8	GO:0072686: mitotic spindle	1.87E-03
9	GO:0010005: cortical microtubule, transverse to long axis	2.77E-03
10	GO:0009536: plastid	2.90E-03
11	GO:0030529: intracellular ribonucleoprotein complex	3.07E-03
12	GO:0031305: integral component of mitochondrial inner membrane	3.78E-03
13	GO:0005811: lipid particle	4.33E-03
14	GO:0005720: nuclear heterochromatin	4.90E-03
15	GO:0005736: DNA-directed RNA polymerase I complex	4.90E-03
16	GO:0055028: cortical microtubule	6.12E-03
17	GO:0016324: apical plasma membrane	6.12E-03
18	GO:0005578: proteinaceous extracellular matrix	8.13E-03
19	GO:0016602: CCAAT-binding factor complex	8.13E-03
20	GO:0009532: plastid stroma	1.27E-02
21	GO:0015629: actin cytoskeleton	1.45E-02
22	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.53E-02
23	GO:0009941: chloroplast envelope	1.53E-02
24	GO:0009524: phragmoplast	1.66E-02
25	GO:0005622: intracellular	1.90E-02
26	GO:0005667: transcription factor complex	2.95E-02
27	GO:0009505: plant-type cell wall	3.21E-02
28	GO:0009707: chloroplast outer membrane	3.30E-02
29	GO:0009579: thylakoid	3.81E-02
30	GO:0005874: microtubule	4.03E-02
31	GO:0005819: spindle	4.16E-02
32	GO:0031977: thylakoid lumen	4.41E-02