co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G35760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010203: response to very low fluence red light stimulus	0.00E+00
2	GO:0006114: glycerol biosynthetic process	0.00E+00
3	GO:0033528: S-methylmethionine cycle	0.00E+00
4	GO:1902025: nitrate import	1.31E-04
5	GO:0048657: anther wall tapetum cell differentiation	1.31E-04
6	GO:0000012: single strand break repair	1.31E-04
7	GO:0042547: cell wall modification involved in multidimensional cell growth	1.31E-04
8	GO:0015798: myo-inositol transport	1.31E-04
9	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	1.31E-04
10	GO:0043087: regulation of GTPase activity	1.31E-04
11	GO:0090548: response to nitrate starvation	1.31E-04
12	GO:0000066: mitochondrial ornithine transport	1.31E-04
13	GO:0009793: embryo development ending in seed dormancy	1.89E-04
14	GO:0006435: threonyl-tRNA aminoacylation	3.03E-04
15	GO:0000256: allantoin catabolic process	3.03E-04
16	GO:0010136: ureide catabolic process	4.99E-04
17	GO:0017006: protein-tetrapyrrole linkage	4.99E-04
18	GO:0006166: purine ribonucleoside salvage	7.14E-04
19	GO:0009584: detection of visible light	7.14E-04
20	GO:0006145: purine nucleobase catabolic process	7.14E-04
21	GO:0006168: adenine salvage	7.14E-04
22	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	7.82E-04
23	GO:0010268: brassinosteroid homeostasis	9.05E-04
24	GO:0048442: sepal development	9.47E-04
25	GO:0051322: anaphase	9.47E-04
26	GO:0016132: brassinosteroid biosynthetic process	1.11E-03
27	GO:0007264: small GTPase mediated signal transduction	1.18E-03
28	GO:0044209: AMP salvage	1.20E-03
29	GO:0016125: sterol metabolic process	1.33E-03
30	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.47E-03
31	GO:0006559: L-phenylalanine catabolic process	1.47E-03
32	GO:0016126: sterol biosynthetic process	1.58E-03
33	GO:0010076: maintenance of floral meristem identity	1.76E-03
34	GO:0017148: negative regulation of translation	1.76E-03
35	GO:0009854: oxidative photosynthetic carbon pathway	1.76E-03
36	GO:0010161: red light signaling pathway	2.06E-03
37	GO:0048564: photosystem I assembly	2.39E-03
38	GO:0045010: actin nucleation	2.39E-03
39	GO:0009853: photorespiration	2.59E-03
40	GO:0022900: electron transport chain	2.73E-03
41	GO:0009827: plant-type cell wall modification	2.73E-03
42	GO:0046685: response to arsenic-containing substance	3.08E-03
43	GO:0009821: alkaloid biosynthetic process	3.08E-03
44	GO:0010206: photosystem II repair	3.08E-03
45	GO:0009638: phototropism	3.46E-03
46	GO:0009086: methionine biosynthetic process	3.46E-03
47	GO:0008202: steroid metabolic process	3.46E-03
48	GO:0006468: protein phosphorylation	3.67E-03
49	GO:0006259: DNA metabolic process	3.84E-03
50	GO:0048441: petal development	3.84E-03
51	GO:0006265: DNA topological change	4.24E-03
52	GO:0009585: red, far-red light phototransduction	4.47E-03
53	GO:0006508: proteolysis	4.56E-03
54	GO:0045037: protein import into chloroplast stroma	4.65E-03
55	GO:0009767: photosynthetic electron transport chain	5.08E-03
56	GO:0006302: double-strand break repair	5.52E-03
57	GO:0048440: carpel development	5.52E-03
58	GO:0010207: photosystem II assembly	5.52E-03
59	GO:0090351: seedling development	5.97E-03
60	GO:0006289: nucleotide-excision repair	6.91E-03
61	GO:0010073: meristem maintenance	7.40E-03
62	GO:0006825: copper ion transport	7.40E-03
63	GO:0015992: proton transport	7.91E-03
64	GO:0006730: one-carbon metabolic process	8.42E-03
65	GO:0009814: defense response, incompatible interaction	8.42E-03
66	GO:0031348: negative regulation of defense response	8.42E-03
67	GO:0080092: regulation of pollen tube growth	8.42E-03
68	GO:0010584: pollen exine formation	9.49E-03
69	GO:0048443: stamen development	9.49E-03
70	GO:0045489: pectin biosynthetic process	1.12E-02
