co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G34160

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045014: negative regulation of transcription by glucose	0.00E+00
2	GO:0000819: sister chromatid segregation	0.00E+00
3	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
4	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
5	GO:0080127: fruit septum development	0.00E+00
6	GO:0006907: pinocytosis	0.00E+00
7	GO:0051513: regulation of monopolar cell growth	6.40E-05
8	GO:0048497: maintenance of floral organ identity	1.73E-04
9	GO:0010726: positive regulation of hydrogen peroxide metabolic process	4.40E-04
10	GO:0006438: valyl-tRNA aminoacylation	4.40E-04
11	GO:0032958: inositol phosphate biosynthetic process	4.40E-04
12	GO:0043087: regulation of GTPase activity	4.40E-04
13	GO:0051013: microtubule severing	4.40E-04
14	GO:0034757: negative regulation of iron ion transport	4.40E-04
15	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.35E-04
16	GO:0007186: G-protein coupled receptor signaling pathway	6.48E-04
17	GO:0009736: cytokinin-activated signaling pathway	8.83E-04
18	GO:0061062: regulation of nematode larval development	9.50E-04
19	GO:0010271: regulation of chlorophyll catabolic process	9.50E-04
20	GO:0001736: establishment of planar polarity	9.50E-04
21	GO:0009786: regulation of asymmetric cell division	9.50E-04
22	GO:0010024: phytochromobilin biosynthetic process	9.50E-04
23	GO:0043039: tRNA aminoacylation	9.50E-04
24	GO:0048829: root cap development	1.06E-03
25	GO:0045037: protein import into chloroplast stroma	1.40E-03
26	GO:0010226: response to lithium ion	1.55E-03
27	GO:0080117: secondary growth	1.55E-03
28	GO:0006065: UDP-glucuronate biosynthetic process	1.55E-03
29	GO:0010311: lateral root formation	1.89E-03
30	GO:0000160: phosphorelay signal transduction system	1.89E-03
31	GO:0009825: multidimensional cell growth	2.02E-03
32	GO:0051639: actin filament network formation	2.24E-03
33	GO:0034059: response to anoxia	2.24E-03
34	GO:0007276: gamete generation	2.24E-03
35	GO:0006424: glutamyl-tRNA aminoacylation	2.24E-03
36	GO:0010321: regulation of vegetative phase change	2.24E-03
37	GO:0010371: regulation of gibberellin biosynthetic process	2.24E-03
38	GO:0006020: inositol metabolic process	2.24E-03
39	GO:0009734: auxin-activated signaling pathway	2.54E-03
40	GO:0030001: metal ion transport	2.84E-03
41	GO:0042991: transcription factor import into nucleus	3.01E-03
42	GO:0006021: inositol biosynthetic process	3.01E-03
43	GO:0009956: radial pattern formation	3.01E-03
44	GO:0051764: actin crosslink formation	3.01E-03
45	GO:0009926: auxin polar transport	3.33E-03
46	GO:0006351: transcription, DNA-templated	3.77E-03
47	GO:0009696: salicylic acid metabolic process	3.85E-03
48	GO:0010091: trichome branching	3.93E-03
49	GO:0010358: leaf shaping	4.77E-03
50	GO:0016554: cytidine to uridine editing	4.77E-03
51	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	4.77E-03
52	GO:0009913: epidermal cell differentiation	4.77E-03
53	GO:1902456: regulation of stomatal opening	4.77E-03
54	GO:0048831: regulation of shoot system development	4.77E-03
55	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	4.77E-03
56	GO:0003006: developmental process involved in reproduction	4.77E-03
57	GO:0010942: positive regulation of cell death	4.77E-03
58	GO:0009958: positive gravitropism	4.97E-03
59	GO:0048825: cotyledon development	5.73E-03
60	GO:0048509: regulation of meristem development	5.75E-03
61	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	5.75E-03
62	GO:0010019: chloroplast-nucleus signaling pathway	5.75E-03
63	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	5.75E-03
64	GO:0006468: protein phosphorylation	6.01E-03
