GO Enrichment Analysis of Co-expressed Genes with
AT4G35100
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098586: cellular response to virus | 0.00E+00 |
| 2 | GO:0010203: response to very low fluence red light stimulus | 0.00E+00 |
| 3 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 4 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 5 | GO:0051503: adenine nucleotide transport | 0.00E+00 |
| 6 | GO:0009645: response to low light intensity stimulus | 4.01E-05 |
| 7 | GO:0010201: response to continuous far red light stimulus by the high-irradiance response system | 9.50E-05 |
| 8 | GO:0043087: regulation of GTPase activity | 9.50E-05 |
| 9 | GO:0034337: RNA folding | 9.50E-05 |
| 10 | GO:0015969: guanosine tetraphosphate metabolic process | 9.50E-05 |
| 11 | GO:0000481: maturation of 5S rRNA | 9.50E-05 |
| 12 | GO:0015798: myo-inositol transport | 9.50E-05 |
| 13 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.24E-04 |
| 14 | GO:0046741: transport of virus in host, tissue to tissue | 2.24E-04 |
| 15 | GO:0000256: allantoin catabolic process | 2.24E-04 |
| 16 | GO:0090351: seedling development | 2.41E-04 |
| 17 | GO:0000913: preprophase band assembly | 3.73E-04 |
| 18 | GO:0031022: nuclear migration along microfilament | 3.73E-04 |
| 19 | GO:0010136: ureide catabolic process | 3.73E-04 |
| 20 | GO:0017006: protein-tetrapyrrole linkage | 3.73E-04 |
| 21 | GO:0006096: glycolytic process | 3.85E-04 |
| 22 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.37E-04 |
| 23 | GO:0009584: detection of visible light | 5.37E-04 |
| 24 | GO:0046902: regulation of mitochondrial membrane permeability | 5.37E-04 |
| 25 | GO:0006145: purine nucleobase catabolic process | 5.37E-04 |
| 26 | GO:0009226: nucleotide-sugar biosynthetic process | 5.37E-04 |
| 27 | GO:0043572: plastid fission | 5.37E-04 |
| 28 | GO:0007018: microtubule-based movement | 6.38E-04 |
| 29 | GO:0051322: anaphase | 7.14E-04 |
| 30 | GO:0006183: GTP biosynthetic process | 7.14E-04 |
| 31 | GO:0071483: cellular response to blue light | 7.14E-04 |
| 32 | GO:0009904: chloroplast accumulation movement | 9.02E-04 |
| 33 | GO:0000910: cytokinesis | 9.80E-04 |
| 34 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.10E-03 |
| 35 | GO:0010190: cytochrome b6f complex assembly | 1.10E-03 |
| 36 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.10E-03 |
| 37 | GO:0010411: xyloglucan metabolic process | 1.21E-03 |
| 38 | GO:0009612: response to mechanical stimulus | 1.31E-03 |
| 39 | GO:0017148: negative regulation of translation | 1.31E-03 |
| 40 | GO:0009903: chloroplast avoidance movement | 1.31E-03 |
| 41 | GO:0018298: protein-chromophore linkage | 1.33E-03 |
| 42 | GO:0010161: red light signaling pathway | 1.54E-03 |
| 43 | GO:0009658: chloroplast organization | 1.66E-03 |
| 44 | GO:0042255: ribosome assembly | 1.78E-03 |
| 45 | GO:0006353: DNA-templated transcription, termination | 1.78E-03 |
| 46 | GO:0006605: protein targeting | 1.78E-03 |
| 47 | GO:0032508: DNA duplex unwinding | 1.78E-03 |
| 48 | GO:0009932: cell tip growth | 2.03E-03 |
| 49 | GO:0071482: cellular response to light stimulus | 2.03E-03 |
| 50 | GO:0042546: cell wall biogenesis | 2.24E-03 |
| 51 | GO:0046685: response to arsenic-containing substance | 2.29E-03 |
| 52 | GO:0009821: alkaloid biosynthetic process | 2.29E-03 |
| 53 | GO:0010206: photosystem II repair | 2.29E-03 |
| 54 | GO:0006754: ATP biosynthetic process | 2.29E-03 |
