co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G35470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019685: photosynthesis, dark reaction	0.00E+00
2	GO:0045176: apical protein localization	0.00E+00
3	GO:0010068: protoderm histogenesis	0.00E+00
4	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
5	GO:0034757: negative regulation of iron ion transport	1.27E-04
6	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	1.27E-04
7	GO:0043087: regulation of GTPase activity	1.27E-04
8	GO:0043609: regulation of carbon utilization	1.27E-04
9	GO:0006094: gluconeogenesis	2.83E-04
10	GO:0010569: regulation of double-strand break repair via homologous recombination	2.94E-04
11	GO:0010271: regulation of chlorophyll catabolic process	2.94E-04
12	GO:0001736: establishment of planar polarity	2.94E-04
13	GO:0010540: basipetal auxin transport	3.20E-04
14	GO:0009926: auxin polar transport	3.52E-04
15	GO:0009734: auxin-activated signaling pathway	3.66E-04
16	GO:0006000: fructose metabolic process	4.86E-04
17	GO:0080117: secondary growth	4.86E-04
18	GO:0080167: response to karrikin	6.22E-04
19	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.55E-04
20	GO:0006284: base-excision repair	6.94E-04
21	GO:0051639: actin filament network formation	6.95E-04
22	GO:0034059: response to anoxia	6.95E-04
23	GO:0048645: animal organ formation	6.95E-04
24	GO:2001141: regulation of RNA biosynthetic process	6.95E-04
25	GO:0051764: actin crosslink formation	9.21E-04
26	GO:0009956: radial pattern formation	9.21E-04
27	GO:0010583: response to cyclopentenone	1.13E-03
28	GO:0010158: abaxial cell fate specification	1.16E-03
29	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.43E-03
30	GO:0048831: regulation of shoot system development	1.43E-03
31	GO:0048827: phyllome development	1.43E-03
32	GO:0009911: positive regulation of flower development	1.51E-03
33	GO:0009942: longitudinal axis specification	1.71E-03
34	GO:0048509: regulation of meristem development	1.71E-03
35	GO:0048444: floral organ morphogenesis	1.71E-03
36	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.71E-03
37	GO:0010411: xyloglucan metabolic process	1.78E-03
38	GO:0006955: immune response	2.01E-03
39	GO:0010050: vegetative phase change	2.01E-03
40	GO:0019745: pentacyclic triterpenoid biosynthetic process	2.01E-03
41	GO:0009610: response to symbiotic fungus	2.01E-03
42	GO:0000160: phosphorelay signal transduction system	2.06E-03
43	GO:0009850: auxin metabolic process	2.32E-03
44	GO:0009733: response to auxin	2.34E-03
45	GO:0009932: cell tip growth	2.65E-03
46	GO:0006002: fructose 6-phosphate metabolic process	2.65E-03
47	GO:0071482: cellular response to light stimulus	2.65E-03
48	GO:0009657: plastid organization	2.65E-03
49	GO:0010052: guard cell differentiation	2.65E-03
50	GO:0007389: pattern specification process	2.65E-03
51	GO:0006098: pentose-phosphate shunt	3.00E-03
52	GO:0090305: nucleic acid phosphodiester bond hydrolysis	3.00E-03
53	GO:0042546: cell wall biogenesis	3.32E-03
54	GO:0009965: leaf morphogenesis	3.58E-03
55	GO:0006535: cysteine biosynthetic process from serine	3.73E-03
56	GO:0048829: root cap development	3.73E-03
57	GO:0009664: plant-type cell wall organization	3.99E-03
58	GO:0006352: DNA-templated transcription, initiation	4.12E-03
59	GO:0009750: response to fructose	4.12E-03
60	GO:0048765: root hair cell differentiation	4.12E-03
61	GO:0009736: cytokinin-activated signaling pathway	4.29E-03
62	GO:0045037: protein import into chloroplast stroma	4.52E-03
63	GO:0010582: floral meristem determinacy	4.52E-03
64	GO:0010229: inflorescence development	4.93E-03
65	GO:0030036: actin cytoskeleton organization	4.93E-03