65	GO:0071554: cell wall organization or biogenesis	6.14E-03
66	GO:1900056: negative regulation of leaf senescence	6.80E-03
67	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	6.80E-03
68	GO:0000712: resolution of meiotic recombination intermediates	6.80E-03
69	GO:0009610: response to symbiotic fungus	6.80E-03
70	GO:0009733: response to auxin	7.21E-03
71	GO:0046620: regulation of organ growth	7.91E-03
72	GO:0010492: maintenance of shoot apical meristem identity	7.91E-03
73	GO:0000105: histidine biosynthetic process	7.91E-03
74	GO:0048574: long-day photoperiodism, flowering	9.09E-03
75	GO:0048507: meristem development	1.03E-02
76	GO:0046916: cellular transition metal ion homeostasis	1.03E-02
77	GO:0000373: Group II intron splicing	1.03E-02
78	GO:0048589: developmental growth	1.03E-02
79	GO:0009056: catabolic process	1.03E-02
80	GO:1900865: chloroplast RNA modification	1.16E-02
81	GO:0009817: defense response to fungus, incompatible interaction	1.17E-02
82	GO:0006811: ion transport	1.29E-02
83	GO:0006782: protoporphyrinogen IX biosynthetic process	1.30E-02
84	GO:0009641: shade avoidance	1.30E-02
85	GO:0006949: syncytium formation	1.30E-02
86	GO:0006259: DNA metabolic process	1.30E-02
87	GO:0008285: negative regulation of cell proliferation	1.44E-02
88	GO:0006265: DNA topological change	1.44E-02
89	GO:0009750: response to fructose	1.44E-02
90	GO:0048765: root hair cell differentiation	1.44E-02
91	GO:0006790: sulfur compound metabolic process	1.58E-02
92	GO:0006312: mitotic recombination	1.58E-02
93	GO:0005983: starch catabolic process	1.58E-02
94	GO:0010582: floral meristem determinacy	1.58E-02
95	GO:0010152: pollen maturation	1.58E-02
96	GO:0071555: cell wall organization	1.59E-02
97	GO:0010102: lateral root morphogenesis	1.73E-02
98	GO:0030048: actin filament-based movement	1.73E-02
99	GO:0048467: gynoecium development	1.89E-02
100	GO:0009933: meristem structural organization	1.89E-02
101	GO:0010207: photosystem II assembly	1.89E-02
102	GO:0009887: animal organ morphogenesis	1.89E-02
103	GO:0010540: basipetal auxin transport	1.89E-02
104	GO:0006302: double-strand break repair	1.89E-02
105	GO:0051707: response to other organism	1.91E-02
106	GO:0046854: phosphatidylinositol phosphorylation	2.05E-02
107	GO:0006636: unsaturated fatty acid biosynthetic process	2.21E-02
108	GO:0006863: purine nucleobase transport	2.21E-02
109	GO:0051017: actin filament bundle assembly	2.38E-02
110	GO:0009664: plant-type cell wall organization	2.41E-02
111	GO:0019953: sexual reproduction	2.55E-02
112	GO:0006418: tRNA aminoacylation for protein translation	2.55E-02
113	GO:0006874: cellular calcium ion homeostasis	2.55E-02
114	GO:0043622: cortical microtubule organization	2.55E-02
115	GO:0009658: chloroplast organization	2.67E-02
116	GO:0051321: meiotic cell cycle	2.73E-02
117	GO:0003333: amino acid transmembrane transport	2.73E-02
118	GO:0010431: seed maturation	2.73E-02
119	GO:0009909: regulation of flower development	2.86E-02
120	GO:0007005: mitochondrion organization	2.91E-02
121	GO:0071215: cellular response to abscisic acid stimulus	3.10E-02
122	GO:0010082: regulation of root meristem growth	3.10E-02
123	GO:0048366: leaf development	3.27E-02
124	GO:0048443: stamen development	3.29E-02
125	GO:0006284: base-excision repair	3.29E-02
126	GO:0042127: regulation of cell proliferation	3.29E-02
127	GO:0070417: cellular response to cold	3.48E-02
128	GO:0009624: response to nematode	3.67E-02
129	GO:0000226: microtubule cytoskeleton organization	3.68E-02
130	GO:0000271: polysaccharide biosynthetic process	3.68E-02
131	GO:0010087: phloem or xylem histogenesis	3.68E-02
132	GO:0010118: stomatal movement	3.68E-02
133	GO:0010268: brassinosteroid homeostasis	3.88E-02
134	GO:0045489: pectin biosynthetic process	3.88E-02