| 55 | GO:0000373: Group II intron splicing | 2.29E-03 |
| 56 | GO:0009638: phototropism | 2.56E-03 |
| 57 | GO:0043069: negative regulation of programmed cell death | 2.85E-03 |
| 58 | GO:0009585: red, far-red light phototransduction | 2.89E-03 |
| 59 | GO:0009684: indoleacetic acid biosynthetic process | 3.14E-03 |
| 60 | GO:0006352: DNA-templated transcription, initiation | 3.14E-03 |
| 61 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.14E-03 |
| 62 | GO:0045037: protein import into chloroplast stroma | 3.44E-03 |
| 63 | GO:0006629: lipid metabolic process | 3.56E-03 |
| 64 | GO:0009767: photosynthetic electron transport chain | 3.76E-03 |
| 65 | GO:0005986: sucrose biosynthetic process | 3.76E-03 |
| 66 | GO:0006006: glucose metabolic process | 3.76E-03 |
| 67 | GO:0010020: chloroplast fission | 4.08E-03 |
| 68 | GO:0019253: reductive pentose-phosphate cycle | 4.08E-03 |
| 69 | GO:0071555: cell wall organization | 4.21E-03 |
| 70 | GO:0051302: regulation of cell division | 5.46E-03 |
| 71 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.46E-03 |
| 72 | GO:0010431: seed maturation | 5.83E-03 |
| 73 | GO:0031348: negative regulation of defense response | 6.20E-03 |
| 74 | GO:0006730: one-carbon metabolic process | 6.20E-03 |
| 75 | GO:0009306: protein secretion | 6.98E-03 |
| 76 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 7.38E-03 |
| 77 | GO:0008033: tRNA processing | 7.79E-03 |
| 78 | GO:0048868: pollen tube development | 8.21E-03 |
| 79 | GO:0000302: response to reactive oxygen species | 9.51E-03 |
| 80 | GO:0032502: developmental process | 9.96E-03 |
| 81 | GO:0009630: gravitropism | 9.96E-03 |
| 82 | GO:0010583: response to cyclopentenone | 9.96E-03 |
| 83 | GO:0016032: viral process | 9.96E-03 |
| 84 | GO:0019760: glucosinolate metabolic process | 1.09E-02 |
| 85 | GO:0016126: sterol biosynthetic process | 1.23E-02 |
| 86 | GO:0010027: thylakoid membrane organization | 1.23E-02 |
| 87 | GO:0016311: dephosphorylation | 1.43E-02 |
| 88 | GO:0010218: response to far red light | 1.59E-02 |
| 89 | GO:0009853: photorespiration | 1.76E-02 |
| 90 | GO:0045087: innate immune response | 1.76E-02 |
| 91 | GO:0006631: fatty acid metabolic process | 1.99E-02 |
| 92 | GO:0009744: response to sucrose | 2.10E-02 |
| 93 | GO:0009640: photomorphogenesis | 2.10E-02 |
| 94 | GO:0009644: response to high light intensity | 2.23E-02 |
| 95 | GO:0006855: drug transmembrane transport | 2.35E-02 |
| 96 | GO:0009409: response to cold | 2.64E-02 |
| 97 | GO:0006810: transport | 2.92E-02 |
| 98 | GO:0048367: shoot system development | 3.00E-02 |
| 99 | GO:0048316: seed development | 3.00E-02 |
| 100 | GO:0005975: carbohydrate metabolic process | 3.04E-02 |
| 101 | GO:0055114: oxidation-reduction process | 3.04E-02 |
| 102 | GO:0046686: response to cadmium ion | 3.14E-02 |
| 103 | GO:0009058: biosynthetic process | 4.07E-02 |
| 104 | GO:0009790: embryo development | 4.38E-02 |
| 105 | GO:0055085: transmembrane transport | 4.51E-02 |
| 106 | GO:0006633: fatty acid biosynthetic process | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 2 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 3 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 5 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 6 | GO:0031516: far-red light photoreceptor activity | 9.50E-05 |
| 7 | GO:0080132: fatty acid alpha-hydroxylase activity | 9.50E-05 |
| 8 | GO:0009496: plastoquinol--plastocyanin reductase activity | 9.50E-05 |
