Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G34760

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032206: positive regulation of telomere maintenance0.00E+00
2GO:0046486: glycerolipid metabolic process0.00E+00
3GO:0006907: pinocytosis0.00E+00
4GO:0070125: mitochondrial translational elongation0.00E+00
5GO:0010081: regulation of inflorescence meristem growth0.00E+00
6GO:0045014: negative regulation of transcription by glucose0.00E+00
7GO:0045176: apical protein localization0.00E+00
8GO:0000372: Group I intron splicing0.00E+00
9GO:0007638: mechanosensory behavior0.00E+00
10GO:0080127: fruit septum development0.00E+00
11GO:0032212: positive regulation of telomere maintenance via telomerase0.00E+00
12GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
13GO:0002949: tRNA threonylcarbamoyladenosine modification0.00E+00
14GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
15GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA0.00E+00
16GO:0000373: Group II intron splicing6.62E-07
17GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.47E-04
18GO:0046620: regulation of organ growth2.12E-04
19GO:0009926: auxin polar transport3.07E-04
20GO:0048497: maintenance of floral organ identity8.17E-04
21GO:0016123: xanthophyll biosynthetic process8.17E-04
22GO:0010582: floral meristem determinacy8.32E-04
23GO:0016554: cytidine to uridine editing1.13E-03
24GO:0010583: response to cyclopentenone1.14E-03
25GO:0043087: regulation of GTPase activity1.21E-03
26GO:0043609: regulation of carbon utilization1.21E-03
27GO:0015904: tetracycline transport1.21E-03
28GO:0051013: microtubule severing1.21E-03
29GO:0034757: negative regulation of iron ion transport1.21E-03
30GO:0010726: positive regulation of hydrogen peroxide metabolic process1.21E-03
31GO:0070509: calcium ion import1.21E-03
32GO:0006438: valyl-tRNA aminoacylation1.21E-03
33GO:0032958: inositol phosphate biosynthetic process1.21E-03
34GO:0010080: regulation of floral meristem growth1.21E-03
35GO:0009733: response to auxin1.91E-03
36GO:0009736: cytokinin-activated signaling pathway2.38E-03
37GO:0000105: histidine biosynthetic process2.39E-03
38GO:0006650: glycerophospholipid metabolic process2.67E-03
39GO:0001736: establishment of planar polarity2.67E-03
40GO:0080009: mRNA methylation2.67E-03
41GO:0009786: regulation of asymmetric cell division2.67E-03
42GO:0031648: protein destabilization2.67E-03
43GO:2000123: positive regulation of stomatal complex development2.67E-03
44GO:0010024: phytochromobilin biosynthetic process2.67E-03
45GO:0043039: tRNA aminoacylation2.67E-03
46GO:0048255: mRNA stabilization2.67E-03
47GO:0061062: regulation of nematode larval development2.67E-03
48GO:0010271: regulation of chlorophyll catabolic process2.67E-03
49GO:0007186: G-protein coupled receptor signaling pathway2.93E-03
50GO:0009657: plastid organization2.93E-03
51GO:0000160: phosphorelay signal transduction system3.00E-03
52GO:0009734: auxin-activated signaling pathway3.23E-03
53GO:1900865: chloroplast RNA modification4.20E-03
54GO:0009958: positive gravitropism4.32E-03
55GO:0071398: cellular response to fatty acid4.45E-03
56GO:0030029: actin filament-based process4.45E-03
57GO:0045910: negative regulation of DNA recombination4.45E-03
58GO:0090506: axillary shoot meristem initiation4.45E-03
59GO:0080117: secondary growth4.45E-03
60GO:0006000: fructose metabolic process4.45E-03
61GO:0046168: glycerol-3-phosphate catabolic process4.45E-03
62GO:0080055: low-affinity nitrate transport4.45E-03
63GO:0010022: meristem determinacy4.45E-03
64GO:0048829: root cap development4.92E-03
65GO:0006949: syncytium formation4.92E-03
66GO:0006782: protoporphyrinogen IX biosynthetic process4.92E-03
67GO:0048825: cotyledon development5.20E-03
68GO:0009416: response to light stimulus5.84E-03
69GO:1990019: protein storage vacuole organization6.52E-03
70GO:0010321: regulation of vegetative phase change6.52E-03
