co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G34610

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.24E-07
2	GO:0006000: fructose metabolic process	4.81E-07
3	GO:0010021: amylopectin biosynthetic process	2.26E-06
4	GO:0006002: fructose 6-phosphate metabolic process	2.05E-05
5	GO:0019276: UDP-N-acetylgalactosamine metabolic process	4.45E-05
6	GO:0006047: UDP-N-acetylglucosamine metabolic process	4.45E-05
7	GO:0005983: starch catabolic process	5.40E-05
8	GO:0006094: gluconeogenesis	6.27E-05
9	GO:0005986: sucrose biosynthetic process	6.27E-05
10	GO:0010353: response to trehalose	1.10E-04
11	GO:0015804: neutral amino acid transport	1.10E-04
12	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	1.89E-04
13	GO:0019252: starch biosynthetic process	2.57E-04
14	GO:0006109: regulation of carbohydrate metabolic process	3.73E-04
15	GO:0006656: phosphatidylcholine biosynthetic process	4.75E-04
16	GO:0015979: photosynthesis	7.40E-04
17	GO:0009610: response to symbiotic fungus	8.11E-04
18	GO:0010196: nonphotochemical quenching	8.11E-04
19	GO:0030091: protein repair	9.32E-04
20	GO:0005978: glycogen biosynthetic process	9.32E-04
21	GO:0009642: response to light intensity	9.32E-04
22	GO:0042761: very long-chain fatty acid biosynthetic process	1.32E-03
23	GO:0005982: starch metabolic process	1.32E-03
24	GO:0043085: positive regulation of catalytic activity	1.61E-03
25	GO:0009750: response to fructose	1.61E-03
26	GO:0009773: photosynthetic electron transport in photosystem I	1.61E-03
27	GO:0018107: peptidyl-threonine phosphorylation	1.92E-03
28	GO:0019253: reductive pentose-phosphate cycle	2.09E-03
29	GO:0005985: sucrose metabolic process	2.25E-03
30	GO:0006636: unsaturated fatty acid biosynthetic process	2.42E-03
31	GO:0009695: jasmonic acid biosynthetic process	2.77E-03
32	GO:0055114: oxidation-reduction process	2.78E-03
33	GO:0031408: oxylipin biosynthetic process	2.96E-03
34	GO:0003333: amino acid transmembrane transport	2.96E-03
35	GO:0051260: protein homooligomerization	2.96E-03
36	GO:0061077: chaperone-mediated protein folding	2.96E-03
37	GO:0019748: secondary metabolic process	3.14E-03
38	GO:0006606: protein import into nucleus	3.93E-03
39	GO:0006662: glycerol ether metabolic process	4.14E-03
40	GO:0045454: cell redox homeostasis	5.99E-03
41	GO:0015995: chlorophyll biosynthetic process	6.89E-03
42	GO:0032259: methylation	7.07E-03
43	GO:0016311: dephosphorylation	7.14E-03
44	GO:0009817: defense response to fungus, incompatible interaction	7.39E-03
45	GO:0007568: aging	8.18E-03
46	GO:0009631: cold acclimation	8.18E-03
47	GO:0006810: transport	8.23E-03
48	GO:0006865: amino acid transport	8.44E-03
49	GO:0034599: cellular response to oxidative stress	8.99E-03
50	GO:0009735: response to cytokinin	1.20E-02
51	GO:0006813: potassium ion transport	1.28E-02
52	GO:0043086: negative regulation of catalytic activity	1.45E-02
53	GO:0009553: embryo sac development	1.61E-02
54	GO:0018105: peptidyl-serine phosphorylation	1.68E-02
55	GO:0009739: response to gibberellin	2.63E-02
56	GO:0006979: response to oxidative stress	2.68E-02
57	GO:0009409: response to cold	3.60E-02
58	GO:0009723: response to ethylene	3.68E-02
59	GO:0044550: secondary metabolite biosynthetic process	4.11E-02

Rank	GO Term	Adjusted P value
1	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
2	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
3	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.24E-07
4	GO:0004321: fatty-acyl-CoA synthase activity	4.45E-05
5	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	4.45E-05
6	GO:0050521: alpha-glucan, water dikinase activity	4.45E-05
7	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	4.45E-05
8	GO:0018708: thiol S-methyltransferase activity	1.10E-04