66	GO:0010020: chloroplast fission	5.36E-03
67	GO:0009933: meristem structural organization	5.36E-03
68	GO:0010207: photosystem II assembly	5.36E-03
69	GO:0009934: regulation of meristem structural organization	5.36E-03
70	GO:0009825: multidimensional cell growth	5.80E-03
71	GO:0080188: RNA-directed DNA methylation	5.80E-03
72	GO:0010053: root epidermal cell differentiation	5.80E-03
73	GO:0006281: DNA repair	5.91E-03
74	GO:0019344: cysteine biosynthetic process	6.71E-03
75	GO:0007010: cytoskeleton organization	6.71E-03
76	GO:0051017: actin filament bundle assembly	6.71E-03
77	GO:0051302: regulation of cell division	7.19E-03
78	GO:0003333: amino acid transmembrane transport	7.68E-03
79	GO:0016998: cell wall macromolecule catabolic process	7.68E-03
80	GO:0048511: rhythmic process	7.68E-03
81	GO:0071555: cell wall organization	7.74E-03
82	GO:0042744: hydrogen peroxide catabolic process	8.68E-03
83	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	8.69E-03
84	GO:0071215: cellular response to abscisic acid stimulus	8.69E-03
85	GO:0070417: cellular response to cold	9.75E-03
86	GO:0042335: cuticle development	1.03E-02
87	GO:0010087: phloem or xylem histogenesis	1.03E-02
88	GO:0010305: leaf vascular tissue pattern formation	1.09E-02
89	GO:0009958: positive gravitropism	1.09E-02
90	GO:0048868: pollen tube development	1.09E-02
91	GO:0007018: microtubule-based movement	1.14E-02
92	GO:0048825: cotyledon development	1.20E-02
93	GO:0009749: response to glucose	1.20E-02
94	GO:0009416: response to light stimulus	1.23E-02
95	GO:0002229: defense response to oomycetes	1.26E-02
96	GO:0010252: auxin homeostasis	1.44E-02
97	GO:0009828: plant-type cell wall loosening	1.44E-02
98	GO:0071805: potassium ion transmembrane transport	1.50E-02
99	GO:0001666: response to hypoxia	1.63E-02
100	GO:0010029: regulation of seed germination	1.70E-02
101	GO:0009817: defense response to fungus, incompatible interaction	1.97E-02
102	GO:0018298: protein-chromophore linkage	1.97E-02
103	GO:0010311: lateral root formation	2.04E-02
104	GO:0006499: N-terminal protein myristoylation	2.11E-02
105	GO:0046777: protein autophosphorylation	2.17E-02
106	GO:0007568: aging	2.19E-02
107	GO:0006865: amino acid transport	2.26E-02
108	GO:0009793: embryo development ending in seed dormancy	2.72E-02
109	GO:0009744: response to sucrose	2.80E-02
110	GO:0009636: response to toxic substance	3.04E-02
111	GO:0006813: potassium ion transport	3.46E-02
112	GO:0009909: regulation of flower development	3.72E-02
113	GO:0006096: glycolytic process	3.89E-02
114	GO:0043086: negative regulation of catalytic activity	3.89E-02
115	GO:0048367: shoot system development	3.98E-02
116	GO:0009620: response to fungus	4.16E-02
117	GO:0009740: gibberellic acid mediated signaling pathway	4.26E-02
118	GO:0009553: embryo sac development	4.35E-02
119	GO:0009624: response to nematode	4.44E-02
120	GO:0051726: regulation of cell cycle	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0102245: lupan-3beta,20-diol synthase activity	0.00E+00
2	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
3	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
4	GO:0008725: DNA-3-methyladenine glycosylase activity	2.24E-05
5	GO:0042834: peptidoglycan binding	1.27E-04
6	GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity	1.27E-04
7	GO:0005096: GTPase activator activity	1.94E-04
8	GO:0008805: carbon-monoxide oxygenase activity	2.94E-04
9	GO:0009884: cytokinin receptor activity	2.94E-04
10	GO:0050017: L-3-cyanoalanine synthase activity	2.94E-04
11	GO:0005094: Rho GDP-dissociation inhibitor activity	2.94E-04
12	GO:0003913: DNA photolyase activity	4.86E-04
13	GO:0004557: alpha-galactosidase activity	4.86E-04
