co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G35500

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006903: vesicle targeting	0.00E+00
2	GO:1900424: regulation of defense response to bacterium	2.53E-05
3	GO:0015031: protein transport	4.99E-05
4	GO:2000072: regulation of defense response to fungus, incompatible interaction	6.44E-05
5	GO:0030163: protein catabolic process	1.49E-04
6	GO:0006612: protein targeting to membrane	1.69E-04
7	GO:0006893: Golgi to plasma membrane transport	1.69E-04
8	GO:0070676: intralumenal vesicle formation	1.69E-04
9	GO:0033356: UDP-L-arabinose metabolic process	2.30E-04
10	GO:0009846: pollen germination	5.19E-04
11	GO:0006102: isocitrate metabolic process	5.89E-04
12	GO:0060321: acceptance of pollen	6.69E-04
13	GO:0043067: regulation of programmed cell death	8.38E-04
14	GO:0048354: mucilage biosynthetic process involved in seed coat development	8.38E-04
15	GO:0043085: positive regulation of catalytic activity	1.01E-03
16	GO:0006511: ubiquitin-dependent protein catabolic process	1.22E-03
17	GO:0007034: vacuolar transport	1.30E-03
18	GO:0007031: peroxisome organization	1.40E-03
19	GO:0034976: response to endoplasmic reticulum stress	1.50E-03
20	GO:0000027: ribosomal large subunit assembly	1.61E-03
21	GO:0010187: negative regulation of seed germination	1.61E-03
22	GO:0009651: response to salt stress	1.87E-03
23	GO:0042147: retrograde transport, endosome to Golgi	2.30E-03
24	GO:0034220: ion transmembrane transport	2.42E-03
25	GO:0006662: glycerol ether metabolic process	2.55E-03
26	GO:0016192: vesicle-mediated transport	2.58E-03
27	GO:0045454: cell redox homeostasis	2.93E-03
28	GO:0006904: vesicle docking involved in exocytosis	3.48E-03
29	GO:0030244: cellulose biosynthetic process	4.52E-03
30	GO:0009832: plant-type cell wall biogenesis	4.67E-03
31	GO:0010043: response to zinc ion	4.99E-03
32	GO:0009867: jasmonic acid mediated signaling pathway	5.31E-03
33	GO:0045087: innate immune response	5.31E-03
34	GO:0034599: cellular response to oxidative stress	5.47E-03
35	GO:0006099: tricarboxylic acid cycle	5.47E-03
36	GO:0006887: exocytosis	5.98E-03
37	GO:0051603: proteolysis involved in cellular protein catabolic process	7.97E-03
38	GO:0006508: proteolysis	8.34E-03
39	GO:0048316: seed development	8.93E-03
40	GO:0009553: embryo sac development	9.74E-03
41	GO:0009790: embryo development	1.30E-02
42	GO:0006470: protein dephosphorylation	1.61E-02
43	GO:0006810: transport	1.90E-02
44	GO:0046686: response to cadmium ion	2.02E-02
45	GO:0009860: pollen tube growth	2.10E-02
46	GO:0006886: intracellular protein transport	2.70E-02
47	GO:0009408: response to heat	3.07E-02
48	GO:0009734: auxin-activated signaling pathway	3.92E-02
49	GO:0016567: protein ubiquitination	3.94E-02
50	GO:0009735: response to cytokinin	4.33E-02
51	GO:0009555: pollen development	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0004190: aspartic-type endopeptidase activity	3.59E-05
2	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.69E-04
3	GO:0031593: polyubiquitin binding	3.65E-04
4	GO:0008047: enzyme activator activity	9.24E-04
5	GO:0004725: protein tyrosine phosphatase activity	1.50E-03
6	GO:0043130: ubiquitin binding	1.61E-03
7	GO:0004298: threonine-type endopeptidase activity	1.83E-03
8	GO:0003756: protein disulfide isomerase activity	2.18E-03
9	GO:0047134: protein-disulfide reductase activity	2.30E-03
10	GO:0004791: thioredoxin-disulfide reductase activity	2.68E-03
11	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.21E-03
12	GO:0008237: metallopeptidase activity	3.48E-03
13	GO:0015250: water channel activity	3.77E-03
14	GO:0004721: phosphoprotein phosphatase activity	4.21E-03
15	GO:0003746: translation elongation factor activity	5.31E-03
16	GO:0031625: ubiquitin protein ligase binding	8.35E-03
17	GO:0015035: protein disulfide oxidoreductase activity	1.02E-02
18	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.19E-02
19	GO:0008565: protein transporter activity	1.32E-02
20	GO:0042802: identical protein binding	1.73E-02
21	GO:0050660: flavin adenine dinucleotide binding	2.21E-02
22	GO:0008233: peptidase activity	2.30E-02
23	GO:0004497: monooxygenase activity	2.32E-02
24	GO:0061630: ubiquitin protein ligase activity	2.41E-02
25	GO:0004722: protein serine/threonine phosphatase activity	2.82E-02
26	GO:0009055: electron carrier activity	3.23E-02
27	GO:0008289: lipid binding	3.88E-02
28	GO:0016887: ATPase activity	4.19E-02
29	GO:0000166: nucleotide binding	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0030660: Golgi-associated vesicle membrane	2.30E-04
3	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	2.30E-04
4	GO:0005783: endoplasmic reticulum	2.77E-04
5	GO:0030904: retromer complex	3.65E-04
6	GO:0000815: ESCRT III complex	4.36E-04
7	GO:0000502: proteasome complex	5.54E-04
8	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	5.89E-04
9	GO:0005829: cytosol	6.68E-04
10	GO:0000326: protein storage vacuole	6.69E-04
11	GO:0005765: lysosomal membrane	1.01E-03
12	GO:0008541: proteasome regulatory particle, lid subcomplex	1.01E-03
13	GO:0005839: proteasome core complex	1.83E-03
14	GO:0000145: exocyst	3.07E-03
15	GO:0032580: Golgi cisterna membrane	3.34E-03
16	GO:0005789: endoplasmic reticulum membrane	3.44E-03
17	GO:0005778: peroxisomal membrane	3.48E-03
18	GO:0005788: endoplasmic reticulum lumen	3.91E-03
19	GO:0019005: SCF ubiquitin ligase complex	4.52E-03
20	GO:0031902: late endosome membrane	5.98E-03
21	GO:0005856: cytoskeleton	6.85E-03
22	GO:0010008: endosome membrane	8.93E-03
23	GO:0005623: cell	1.19E-02
24	GO:0009524: phragmoplast	1.21E-02
25	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.13E-02
26	GO:0005794: Golgi apparatus	2.35E-02
27	GO:0005887: integral component of plasma membrane	3.82E-02
28	GO:0022626: cytosolic ribosome	4.47E-02