GO Enrichment Analysis of Co-expressed Genes with
AT4G34020
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA | 0.00E+00 |
| 2 | GO:0045176: apical protein localization | 0.00E+00 |
| 3 | GO:1905615: positive regulation of developmental vegetative growth | 0.00E+00 |
| 4 | GO:0009451: RNA modification | 1.27E-04 |
| 5 | GO:0048255: mRNA stabilization | 2.32E-04 |
| 6 | GO:0009800: cinnamic acid biosynthetic process | 5.54E-04 |
| 7 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 5.54E-04 |
| 8 | GO:1901371: regulation of leaf morphogenesis | 1.14E-03 |
| 9 | GO:0006559: L-phenylalanine catabolic process | 1.14E-03 |
| 10 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 1.14E-03 |
| 11 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.14E-03 |
| 12 | GO:0048827: phyllome development | 1.14E-03 |
| 13 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.36E-03 |
| 14 | GO:1901001: negative regulation of response to salt stress | 1.36E-03 |
| 15 | GO:0006401: RNA catabolic process | 1.59E-03 |
| 16 | GO:0009610: response to symbiotic fungus | 1.59E-03 |
| 17 | GO:0006353: DNA-templated transcription, termination | 1.84E-03 |
| 18 | GO:0030091: protein repair | 1.84E-03 |
| 19 | GO:0034968: histone lysine methylation | 1.84E-03 |
| 20 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.84E-03 |
| 21 | GO:0010052: guard cell differentiation | 2.10E-03 |
| 22 | GO:0016571: histone methylation | 2.65E-03 |
| 23 | GO:0008202: steroid metabolic process | 2.65E-03 |
| 24 | GO:0010192: mucilage biosynthetic process | 2.95E-03 |
| 25 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.25E-03 |
| 26 | GO:0016485: protein processing | 3.25E-03 |
| 27 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.57E-03 |
| 28 | GO:0010229: inflorescence development | 3.89E-03 |
| 29 | GO:0010540: basipetal auxin transport | 4.22E-03 |
| 30 | GO:0009793: embryo development ending in seed dormancy | 4.48E-03 |
| 31 | GO:0080188: RNA-directed DNA methylation | 4.57E-03 |
| 32 | GO:0006863: purine nucleobase transport | 4.92E-03 |
| 33 | GO:0009833: plant-type primary cell wall biogenesis | 4.92E-03 |
| 34 | GO:0006306: DNA methylation | 6.03E-03 |
| 35 | GO:0016226: iron-sulfur cluster assembly | 6.42E-03 |
| 36 | GO:0019748: secondary metabolic process | 6.42E-03 |
| 37 | GO:0009693: ethylene biosynthetic process | 6.82E-03 |
| 38 | GO:0009416: response to light stimulus | 7.86E-03 |
| 39 | GO:0048653: anther development | 8.07E-03 |
| 40 | GO:0048868: pollen tube development | 8.50E-03 |
| 41 | GO:0048825: cotyledon development | 9.39E-03 |
| 42 | GO:0008654: phospholipid biosynthetic process | 9.39E-03 |
| 43 | GO:0002229: defense response to oomycetes | 9.85E-03 |
| 44 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 9.85E-03 |
| 45 | GO:0010583: response to cyclopentenone | 1.03E-02 |
| 46 | GO:0031047: gene silencing by RNA | 1.03E-02 |
| 47 | GO:0009911: positive regulation of flower development | 1.28E-02 |
| 48 | GO:0030244: cellulose biosynthetic process | 1.54E-02 |
| 49 | GO:0008219: cell death | 1.54E-02 |
| 50 | GO:0009832: plant-type cell wall biogenesis | 1.60E-02 |
| 51 | GO:0000160: phosphorelay signal transduction system | 1.60E-02 |
| 52 | GO:0006979: response to oxidative stress | 1.94E-02 |
| 53 | GO:0008152: metabolic process | 2.33E-02 |
| 54 | GO:0006364: rRNA processing | 2.70E-02 |
| 55 | GO:0009736: cytokinin-activated signaling pathway | 2.70E-02 |
| 56 | GO:0009553: embryo sac development | 3.39E-02 |
| 57 | GO:0006468: protein phosphorylation | 3.54E-02 |
| 58 | GO:0051726: regulation of cell cycle | 3.62E-02 |
| 59 | GO:0009738: abscisic acid-activated signaling pathway | 3.63E-02 |
| 60 | GO:0006355: regulation of transcription, DNA-templated | 4.27E-02 |
| 61 | GO:0042744: hydrogen peroxide catabolic process | 4.46E-02 |