135	GO:0010305: leaf vascular tissue pattern formation	3.88E-02
136	GO:0010182: sugar mediated signaling pathway	3.88E-02
137	GO:0009741: response to brassinosteroid	3.88E-02
138	GO:0051726: regulation of cell cycle	3.89E-02
139	GO:0006355: regulation of transcription, DNA-templated	3.97E-02
140	GO:0007018: microtubule-based movement	4.09E-02
141	GO:0007059: chromosome segregation	4.09E-02
142	GO:0009749: response to glucose	4.30E-02
143	GO:0045892: negative regulation of transcription, DNA-templated	4.43E-02
144	GO:0002229: defense response to oomycetes	4.51E-02
145	GO:0016132: brassinosteroid biosynthetic process	4.51E-02
146	GO:0010583: response to cyclopentenone	4.73E-02
147	GO:0032502: developmental process	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity	0.00E+00
2	GO:0004401: histidinol-phosphatase activity	0.00E+00
3	GO:0071633: dihydroceramidase activity	0.00E+00
4	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
5	GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	0.00E+00
6	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
7	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
8	GO:0010011: auxin binding	1.12E-04
9	GO:0005096: GTPase activator activity	2.76E-04
10	GO:0000828: inositol hexakisphosphate kinase activity	4.40E-04
11	GO:0004818: glutamate-tRNA ligase activity	4.40E-04
12	GO:0008568: microtubule-severing ATPase activity	4.40E-04
13	GO:0004832: valine-tRNA ligase activity	4.40E-04
14	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	4.40E-04
15	GO:0010347: L-galactose-1-phosphate phosphatase activity	4.40E-04
16	GO:0010012: steroid 22-alpha hydroxylase activity	4.40E-04
17	GO:0000829: inositol heptakisphosphate kinase activity	4.40E-04
18	GO:0052832: inositol monophosphate 3-phosphatase activity	9.50E-04
19	GO:0004109: coproporphyrinogen oxidase activity	9.50E-04
20	GO:0008805: carbon-monoxide oxygenase activity	9.50E-04
21	GO:0008934: inositol monophosphate 1-phosphatase activity	9.50E-04
22	GO:0052833: inositol monophosphate 4-phosphatase activity	9.50E-04
23	GO:0009884: cytokinin receptor activity	9.50E-04
24	GO:0019156: isoamylase activity	9.50E-04
25	GO:0010296: prenylcysteine methylesterase activity	9.50E-04
26	GO:0005515: protein binding	1.29E-03
27	GO:0003913: DNA photolyase activity	1.55E-03
28	GO:0005034: osmosensor activity	1.55E-03
29	GO:0003979: UDP-glucose 6-dehydrogenase activity	1.55E-03
30	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	2.24E-03
31	GO:0003916: DNA topoisomerase activity	2.24E-03
32	GO:0080031: methyl salicylate esterase activity	2.24E-03
33	GO:0001872: (1->3)-beta-D-glucan binding	2.24E-03
34	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	3.01E-03
35	GO:0010328: auxin influx transmembrane transporter activity	3.01E-03
36	GO:0019199: transmembrane receptor protein kinase activity	3.01E-03
37	GO:0004930: G-protein coupled receptor activity	3.01E-03
38	GO:0004674: protein serine/threonine kinase activity	3.27E-03
39	GO:0042803: protein homodimerization activity	3.58E-03
40	GO:0030570: pectate lyase activity	3.61E-03
41	GO:0005471: ATP:ADP antiporter activity	3.85E-03
42	GO:0008725: DNA-3-methyladenine glycosylase activity	3.85E-03
43	GO:0004709: MAP kinase kinase kinase activity	4.77E-03
44	GO:0004556: alpha-amylase activity	4.77E-03
45	GO:0080030: methyl indole-3-acetate esterase activity	4.77E-03
46	GO:0009055: electron carrier activity	5.38E-03
47	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	5.75E-03
48	GO:0016832: aldehyde-lyase activity	5.75E-03
49	GO:0019900: kinase binding	5.75E-03
50	GO:0003700: transcription factor activity, sequence-specific DNA binding	5.77E-03
51	GO:0009881: photoreceptor activity	6.80E-03
52	GO:0000156: phosphorelay response regulator activity	7.00E-03