71GO:0045017: glycerolipid biosynthetic process6.52E-03
72GO:0010371: regulation of gibberellin biosynthetic process6.52E-03
73GO:0006020: inositol metabolic process6.52E-03
74GO:0051513: regulation of monopolar cell growth6.52E-03
75GO:0007231: osmosensory signaling pathway6.52E-03
76GO:0051639: actin filament network formation6.52E-03
77GO:0034059: response to anoxia6.52E-03
78GO:0010239: chloroplast mRNA processing6.52E-03
79GO:0009800: cinnamic acid biosynthetic process6.52E-03
80GO:0044211: CTP salvage6.52E-03
81GO:0007276: gamete generation6.52E-03
82GO:0006072: glycerol-3-phosphate metabolic process6.52E-03
83GO:0006424: glutamyl-tRNA aminoacylation6.52E-03
84GO:2000904: regulation of starch metabolic process6.52E-03
85GO:0045037: protein import into chloroplast stroma6.56E-03
86GO:0071555: cell wall organization6.95E-03
87GO:0009828: plant-type cell wall loosening7.29E-03
88GO:0009725: response to hormone7.48E-03
89GO:0010540: basipetal auxin transport8.47E-03
90GO:0008295: spermidine biosynthetic process8.86E-03
91GO:0044206: UMP salvage8.86E-03
92GO:0009956: radial pattern formation8.86E-03
93GO:0009755: hormone-mediated signaling pathway8.86E-03
94GO:0051764: actin crosslink formation8.86E-03
95GO:0009765: photosynthesis, light harvesting8.86E-03
96GO:0033500: carbohydrate homeostasis8.86E-03
97GO:2000038: regulation of stomatal complex development8.86E-03
98GO:0042991: transcription factor import into nucleus8.86E-03
99GO:0006021: inositol biosynthetic process8.86E-03
100GO:0070588: calcium ion transmembrane transport9.53E-03
101GO:0009825: multidimensional cell growth9.53E-03
102GO:0009793: embryo development ending in seed dormancy9.57E-03
103GO:0040008: regulation of growth1.08E-02
104GO:0045487: gibberellin catabolic process1.15E-02
105GO:0009107: lipoate biosynthetic process1.15E-02
106GO:0010438: cellular response to sulfur starvation1.15E-02
107GO:0010158: abaxial cell fate specification1.15E-02
108GO:0080110: sporopollenin biosynthetic process1.15E-02
109GO:0010375: stomatal complex patterning1.15E-02
110GO:0009696: salicylic acid metabolic process1.15E-02
111GO:0016120: carotene biosynthetic process1.15E-02
112GO:0005992: trehalose biosynthetic process1.18E-02
113GO:0051017: actin filament bundle assembly1.18E-02
114GO:0009451: RNA modification1.22E-02
115GO:0010942: positive regulation of cell death1.43E-02
116GO:0048827: phyllome development1.43E-02
117GO:0009913: epidermal cell differentiation1.43E-02
118GO:0010358: leaf shaping1.43E-02
119GO:1902456: regulation of stomatal opening1.43E-02
120GO:0048831: regulation of shoot system development1.43E-02
121GO:0003006: developmental process involved in reproduction1.43E-02
122GO:0009920: cell plate formation involved in plant-type cell wall biogenesis1.43E-02
123GO:0006559: L-phenylalanine catabolic process1.43E-02
124GO:0006206: pyrimidine nucleobase metabolic process1.43E-02
125GO:0006865: amino acid transport1.65E-02
126GO:0030488: tRNA methylation1.73E-02
127GO:0031930: mitochondria-nucleus signaling pathway1.73E-02
128GO:0009861: jasmonic acid and ethylene-dependent systemic resistance1.73E-02
129GO:0010019: chloroplast-nucleus signaling pathway1.73E-02
130GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity1.73E-02
131GO:0009648: photoperiodism1.73E-02
132GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.73E-02
133GO:0071215: cellular response to abscisic acid stimulus1.73E-02
134GO:0009942: longitudinal axis specification1.73E-02
135GO:0009686: gibberellin biosynthetic process1.73E-02
136GO:0048509: regulation of meristem development1.73E-02
137GO:0006468: protein phosphorylation1.87E-02
138GO:0045892: negative regulation of transcription, DNA-templated1.88E-02
139GO:0010091: trichome branching1.89E-02
140GO:0042127: regulation of cell proliferation1.89E-02
141GO:0016117: carotenoid biosynthetic process2.05E-02
142GO:0000082: G1/S transition of mitotic cell cycle2.06E-02