| 62 | GO:0009790: embryo development | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 2 | GO:0080062: cytokinin 9-beta-glucosyltransferase activity | 9.88E-05 |
| 3 | GO:0017091: AU-rich element binding | 9.88E-05 |
| 4 | GO:0047807: cytokinin 7-beta-glucosyltransferase activity | 9.88E-05 |
| 5 | GO:0008836: diaminopimelate decarboxylase activity | 9.88E-05 |
| 6 | GO:0008327: methyl-CpG binding | 1.48E-04 |
| 7 | GO:0004047: aminomethyltransferase activity | 2.32E-04 |
| 8 | GO:0010429: methyl-CpNpN binding | 3.86E-04 |
| 9 | GO:0045548: phenylalanine ammonia-lyase activity | 3.86E-04 |
| 10 | GO:0010428: methyl-CpNpG binding | 3.86E-04 |
| 11 | GO:0003676: nucleic acid binding | 1.09E-03 |
| 12 | GO:0004462: lactoylglutathione lyase activity | 1.14E-03 |
| 13 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.14E-03 |
| 14 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.36E-03 |
| 15 | GO:0003723: RNA binding | 1.44E-03 |
| 16 | GO:0019899: enzyme binding | 1.59E-03 |
| 17 | GO:0008142: oxysterol binding | 2.10E-03 |
| 18 | GO:0015020: glucuronosyltransferase activity | 2.95E-03 |
| 19 | GO:0004871: signal transducer activity | 3.09E-03 |
| 20 | GO:0009982: pseudouridine synthase activity | 3.89E-03 |
| 21 | GO:0000175: 3'-5'-exoribonuclease activity | 3.89E-03 |
| 22 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.94E-03 |
| 23 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.94E-03 |
| 24 | GO:0004519: endonuclease activity | 4.23E-03 |
| 25 | GO:0005345: purine nucleobase transmembrane transporter activity | 5.65E-03 |
| 26 | GO:0004540: ribonuclease activity | 6.03E-03 |
| 27 | GO:0016760: cellulose synthase (UDP-forming) activity | 6.82E-03 |
| 28 | GO:0018024: histone-lysine N-methyltransferase activity | 7.64E-03 |
| 29 | GO:0008194: UDP-glycosyltransferase activity | 8.31E-03 |
| 30 | GO:0019901: protein kinase binding | 9.39E-03 |
| 31 | GO:0000156: phosphorelay response regulator activity | 1.08E-02 |
| 32 | GO:0016759: cellulose synthase activity | 1.13E-02 |
| 33 | GO:0008237: metallopeptidase activity | 1.18E-02 |
| 34 | GO:0004806: triglyceride lipase activity | 1.43E-02 |
| 35 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.65E-02 |
| 36 | GO:0004222: metalloendopeptidase activity | 1.65E-02 |
| 37 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.94E-02 |
| 38 | GO:0042393: histone binding | 2.00E-02 |
| 39 | GO:0004364: glutathione transferase activity | 2.12E-02 |
| 40 | GO:0004185: serine-type carboxypeptidase activity | 2.18E-02 |
| 41 | GO:0043621: protein self-association | 2.31E-02 |
| 42 | GO:0035091: phosphatidylinositol binding | 2.31E-02 |
| 43 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.11E-02 |
| 44 | GO:0022857: transmembrane transporter activity | 3.32E-02 |
| 45 | GO:0004386: helicase activity | 3.69E-02 |
| 46 | GO:0016758: transferase activity, transferring hexosyl groups | 3.99E-02 |
| 47 | GO:0019843: rRNA binding | 4.07E-02 |
| 48 | GO:0003677: DNA binding | 4.16E-02 |
| 49 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010370: perinucleolar chromocenter | 9.88E-05 |
| 2 | GO:0000178: exosome (RNase complex) | 9.32E-04 |
| 3 | GO:0005720: nuclear heterochromatin | 2.37E-03 |
| 4 | GO:0016602: CCAAT-binding factor complex | 3.89E-03 |
| 5 | GO:0043231: intracellular membrane-bounded organelle | 4.30E-03 |
| 6 | GO:0000419: DNA-directed RNA polymerase V complex | 4.92E-03 |
| 7 | GO:0000775: chromosome, centromeric region | 6.42E-03 |
| 8 | GO:0005770: late endosome | 8.50E-03 |
| 9 | GO:0010319: stromule | 1.18E-02 |
| 10 | GO:0000932: P-body | 1.28E-02 |
| 11 | GO:0009707: chloroplast outer membrane | 1.54E-02 |
| 12 | GO:0031977: thylakoid lumen | 2.06E-02 |
| 13 | GO:0005759: mitochondrial matrix | 4.78E-02 |