9	GO:0003844: 1,4-alpha-glucan branching enzyme activity	1.10E-04
10	GO:0000234: phosphoethanolamine N-methyltransferase activity	1.10E-04
11	GO:0015172: acidic amino acid transmembrane transporter activity	1.10E-04
12	GO:0016868: intramolecular transferase activity, phosphotransferases	1.10E-04
13	GO:0033201: alpha-1,4-glucan synthase activity	1.10E-04
14	GO:0004324: ferredoxin-NADP+ reductase activity	1.89E-04
15	GO:0010277: chlorophyllide a oxygenase [overall] activity	1.89E-04
16	GO:0043169: cation binding	1.89E-04
17	GO:0004373: glycogen (starch) synthase activity	1.89E-04
18	GO:0019201: nucleotide kinase activity	2.78E-04
19	GO:0015175: neutral amino acid transmembrane transporter activity	2.78E-04
20	GO:0009011: starch synthase activity	3.73E-04
21	GO:0003959: NADPH dehydrogenase activity	4.75E-04
22	GO:0008200: ion channel inhibitor activity	5.82E-04
23	GO:0004017: adenylate kinase activity	6.94E-04
24	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	6.94E-04
25	GO:0004033: aldo-keto reductase (NADP) activity	9.32E-04
26	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.06E-03
27	GO:0016207: 4-coumarate-CoA ligase activity	1.19E-03
28	GO:0016491: oxidoreductase activity	1.38E-03
29	GO:0008047: enzyme activator activity	1.47E-03
30	GO:0044183: protein binding involved in protein folding	1.61E-03
31	GO:0047372: acylglycerol lipase activity	1.61E-03
32	GO:0015386: potassium:proton antiporter activity	1.61E-03
33	GO:0008266: poly(U) RNA binding	2.09E-03
34	GO:0004857: enzyme inhibitor activity	2.60E-03
35	GO:0005528: FK506 binding	2.60E-03
36	GO:0015079: potassium ion transmembrane transporter activity	2.77E-03
37	GO:0016787: hydrolase activity	2.89E-03
38	GO:0016779: nucleotidyltransferase activity	3.14E-03
39	GO:0047134: protein-disulfide reductase activity	3.73E-03
40	GO:0005249: voltage-gated potassium channel activity	3.93E-03
41	GO:0004791: thioredoxin-disulfide reductase activity	4.35E-03
42	GO:0048038: quinone binding	4.77E-03
43	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	5.22E-03
44	GO:0003746: translation elongation factor activity	8.71E-03
45	GO:0004185: serine-type carboxypeptidase activity	1.04E-02
46	GO:0051537: 2 iron, 2 sulfur cluster binding	1.10E-02
47	GO:0015293: symporter activity	1.13E-02
48	GO:0005198: structural molecule activity	1.13E-02
49	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.16E-02
50	GO:0015171: amino acid transmembrane transporter activity	1.38E-02
51	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.48E-02
52	GO:0016874: ligase activity	1.58E-02
53	GO:0015035: protein disulfide oxidoreductase activity	1.68E-02
54	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.97E-02
55	GO:0008565: protein transporter activity	2.20E-02
56	GO:0005506: iron ion binding	2.62E-02
57	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.88E-02
58	GO:0008168: methyltransferase activity	3.23E-02
59	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.46E-12
2	GO:0009534: chloroplast thylakoid	7.48E-12
3	GO:0009535: chloroplast thylakoid membrane	1.18E-11
4	GO:0009570: chloroplast stroma	6.88E-06
5	GO:0009501: amyloplast	1.59E-05
6	GO:0042651: thylakoid membrane	1.17E-04
7	GO:0009941: chloroplast envelope	1.18E-04
8	GO:0010287: plastoglobule	1.62E-04
9	GO:0008076: voltage-gated potassium channel complex	2.78E-04
10	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.19E-03
11	GO:0005875: microtubule associated complex	2.42E-03
12	GO:0031969: chloroplast membrane	5.00E-03
13	GO:0010319: stromule	5.68E-03
14	GO:0009579: thylakoid	1.57E-02
15	GO:0009706: chloroplast inner membrane	1.65E-02
16	GO:0009543: chloroplast thylakoid lumen	1.93E-02
17	GO:0005623: cell	1.97E-02
18	GO:0016020: membrane	2.60E-02