| 9 | GO:0080045: quercetin 3'-O-glucosyltransferase activity | 2.24E-04 |
| 10 | GO:0009883: red or far-red light photoreceptor activity | 2.24E-04 |
| 11 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 2.24E-04 |
| 12 | GO:0003938: IMP dehydrogenase activity | 2.24E-04 |
| 13 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.24E-04 |
| 14 | GO:0004802: transketolase activity | 2.24E-04 |
| 15 | GO:0008728: GTP diphosphokinase activity | 2.24E-04 |
| 16 | GO:0005366: myo-inositol:proton symporter activity | 2.24E-04 |
| 17 | GO:0004180: carboxypeptidase activity | 3.73E-04 |
| 18 | GO:0050307: sucrose-phosphate phosphatase activity | 3.73E-04 |
| 19 | GO:0008020: G-protein coupled photoreceptor activity | 3.73E-04 |
| 20 | GO:0001053: plastid sigma factor activity | 7.14E-04 |
| 21 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.14E-04 |
| 22 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 7.14E-04 |
| 23 | GO:0016987: sigma factor activity | 7.14E-04 |
| 24 | GO:0004506: squalene monooxygenase activity | 7.14E-04 |
| 25 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 7.14E-04 |
| 26 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 7.14E-04 |
| 27 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 7.29E-04 |
| 28 | GO:0048038: quinone binding | 7.29E-04 |
| 29 | GO:0005471: ATP:ADP antiporter activity | 9.02E-04 |
| 30 | GO:0008374: O-acyltransferase activity | 9.02E-04 |
| 31 | GO:0004040: amidase activity | 9.02E-04 |
| 32 | GO:0008017: microtubule binding | 1.02E-03 |
| 33 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 1.10E-03 |
| 34 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.21E-03 |
| 35 | GO:0008236: serine-type peptidase activity | 1.27E-03 |
| 36 | GO:0043022: ribosome binding | 1.78E-03 |
| 37 | GO:0004672: protein kinase activity | 1.84E-03 |
| 38 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 2.29E-03 |
| 39 | GO:0030955: potassium ion binding | 2.56E-03 |
| 40 | GO:0016844: strictosidine synthase activity | 2.56E-03 |
| 41 | GO:0004743: pyruvate kinase activity | 2.56E-03 |
| 42 | GO:0004673: protein histidine kinase activity | 2.85E-03 |
| 43 | GO:0003777: microtubule motor activity | 3.20E-03 |
| 44 | GO:0031072: heat shock protein binding | 3.76E-03 |
| 45 | GO:0000155: phosphorelay sensor kinase activity | 3.76E-03 |
| 46 | GO:0004565: beta-galactosidase activity | 3.76E-03 |
| 47 | GO:0008081: phosphoric diester hydrolase activity | 3.76E-03 |
| 48 | GO:0004190: aspartic-type endopeptidase activity | 4.41E-03 |
| 49 | GO:0031409: pigment binding | 4.75E-03 |
| 50 | GO:0016887: ATPase activity | 6.20E-03 |
| 51 | GO:0016491: oxidoreductase activity | 6.39E-03 |
| 52 | GO:0003727: single-stranded RNA binding | 6.98E-03 |
| 53 | GO:0008080: N-acetyltransferase activity | 8.21E-03 |
| 54 | GO:0042802: identical protein binding | 8.97E-03 |
| 55 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.05E-02 |
| 56 | GO:0000287: magnesium ion binding | 1.07E-02 |
| 57 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.14E-02 |
| 58 | GO:0016168: chlorophyll binding | 1.28E-02 |
| 59 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.49E-02 |
| 60 | GO:0005096: GTPase activator activity | 1.54E-02 |
| 61 | GO:0015238: drug transmembrane transporter activity | 1.54E-02 |
| 62 | GO:0042803: protein homodimerization activity | 1.71E-02 |
| 63 | GO:0004871: signal transducer activity | 1.71E-02 |
| 64 | GO:0003824: catalytic activity | 2.03E-02 |