14	GO:0005034: osmosensor activity	4.86E-04
15	GO:0052692: raffinose alpha-galactosidase activity	4.86E-04
16	GO:0042300: beta-amyrin synthase activity	4.86E-04
17	GO:0042299: lupeol synthase activity	6.95E-04
18	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	9.21E-04
19	GO:0016987: sigma factor activity	9.21E-04
20	GO:0010328: auxin influx transmembrane transporter activity	9.21E-04
21	GO:0001053: plastid sigma factor activity	9.21E-04
22	GO:0010011: auxin binding	9.21E-04
23	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.06E-03
24	GO:0005471: ATP:ADP antiporter activity	1.16E-03
25	GO:0004332: fructose-bisphosphate aldolase activity	1.43E-03
26	GO:2001070: starch binding	1.43E-03
27	GO:0004124: cysteine synthase activity	1.71E-03
28	GO:0019900: kinase binding	1.71E-03
29	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.78E-03
30	GO:0009881: photoreceptor activity	2.01E-03
31	GO:0009672: auxin:proton symporter activity	3.36E-03
32	GO:0043621: protein self-association	3.45E-03
33	GO:0004673: protein histidine kinase activity	3.73E-03
34	GO:0010329: auxin efflux transmembrane transporter activity	4.93E-03
35	GO:0003725: double-stranded RNA binding	4.93E-03
36	GO:0000155: phosphorelay sensor kinase activity	4.93E-03
37	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	6.25E-03
38	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	6.25E-03
39	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	6.25E-03
40	GO:0004857: enzyme inhibitor activity	6.71E-03
41	GO:0043424: protein histidine kinase binding	7.19E-03
42	GO:0015079: potassium ion transmembrane transporter activity	7.19E-03
43	GO:0030570: pectate lyase activity	8.69E-03
44	GO:0004674: protein serine/threonine kinase activity	1.05E-02
45	GO:0008017: microtubule binding	1.10E-02
46	GO:0019901: protein kinase binding	1.20E-02
47	GO:0004518: nuclease activity	1.32E-02
48	GO:0042802: identical protein binding	1.34E-02
49	GO:0000156: phosphorelay response regulator activity	1.38E-02
50	GO:0051015: actin filament binding	1.38E-02
51	GO:0005200: structural constituent of cytoskeleton	1.50E-02
52	GO:0004601: peroxidase activity	1.63E-02
53	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.74E-02
54	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.11E-02
55	GO:0003993: acid phosphatase activity	2.41E-02
56	GO:0004871: signal transducer activity	2.55E-02
57	GO:0035091: phosphatidylinositol binding	2.96E-02
58	GO:0015293: symporter activity	3.04E-02
59	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.46E-02
60	GO:0003777: microtubule motor activity	3.72E-02
61	GO:0015171: amino acid transmembrane transporter activity	3.72E-02
62	GO:0016301: kinase activity	4.57E-02
63	GO:0004672: protein kinase activity	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0035452: extrinsic component of plastid membrane	0.00E+00
2	GO:0032432: actin filament bundle	6.95E-04
3	GO:0005655: nucleolar ribonuclease P complex	1.71E-03
4	GO:0009986: cell surface	2.01E-03
5	GO:0009505: plant-type cell wall	2.84E-03
6	GO:0005884: actin filament	4.12E-03
7	GO:0009574: preprophase band	4.93E-03
8	GO:0005578: proteinaceous extracellular matrix	4.93E-03
9	GO:0005871: kinesin complex	9.75E-03
10	GO:0009536: plastid	1.05E-02
11	GO:0005770: late endosome	1.09E-02
12	GO:0005576: extracellular region	1.56E-02
13	GO:0005874: microtubule	1.96E-02
14	GO:0009707: chloroplast outer membrane	1.97E-02
15	GO:0031225: anchored component of membrane	2.15E-02
16	GO:0009506: plasmodesma	2.84E-02
17	GO:0005886: plasma membrane	2.90E-02
18	GO:0005856: cytoskeleton	3.04E-02
19	GO:0010008: endosome membrane	3.98E-02
20	GO:0009706: chloroplast inner membrane	4.44E-02