co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G34310

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010055: atrichoblast differentiation	0.00E+00
2	GO:0097237: cellular response to toxic substance	0.00E+00
3	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
4	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
5	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
6	GO:0010112: regulation of systemic acquired resistance	7.03E-08
7	GO:0010311: lateral root formation	1.14E-05
8	GO:0080173: male-female gamete recognition during double fertilization	3.12E-05
9	GO:0009700: indole phytoalexin biosynthetic process	3.12E-05
10	GO:0034214: protein hexamerization	3.12E-05
11	GO:0032107: regulation of response to nutrient levels	3.12E-05
12	GO:0009838: abscission	7.88E-05
13	GO:0050684: regulation of mRNA processing	7.88E-05
14	GO:0019521: D-gluconate metabolic process	7.88E-05
15	GO:0032784: regulation of DNA-templated transcription, elongation	1.37E-04
16	GO:0010366: negative regulation of ethylene biosynthetic process	1.37E-04
17	GO:0009611: response to wounding	1.50E-04
18	GO:0009617: response to bacterium	1.86E-04
19	GO:0001676: long-chain fatty acid metabolic process	2.04E-04
20	GO:0006621: protein retention in ER lumen	2.76E-04
21	GO:0010600: regulation of auxin biosynthetic process	2.76E-04
22	GO:0031365: N-terminal protein amino acid modification	3.53E-04
23	GO:0048527: lateral root development	3.84E-04
24	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	6.07E-04
25	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	6.99E-04
26	GO:0030091: protein repair	6.99E-04
27	GO:0010120: camalexin biosynthetic process	7.94E-04
28	GO:0006997: nucleus organization	7.94E-04
29	GO:0010204: defense response signaling pathway, resistance gene-independent	7.94E-04
30	GO:0055114: oxidation-reduction process	8.85E-04
31	GO:0006098: pentose-phosphate shunt	8.92E-04
32	GO:0009638: phototropism	9.92E-04
33	GO:0019538: protein metabolic process	1.10E-03
34	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.10E-03
35	GO:1903507: negative regulation of nucleic acid-templated transcription	1.20E-03
36	GO:0002213: defense response to insect	1.31E-03
37	GO:0009785: blue light signaling pathway	1.43E-03
38	GO:0042343: indole glucosinolate metabolic process	1.67E-03
39	GO:0000162: tryptophan biosynthetic process	1.79E-03
40	GO:0080147: root hair cell development	1.92E-03
41	GO:0043622: cortical microtubule organization	2.05E-03
42	GO:0009695: jasmonic acid biosynthetic process	2.05E-03
43	GO:0098542: defense response to other organism	2.19E-03
44	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.32E-03
45	GO:0071456: cellular response to hypoxia	2.32E-03
46	GO:0006012: galactose metabolic process	2.46E-03
47	GO:0009625: response to insect	2.46E-03
48	GO:0008284: positive regulation of cell proliferation	2.75E-03
49	GO:0009723: response to ethylene	2.99E-03
50	GO:0006885: regulation of pH	3.05E-03
51	GO:0006520: cellular amino acid metabolic process	3.05E-03
52	GO:0006623: protein targeting to vacuole	3.36E-03
53	GO:0009851: auxin biosynthetic process	3.36E-03
54	GO:0006635: fatty acid beta-oxidation	3.51E-03
55	GO:0009630: gravitropism	3.68E-03
56	GO:0009627: systemic acquired resistance	4.87E-03
57	GO:0009753: response to jasmonic acid	5.04E-03
58	GO:0009813: flavonoid biosynthetic process	5.60E-03
59	GO:0009407: toxin catabolic process	5.79E-03
60	GO:0006952: defense response	6.08E-03
61	GO:0051707: response to other organism	7.60E-03
62	GO:0009636: response to toxic substance	8.24E-03
63	GO:0006812: cation transport	8.91E-03
64	GO:0009809: lignin biosynthetic process	9.36E-03
65	GO:0006813: potassium ion transport	9.36E-03
66	GO:0009626: plant-type hypersensitive response	1.10E-02
67	GO:0009620: response to fungus	1.13E-02
68	GO:0009742: brassinosteroid mediated signaling pathway	1.25E-02
69	GO:0009058: biosynthetic process	1.46E-02
70	GO:0009845: seed germination	1.49E-02
71	GO:0040008: regulation of growth	1.71E-02
72	GO:0006979: response to oxidative stress	1.71E-02
73	GO:0007166: cell surface receptor signaling pathway	1.94E-02
74	GO:0008380: RNA splicing	2.00E-02
75	GO:0006970: response to osmotic stress	2.54E-02
76	GO:0048366: leaf development	2.71E-02