71	GO:0006520: cellular amino acid metabolic process	1.12E-02
72	GO:0010197: polar nucleus fusion	1.12E-02
73	GO:0046323: glucose import	1.12E-02
74	GO:0007059: chromosome segregation	1.18E-02
75	GO:0007018: microtubule-based movement	1.18E-02
76	GO:0009738: abscisic acid-activated signaling pathway	1.24E-02
77	GO:0007166: cell surface receptor signaling pathway	1.26E-02
78	GO:0009630: gravitropism	1.36E-02
79	GO:0010090: trichome morphogenesis	1.42E-02
80	GO:0000910: cytokinesis	1.62E-02
81	GO:0009911: positive regulation of flower development	1.68E-02
82	GO:0009658: chloroplast organization	1.71E-02
83	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.75E-02
84	GO:0010029: regulation of seed germination	1.75E-02
85	GO:0048573: photoperiodism, flowering	1.89E-02
86	GO:0016311: dephosphorylation	1.96E-02
87	GO:0030244: cellulose biosynthetic process	2.03E-02
88	GO:0018298: protein-chromophore linkage	2.03E-02
89	GO:0009834: plant-type secondary cell wall biogenesis	2.18E-02
90	GO:0010218: response to far red light	2.18E-02
91	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.19E-02
92	GO:0045087: innate immune response	2.41E-02
93	GO:0006839: mitochondrial transport	2.64E-02
94	GO:0009640: photomorphogenesis	2.88E-02
95	GO:0006281: DNA repair	3.12E-02
96	GO:0000165: MAPK cascade	3.30E-02
97	GO:0008152: metabolic process	3.44E-02
98	GO:0010224: response to UV-B	3.65E-02
99	GO:0006096: glycolytic process	4.01E-02

Rank	GO Term	Adjusted P value
1	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
2	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
3	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
4	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
5	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
6	GO:0050613: delta14-sterol reductase activity	0.00E+00
7	GO:1990055: phenylacetaldehyde synthase activity	0.00E+00
8	GO:0004672: protein kinase activity	4.97E-05
9	GO:0004451: isocitrate lyase activity	1.31E-04
10	GO:0005290: L-histidine transmembrane transporter activity	1.31E-04
11	GO:0004008: copper-exporting ATPase activity	1.31E-04
12	GO:0016618: hydroxypyruvate reductase activity	1.31E-04
13	GO:0031516: far-red light photoreceptor activity	1.31E-04
14	GO:0004837: tyrosine decarboxylase activity	1.31E-04
15	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	3.03E-04
16	GO:0000064: L-ornithine transmembrane transporter activity	3.03E-04
17	GO:0004829: threonine-tRNA ligase activity	3.03E-04
18	GO:0005366: myo-inositol:proton symporter activity	3.03E-04
19	GO:0009883: red or far-red light photoreceptor activity	3.03E-04
20	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	3.03E-04
21	GO:0008430: selenium binding	4.99E-04
22	GO:0004180: carboxypeptidase activity	4.99E-04
23	GO:0004848: ureidoglycolate hydrolase activity	4.99E-04
24	GO:0032549: ribonucleoside binding	4.99E-04
25	GO:0008020: G-protein coupled photoreceptor activity	4.99E-04
26	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	4.99E-04
27	GO:0030267: glyoxylate reductase (NADP) activity	4.99E-04
28	GO:0016805: dipeptidase activity	4.99E-04
29	GO:0015189: L-lysine transmembrane transporter activity	7.14E-04
30	GO:0005354: galactose transmembrane transporter activity	7.14E-04
31	GO:0015181: arginine transmembrane transporter activity	7.14E-04
32	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	7.14E-04
33	GO:0009678: hydrogen-translocating pyrophosphatase activity	7.14E-04
34	GO:0003999: adenine phosphoribosyltransferase activity	7.14E-04
35	GO:0004506: squalene monooxygenase activity	9.47E-04
36	GO:0070628: proteasome binding	9.47E-04
37	GO:0042277: peptide binding	9.47E-04
38	GO:0004518: nuclease activity	1.18E-03
39	GO:0015144: carbohydrate transmembrane transporter activity	1.40E-03