143GO:0015693: magnesium ion transport2.06E-02
144GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway2.06E-02
145GO:0009610: response to symbiotic fungus2.06E-02
146GO:0006955: immune response2.06E-02
147GO:0048528: post-embryonic root development2.06E-02
148GO:1900056: negative regulation of leaf senescence2.06E-02
149GO:0010098: suspensor development2.06E-02
150GO:0010050: vegetative phase change2.06E-02
151GO:0010444: guard mother cell differentiation2.06E-02
152GO:0030001: metal ion transport2.07E-02
153GO:0010087: phloem or xylem histogenesis2.22E-02
154GO:0009826: unidimensional cell growth2.33E-02
155GO:0010305: leaf vascular tissue pattern formation2.39E-02
156GO:0009741: response to brassinosteroid2.39E-02
157GO:2000070: regulation of response to water deprivation2.40E-02
158GO:0010492: maintenance of shoot apical meristem identity2.40E-02
159GO:0006402: mRNA catabolic process2.40E-02
160GO:0010439: regulation of glucosinolate biosynthetic process2.40E-02
161GO:0009850: auxin metabolic process2.40E-02
162GO:0009819: drought recovery2.40E-02
163GO:0009690: cytokinin metabolic process2.40E-02
164GO:0009744: response to sucrose2.42E-02
165GO:0009658: chloroplast organization2.49E-02
166GO:0042546: cell wall biogenesis2.55E-02
167GO:0007018: microtubule-based movement2.57E-02
168GO:0007389: pattern specification process2.77E-02
169GO:0006002: fructose 6-phosphate metabolic process2.77E-02
170GO:0071482: cellular response to light stimulus2.77E-02
171GO:0010497: plasmodesmata-mediated intercellular transport2.77E-02
172GO:0032544: plastid translation2.77E-02
173GO:0071554: cell wall organization or biogenesis2.96E-02
174GO:0048589: developmental growth3.15E-02
175GO:0009056: catabolic process3.15E-02
176GO:0051865: protein autoubiquitination3.15E-02
177GO:0006098: pentose-phosphate shunt3.15E-02
178GO:0046916: cellular transition metal ion homeostasis3.15E-02
179GO:0048507: meristem development3.15E-02
180GO:0032502: developmental process3.16E-02
181GO:0031047: gene silencing by RNA3.16E-02
182GO:0009664: plant-type cell wall organization3.23E-02
183GO:0016573: histone acetylation3.55E-02
184GO:0009638: phototropism3.55E-02
185GO:0006779: porphyrin-containing compound biosynthetic process3.55E-02
186GO:0000723: telomere maintenance3.55E-02
187GO:0042761: very long-chain fatty acid biosynthetic process3.55E-02
188GO:0009098: leucine biosynthetic process3.55E-02
189GO:0016571: histone methylation3.55E-02
190GO:0010018: far-red light signaling pathway3.55E-02
191GO:0009639: response to red or far red light3.59E-02
192GO:0009641: shade avoidance3.96E-02
193GO:0006298: mismatch repair3.96E-02
194GO:0016441: posttranscriptional gene silencing3.96E-02
195GO:0010192: mucilage biosynthetic process3.96E-02
196GO:0031627: telomeric loop formation3.96E-02
197GO:0009299: mRNA transcription3.96E-02
198GO:0009870: defense response signaling pathway, resistance gene-dependent3.96E-02
199GO:0006535: cysteine biosynthetic process from serine3.96E-02
200GO:0009750: response to fructose4.39E-02
201GO:0006415: translational termination4.39E-02
202GO:0048765: root hair cell differentiation4.39E-02
203GO:0006816: calcium ion transport4.39E-02
204GO:0009682: induced systemic resistance4.39E-02
205GO:0008285: negative regulation of cell proliferation4.39E-02
206GO:0048316: seed development4.51E-02
207GO:0009627: systemic acquired resistance4.77E-02
208GO:0006790: sulfur compound metabolic process4.84E-02
209GO:0010152: pollen maturation4.84E-02
210GO:0005983: starch catabolic process4.84E-02
211GO:0010105: negative regulation of ethylene-activated signaling pathway4.84E-02
RankGO TermAdjusted P value
1GO:0004401: histidinol-phosphatase activity0.00E+00
2GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor0.00E+00
3GO:0047793: cycloeucalenol cycloisomerase activity0.00E+00
4GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
5GO:0052834: inositol monophosphate phosphatase activity0.00E+00
6GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity0.00E+00
7GO:0071633: dihydroceramidase activity0.00E+00
8GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
9GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
10GO:0061711: N(6)-L-threonylcarbamoyladenine synthase0.00E+00
11GO:0045435: lycopene epsilon cyclase activity0.00E+00
12GO:0008805: carbon-monoxide oxygenase activity5.76E-05
13GO:0003723: RNA binding1.50E-04
14GO:0001872: (1->3)-beta-D-glucan binding3.42E-04
15GO:0010011: auxin binding5.56E-04
16GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity1.21E-03
17GO:0052381: tRNA dimethylallyltransferase activity1.21E-03
18GO:0033857: diphosphoinositol-pentakisphosphate kinase activity1.21E-03
19GO:0010347: L-galactose-1-phosphate phosphatase activity1.21E-03
20GO:0010012: steroid 22-alpha hydroxylase activity1.21E-03
21GO:0000829: inositol heptakisphosphate kinase activity1.21E-03
22GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity1.21E-03
23GO:0047259: glucomannan 4-beta-mannosyltransferase activity1.21E-03
24GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity1.21E-03
25GO:0005227: calcium activated cation channel activity1.21E-03
26GO:0042834: peptidoglycan binding1.21E-03
27GO:0004818: glutamate-tRNA ligase activity1.21E-03
28GO:0008568: microtubule-severing ATPase activity1.21E-03
29GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity1.21E-03
30GO:0000828: inositol hexakisphosphate kinase activity1.21E-03
31GO:0004832: valine-tRNA ligase activity1.21E-03
32GO:0004519: endonuclease activity1.65E-03
33GO:0050736: O-malonyltransferase activity2.67E-03
34GO:0009884: cytokinin receptor activity2.67E-03
35GO:0050017: L-3-cyanoalanine synthase activity2.67E-03
36GO:0017118: lipoyltransferase activity2.67E-03
37GO:0003852: 2-isopropylmalate synthase activity2.67E-03
38GO:0045543: gibberellin 2-beta-dioxygenase activity2.67E-03
39GO:0043425: bHLH transcription factor binding2.67E-03
40GO:0010296: prenylcysteine methylesterase activity2.67E-03
41GO:0016415: octanoyltransferase activity2.67E-03
42GO:0004047: aminomethyltransferase activity2.67E-03
43GO:0004766: spermidine synthase activity2.67E-03
44GO:0052832: inositol monophosphate 3-phosphatase activity2.67E-03
45GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity2.67E-03
46GO:0004109: coproporphyrinogen oxidase activity2.67E-03
47GO:0019156: isoamylase activity2.67E-03
48GO:0008934: inositol monophosphate 1-phosphatase activity2.67E-03
49GO:0008493: tetracycline transporter activity2.67E-03
50GO:0052833: inositol monophosphate 4-phosphatase activity2.67E-03
51GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity2.67E-03
52GO:0005034: osmosensor activity4.45E-03
53GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity4.45E-03
54GO:0016707: gibberellin 3-beta-dioxygenase activity4.45E-03
55GO:0080054: low-affinity nitrate transmembrane transporter activity4.45E-03
56GO:0045548: phenylalanine ammonia-lyase activity4.45E-03
57GO:0003913: DNA photolyase activity4.45E-03
58GO:0004148: dihydrolipoyl dehydrogenase activity4.45E-03
59GO:0004805: trehalose-phosphatase activity4.92E-03
60GO:0080031: methyl salicylate esterase activity6.52E-03
61GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity6.52E-03
62GO:0043047: single-stranded telomeric DNA binding6.52E-03
63GO:0016149: translation release factor activity, codon specific6.52E-03
64GO:0000156: phosphorelay response regulator activity6.73E-03
65GO:0004871: signal transducer activity7.25E-03
66GO:0005262: calcium channel activity7.48E-03
67GO:0004930: G-protein coupled receptor activity8.86E-03
68GO:0004845: uracil phosphoribosyltransferase activity8.86E-03
69GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed8.86E-03
70GO:0010328: auxin influx transmembrane transporter activity8.86E-03
71GO:0019199: transmembrane receptor protein kinase activity8.86E-03