| 65 | GO:0035091: phosphatidylinositol binding | 2.23E-02 |
| 66 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.60E-02 |
| 67 | GO:0003690: double-stranded DNA binding | 2.67E-02 |
| 68 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.14E-02 |
| 69 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.14E-02 |
| 70 | GO:0004650: polygalacturonase activity | 3.14E-02 |
| 71 | GO:0016874: ligase activity | 3.20E-02 |
| 72 | GO:0051082: unfolded protein binding | 3.34E-02 |
| 73 | GO:0019843: rRNA binding | 3.92E-02 |
| 74 | GO:0016829: lyase activity | 4.15E-02 |
| 75 | GO:0004252: serine-type endopeptidase activity | 4.23E-02 |
| 76 | GO:0015144: carbohydrate transmembrane transporter activity | 4.46E-02 |
| 77 | GO:0008565: protein transporter activity | 4.46E-02 |
| 78 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.69E-02 |
| 79 | GO:0015297: antiporter activity | 4.77E-02 |
| 80 | GO:0005351: sugar:proton symporter activity | 4.85E-02 |
| 81 | GO:0016301: kinase activity | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009535: chloroplast thylakoid membrane | 6.65E-07 |
| 2 | GO:0009507: chloroplast | 8.89E-07 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 9.72E-07 |
| 4 | GO:0009782: photosystem I antenna complex | 9.50E-05 |
| 5 | GO:0009574: preprophase band | 1.88E-04 |
| 6 | GO:0005871: kinesin complex | 5.13E-04 |
| 7 | GO:0030660: Golgi-associated vesicle membrane | 7.14E-04 |
| 8 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 7.14E-04 |
| 9 | GO:0009512: cytochrome b6f complex | 9.02E-04 |
| 10 | GO:0005773: vacuole | 1.69E-03 |
| 11 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.78E-03 |
| 12 | GO:0005874: microtubule | 2.08E-03 |
| 13 | GO:0016604: nuclear body | 2.56E-03 |
| 14 | GO:0005765: lysosomal membrane | 3.14E-03 |
| 15 | GO:0032040: small-subunit processome | 3.44E-03 |
| 16 | GO:0009941: chloroplast envelope | 4.36E-03 |
| 17 | GO:0030076: light-harvesting complex | 4.41E-03 |
| 18 | GO:0016020: membrane | 4.75E-03 |
| 19 | GO:0009543: chloroplast thylakoid lumen | 5.12E-03 |
| 20 | GO:0005623: cell | 5.26E-03 |
| 21 | GO:0009524: phragmoplast | 5.39E-03 |
| 22 | GO:0042651: thylakoid membrane | 5.46E-03 |
| 23 | GO:0009505: plant-type cell wall | 5.93E-03 |
| 24 | GO:0009570: chloroplast stroma | 8.35E-03 |
| 25 | GO:0048046: apoplast | 9.00E-03 |
| 26 | GO:0009504: cell plate | 9.06E-03 |
| 27 | GO:0046658: anchored component of plasma membrane | 9.35E-03 |
| 28 | GO:0005694: chromosome | 9.96E-03 |
| 29 | GO:0010319: stromule | 1.14E-02 |
| 30 | GO:0030529: intracellular ribonucleoprotein complex | 1.23E-02 |
| 31 | GO:0031225: anchored component of membrane | 1.30E-02 |
| 32 | GO:0031969: chloroplast membrane | 1.36E-02 |
| 33 | GO:0009707: chloroplast outer membrane | 1.49E-02 |
| 34 | GO:0005819: spindle | 1.87E-02 |
| 35 | GO:0031977: thylakoid lumen | 1.99E-02 |
| 36 | GO:0009536: plastid | 2.33E-02 |
| 37 | GO:0016021: integral component of membrane | 2.70E-02 |
| 38 | GO:0005774: vacuolar membrane | 2.73E-02 |
| 39 | GO:0010008: endosome membrane | 3.00E-02 |
| 40 | GO:0016607: nuclear speck | 3.00E-02 |
| 41 | GO:0005834: heterotrimeric G-protein complex | 3.07E-02 |
| 42 | GO:0005618: cell wall | 3.32E-02 |
| 43 | GO:0009706: chloroplast inner membrane | 3.34E-02 |
| 44 | GO:0010287: plastoglobule | 3.78E-02 |
| 45 | GO:0005759: mitochondrial matrix | 4.61E-02 |
| 46 | GO:0009705: plant-type vacuole membrane | 4.93E-02 |