40	GO:0031593: polyubiquitin binding	1.47E-03
41	GO:0005351: sugar:proton symporter activity	1.62E-03
42	GO:0009927: histidine phosphotransfer kinase activity	1.76E-03
43	GO:0008236: serine-type peptidase activity	1.95E-03
44	GO:0004427: inorganic diphosphatase activity	2.06E-03
45	GO:0043022: ribosome binding	2.39E-03
46	GO:0046872: metal ion binding	2.71E-03
47	GO:0008142: oxysterol binding	2.73E-03
48	GO:0005375: copper ion transmembrane transporter activity	2.73E-03
49	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	2.73E-03
50	GO:0016844: strictosidine synthase activity	3.46E-03
51	GO:0004673: protein histidine kinase activity	3.84E-03
52	GO:0005089: Rho guanyl-nucleotide exchange factor activity	4.24E-03
53	GO:0001054: RNA polymerase I activity	4.24E-03
54	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	5.08E-03
55	GO:0008081: phosphoric diester hydrolase activity	5.08E-03
56	GO:0000155: phosphorelay sensor kinase activity	5.08E-03
57	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.52E-03
58	GO:0043130: ubiquitin binding	6.91E-03
59	GO:0005506: iron ion binding	8.07E-03
60	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	8.17E-03
61	GO:0004252: serine-type endopeptidase activity	8.83E-03
62	GO:0030570: pectate lyase activity	8.95E-03
63	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.02E-02
64	GO:0008536: Ran GTPase binding	1.12E-02
65	GO:0004527: exonuclease activity	1.12E-02
66	GO:0008017: microtubule binding	1.15E-02
67	GO:0005355: glucose transmembrane transporter activity	1.18E-02
68	GO:0019901: protein kinase binding	1.24E-02
69	GO:0042802: identical protein binding	1.40E-02
70	GO:0003684: damaged DNA binding	1.49E-02
71	GO:0008237: metallopeptidase activity	1.55E-02
72	GO:0016413: O-acetyltransferase activity	1.62E-02
73	GO:0019825: oxygen binding	2.02E-02
74	GO:0005096: GTPase activator activity	2.11E-02
75	GO:0004497: monooxygenase activity	2.12E-02
76	GO:0004222: metalloendopeptidase activity	2.18E-02
77	GO:0052689: carboxylic ester hydrolase activity	2.34E-02
78	GO:0003697: single-stranded DNA binding	2.41E-02
79	GO:0005525: GTP binding	2.43E-02
80	GO:0016787: hydrolase activity	2.59E-02
81	GO:0004871: signal transducer activity	2.66E-02
82	GO:0042803: protein homodimerization activity	2.66E-02
83	GO:0051537: 2 iron, 2 sulfur cluster binding	3.05E-02
84	GO:0035091: phosphatidylinositol binding	3.05E-02
85	GO:0003924: GTPase activity	3.12E-02
86	GO:0051287: NAD binding	3.30E-02
87	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.56E-02
88	GO:0003690: double-stranded DNA binding	3.65E-02
89	GO:0003777: microtubule motor activity	3.83E-02
90	GO:0016491: oxidoreductase activity	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	1.31E-04
2	GO:0009574: preprophase band	2.95E-04
3	GO:0009507: chloroplast	4.16E-04
4	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	9.47E-04
5	GO:0031209: SCAR complex	1.47E-03
6	GO:0005736: DNA-directed RNA polymerase I complex	3.08E-03
7	GO:0016604: nuclear body	3.46E-03
8	GO:0005856: cytoskeleton	3.73E-03
9	GO:0016324: apical plasma membrane	3.84E-03
10	GO:0030176: integral component of endoplasmic reticulum membrane	5.97E-03
11	GO:0009706: chloroplast inner membrane	6.35E-03
12	GO:0009535: chloroplast thylakoid membrane	8.43E-03
13	GO:0005871: kinesin complex	1.00E-02
14	GO:0005773: vacuole	1.32E-02
15	GO:0046658: anchored component of plasma membrane	1.46E-02
16	GO:0009295: nucleoid	1.55E-02
17	GO:0005874: microtubule	2.04E-02
18	GO:0005783: endoplasmic reticulum	2.23E-02
19	GO:0005622: intracellular	2.67E-02
20	GO:0031977: thylakoid lumen	2.72E-02
21	GO:0005886: plasma membrane	3.44E-02
22	GO:0009536: plastid	4.04E-02
23	GO:0016607: nuclear speck	4.11E-02
24	GO:0005834: heterotrimeric G-protein complex	4.20E-02