77	GO:0080167: response to karrikin	2.81E-02
78	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.88E-02
79	GO:0046777: protein autophosphorylation	2.95E-02
80	GO:0044550: secondary metabolite biosynthetic process	2.98E-02
81	GO:0006629: lipid metabolic process	3.71E-02
82	GO:0006468: protein phosphorylation	3.75E-02
83	GO:0006397: mRNA processing	3.82E-02
84	GO:0008152: metabolic process	3.97E-02
85	GO:0009734: auxin-activated signaling pathway	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0000386: second spliceosomal transesterification activity	3.12E-05
3	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	1.37E-04
4	GO:0004049: anthranilate synthase activity	1.37E-04
5	GO:0010178: IAA-amino acid conjugate hydrolase activity	2.04E-04
6	GO:0046923: ER retention sequence binding	2.76E-04
7	GO:0003995: acyl-CoA dehydrogenase activity	2.76E-04
8	GO:0009916: alternative oxidase activity	2.76E-04
9	GO:0003997: acyl-CoA oxidase activity	3.53E-04
10	GO:0042803: protein homodimerization activity	4.71E-04
11	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	5.20E-04
12	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	5.20E-04
13	GO:0004656: procollagen-proline 4-dioxygenase activity	5.20E-04
14	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	5.20E-04
15	GO:0008235: metalloexopeptidase activity	6.07E-04
16	GO:0016621: cinnamoyl-CoA reductase activity	6.07E-04
17	GO:0004034: aldose 1-epimerase activity	6.99E-04
18	GO:0004177: aminopeptidase activity	1.20E-03
19	GO:0001046: core promoter sequence-specific DNA binding	1.92E-03
20	GO:0003714: transcription corepressor activity	1.92E-03
21	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.61E-03
22	GO:0003727: single-stranded RNA binding	2.61E-03
23	GO:0005451: monovalent cation:proton antiporter activity	2.90E-03
24	GO:0050660: flavin adenine dinucleotide binding	2.99E-03
25	GO:0016853: isomerase activity	3.20E-03
26	GO:0015299: solute:proton antiporter activity	3.20E-03
27	GO:0004497: monooxygenase activity	3.20E-03
28	GO:0004872: receptor activity	3.36E-03
29	GO:0015385: sodium:proton antiporter activity	3.84E-03
30	GO:0016791: phosphatase activity	4.00E-03
31	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.12E-03
32	GO:0008483: transaminase activity	4.17E-03
33	GO:0008237: metallopeptidase activity	4.17E-03
34	GO:0046872: metal ion binding	4.26E-03
35	GO:0051213: dioxygenase activity	4.52E-03
36	GO:0004806: triglyceride lipase activity	5.05E-03
37	GO:0004721: phosphoprotein phosphatase activity	5.05E-03
38	GO:0030145: manganese ion binding	5.99E-03
39	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	6.38E-03
40	GO:0050661: NADP binding	6.98E-03
41	GO:0004364: glutathione transferase activity	7.39E-03
42	GO:0005198: structural molecule activity	8.24E-03
43	GO:0016298: lipase activity	9.59E-03
44	GO:0016301: kinase activity	9.79E-03
45	GO:0030246: carbohydrate binding	1.12E-02
46	GO:0019825: oxygen binding	1.19E-02
47	GO:0016746: transferase activity, transferring acyl groups	1.22E-02
48	GO:0030170: pyridoxal phosphate binding	1.51E-02
49	GO:0005506: iron ion binding	1.66E-02
50	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.68E-02
51	GO:0004674: protein serine/threonine kinase activity	2.14E-02
52	GO:0046982: protein heterodimerization activity	2.38E-02
53	GO:0004672: protein kinase activity	2.49E-02
54	GO:0020037: heme binding	2.67E-02
55	GO:0004871: signal transducer activity	3.30E-02
56	GO:0004722: protein serine/threonine phosphatase activity	3.41E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005950: anthranilate synthase complex	7.88E-05
3	GO:0070469: respiratory chain	2.05E-03
4	GO:0005770: late endosome	3.05E-03
5	GO:0009504: cell plate	3.36E-03
6	GO:0031965: nuclear membrane	3.36E-03
7	GO:0005788: endoplasmic reticulum lumen	4.69E-03
8	GO:0005777: peroxisome	9.56E-03
9	GO:0005635: nuclear envelope	9.82E-03
10	GO:0005681: spliceosomal complex	1.05E-02
11	GO:0005802: trans-Golgi network	1.34E-02
12	GO:0005768: endosome	1.52E-02
13	GO:0005789: endoplasmic reticulum membrane	2.59E-02
14	GO:0009570: chloroplast stroma	3.06E-02
15	GO:0005794: Golgi apparatus	3.52E-02
16	GO:0005743: mitochondrial inner membrane	3.52E-02
17	GO:0043231: intracellular membrane-bounded organelle	3.97E-02