53	GO:0051015: actin filament binding	7.00E-03
54	GO:0003779: actin binding	7.36E-03
55	GO:0016413: O-acetyltransferase activity	8.40E-03
56	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	9.09E-03
57	GO:0046914: transition metal ion binding	9.09E-03
58	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	9.09E-03
59	GO:0016301: kinase activity	9.77E-03
60	GO:0052689: carboxylic ester hydrolase activity	1.09E-02
61	GO:0004672: protein kinase activity	1.28E-02
62	GO:0004673: protein histidine kinase activity	1.30E-02
63	GO:0004722: protein serine/threonine phosphatase activity	1.42E-02
64	GO:0000049: tRNA binding	1.58E-02
65	GO:0003725: double-stranded RNA binding	1.73E-02
66	GO:0000155: phosphorelay sensor kinase activity	1.73E-02
67	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.89E-02
68	GO:0003774: motor activity	1.89E-02
69	GO:0005217: intracellular ligand-gated ion channel activity	2.05E-02
70	GO:0003712: transcription cofactor activity	2.05E-02
71	GO:0004970: ionotropic glutamate receptor activity	2.05E-02
72	GO:0042802: identical protein binding	2.08E-02
73	GO:0043424: protein histidine kinase binding	2.55E-02
74	GO:0005345: purine nucleobase transmembrane transporter activity	2.55E-02
75	GO:0016298: lipase activity	2.67E-02
76	GO:0004707: MAP kinase activity	2.73E-02
77	GO:0008094: DNA-dependent ATPase activity	2.73E-02
78	GO:0016788: hydrolase activity, acting on ester bonds	2.73E-02
79	GO:0008408: 3'-5' exonuclease activity	2.73E-02
80	GO:0046872: metal ion binding	2.74E-02
81	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.91E-02
82	GO:0003677: DNA binding	3.14E-02
83	GO:0004812: aminoacyl-tRNA ligase activity	3.48E-02
84	GO:0015035: protein disulfide oxidoreductase activity	3.78E-02
85	GO:0005524: ATP binding	3.80E-02
86	GO:0043565: sequence-specific DNA binding	3.81E-02
87	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	3.88E-02
88	GO:0001085: RNA polymerase II transcription factor binding	3.88E-02
89	GO:0016853: isomerase activity	4.09E-02
90	GO:0019901: protein kinase binding	4.30E-02
91	GO:0016762: xyloglucan:xyloglucosyl transferase activity	4.51E-02
92	GO:0004871: signal transducer activity	4.60E-02
93	GO:0004518: nuclease activity	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0000408: EKC/KEOPS complex	0.00E+00
2	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
3	GO:0009986: cell surface	4.25E-04
4	GO:0000791: euchromatin	4.40E-04
5	GO:0009569: chloroplast starch grain	9.50E-04
6	GO:0030870: Mre11 complex	9.50E-04
7	GO:0005884: actin filament	1.23E-03
8	GO:0030139: endocytic vesicle	1.55E-03
9	GO:0032585: multivesicular body membrane	2.24E-03
10	GO:0032432: actin filament bundle	2.24E-03
11	GO:0009531: secondary cell wall	2.24E-03
12	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	3.01E-03
13	GO:0000795: synaptonemal complex	3.85E-03
14	GO:0000793: condensed chromosome	4.77E-03
15	GO:0046658: anchored component of plasma membrane	5.34E-03
16	GO:0000794: condensed nuclear chromosome	6.80E-03
17	GO:0031225: anchored component of membrane	9.59E-03
18	GO:0016459: myosin complex	1.30E-02
19	GO:0009574: preprophase band	1.73E-02
20	GO:0005578: proteinaceous extracellular matrix	1.73E-02
21	GO:0030095: chloroplast photosystem II	1.89E-02
22	GO:0005886: plasma membrane	2.20E-02
23	GO:0005875: microtubule associated complex	2.21E-02
24	GO:0009654: photosystem II oxygen evolving complex	2.55E-02
25	GO:0015629: actin cytoskeleton	3.10E-02
26	GO:0005874: microtubule	3.34E-02
27	GO:0005871: kinesin complex	3.48E-02
28	GO:0009706: chloroplast inner membrane	3.67E-02
29	GO:0019898: extrinsic component of membrane	4.30E-02
30	GO:0005623: cell	4.71E-02
31	GO:0000785: chromatin	4.73E-02