72GO:0016301: kinase activity9.57E-03
73GO:0004674: protein serine/threonine kinase activity1.03E-02
74GO:0005471: ATP:ADP antiporter activity1.15E-02
75GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.15E-02
76GO:0008725: DNA-3-methyladenine glycosylase activity1.15E-02
77GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.17E-02
78GO:0005096: GTPase activator activity1.38E-02
79GO:2001070: starch binding1.43E-02
80GO:0030983: mismatched DNA binding1.43E-02
81GO:0080030: methyl indole-3-acetate esterase activity1.43E-02
82GO:0004332: fructose-bisphosphate aldolase activity1.43E-02
83GO:0004709: MAP kinase kinase kinase activity1.43E-02
84GO:0004556: alpha-amylase activity1.43E-02
85GO:0003779: actin binding1.54E-02
86GO:0019900: kinase binding1.73E-02
87GO:0004124: cysteine synthase activity1.73E-02
88GO:0051753: mannan synthase activity1.73E-02
89GO:0030570: pectate lyase activity1.73E-02
90GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.73E-02
91GO:0004849: uridine kinase activity1.73E-02
92GO:0016832: aldehyde-lyase activity1.73E-02
93GO:0042162: telomeric DNA binding2.06E-02
94GO:0009881: photoreceptor activity2.06E-02
95GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity2.39E-02
96GO:0016788: hydrolase activity, acting on ester bonds2.57E-02
97GO:0043621: protein self-association2.68E-02
98GO:0019901: protein kinase binding2.76E-02
99GO:0003724: RNA helicase activity2.77E-02
100GO:0046914: transition metal ion binding2.77E-02
101GO:0016762: xyloglucan:xyloglucosyl transferase activity2.96E-02
102GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity3.15E-02
103GO:0003747: translation release factor activity3.15E-02
104GO:0051015: actin filament binding3.37E-02
105GO:0009672: auxin:proton symporter activity3.55E-02
106GO:0016759: cellulose synthase activity3.59E-02
107GO:0005200: structural constituent of cytoskeleton3.81E-02
108GO:0008017: microtubule binding3.90E-02
109GO:0004673: protein histidine kinase activity3.96E-02
110GO:0003777: microtubule motor activity4.00E-02
111GO:0015171: amino acid transmembrane transporter activity4.00E-02
112GO:0016413: O-acetyltransferase activity4.04E-02
113GO:0052689: carboxylic ester hydrolase activity4.21E-02
114GO:0003691: double-stranded telomeric DNA binding4.39E-02
115GO:0005089: Rho guanyl-nucleotide exchange factor activity4.39E-02
116GO:0000049: tRNA binding4.84E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0035452: extrinsic component of plastid membrane0.00E+00
3GO:0000408: EKC/KEOPS complex0.00E+00
4GO:0009537: proplastid0.00E+00
5GO:0005886: plasma membrane1.17E-04
6GO:0009507: chloroplast4.88E-04
7GO:0000791: euchromatin1.21E-03
8GO:0009986: cell surface1.91E-03
9GO:0005697: telomerase holoenzyme complex2.67E-03
10GO:0009513: etioplast2.67E-03
11GO:0009569: chloroplast starch grain2.67E-03
12GO:0030870: Mre11 complex2.67E-03
13GO:0009509: chromoplast4.45E-03
14GO:0030139: endocytic vesicle4.45E-03
15GO:0032585: multivesicular body membrane6.52E-03
16GO:0032432: actin filament bundle6.52E-03
17GO:0009331: glycerol-3-phosphate dehydrogenase complex6.52E-03
18GO:0030529: intracellular ribonucleoprotein complex9.17E-03
19GO:0000795: synaptonemal complex1.15E-02
20GO:0009707: chloroplast outer membrane1.29E-02
21GO:0009941: chloroplast envelope1.58E-02
22GO:0015629: actin cytoskeleton1.73E-02
23GO:0046658: anchored component of plasma membrane1.91E-02
24GO:0005871: kinesin complex2.05E-02
25GO:0031305: integral component of mitochondrial inner membrane2.40E-02
26GO:0009501: amyloplast2.40E-02
27GO:0000784: nuclear chromosome, telomeric region2.77E-02
28GO:0000783: nuclear telomere cap complex2.77E-02
29GO:0009570: chloroplast stroma2.93E-02
30GO:0010494: cytoplasmic stress granule3.15E-02
31GO:0005874: microtubule3.37E-02
32GO:0016459: myosin complex3.96E-02
33GO:0005884: actin filament4.39E-02
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Gene type



Gene DE type