co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G33760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006849: plasma membrane pyruvate transport	0.00E+00
2	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
3	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
4	GO:0006353: DNA-templated transcription, termination	3.42E-05
5	GO:0015995: chlorophyll biosynthetic process	5.10E-05
6	GO:0007093: mitotic cell cycle checkpoint	7.23E-05
7	GO:0000476: maturation of 4.5S rRNA	7.23E-05
8	GO:0000967: rRNA 5'-end processing	7.23E-05
9	GO:0043007: maintenance of rDNA	7.23E-05
10	GO:0034337: RNA folding	7.23E-05
11	GO:0005991: trehalose metabolic process	7.23E-05
12	GO:0005980: glycogen catabolic process	7.23E-05
13	GO:0051304: chromosome separation	1.74E-04
14	GO:0071452: cellular response to singlet oxygen	1.74E-04
15	GO:0010270: photosystem II oxygen evolving complex assembly	1.74E-04
16	GO:0034470: ncRNA processing	1.74E-04
17	GO:0009405: pathogenesis	2.93E-04
18	GO:0046739: transport of virus in multicellular host	4.23E-04
19	GO:0051085: chaperone mediated protein folding requiring cofactor	4.23E-04
20	GO:0010601: positive regulation of auxin biosynthetic process	4.23E-04
21	GO:0019252: starch biosynthetic process	4.81E-04
22	GO:0007094: mitotic spindle assembly checkpoint	7.14E-04
23	GO:0015031: protein transport	7.56E-04
24	GO:0042793: transcription from plastid promoter	8.73E-04
25	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	8.73E-04
26	GO:0006828: manganese ion transport	8.73E-04
27	GO:1901259: chloroplast rRNA processing	1.04E-03
28	GO:0042026: protein refolding	1.04E-03
29	GO:0048437: floral organ development	1.21E-03
30	GO:0042255: ribosome assembly	1.40E-03
31	GO:0070413: trehalose metabolism in response to stress	1.40E-03
32	GO:0005978: glycogen biosynthetic process	1.40E-03
33	GO:0010497: plasmodesmata-mediated intercellular transport	1.59E-03
34	GO:0015979: photosynthesis	1.62E-03
35	GO:0006783: heme biosynthetic process	1.80E-03
36	GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	2.01E-03
37	GO:0045036: protein targeting to chloroplast	2.23E-03
38	GO:0006782: protoporphyrinogen IX biosynthetic process	2.23E-03
39	GO:0006816: calcium ion transport	2.46E-03
40	GO:0005983: starch catabolic process	2.70E-03
41	GO:0009266: response to temperature stimulus	3.19E-03
42	GO:0051017: actin filament bundle assembly	3.98E-03
43	GO:0005992: trehalose biosynthetic process	3.98E-03
44	GO:0009790: embryo development	4.16E-03
45	GO:0009768: photosynthesis, light harvesting in photosystem I	4.26E-03
46	GO:0006418: tRNA aminoacylation for protein translation	4.26E-03
47	GO:0051321: meiotic cell cycle	4.54E-03
48	GO:0016114: terpenoid biosynthetic process	4.54E-03
49	GO:0016226: iron-sulfur cluster assembly	4.83E-03
50	GO:0007005: mitochondrion organization	4.83E-03
51	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	5.13E-03
52	GO:0010182: sugar mediated signaling pathway	6.38E-03
53	GO:0006457: protein folding	6.43E-03
54	GO:0006814: sodium ion transport	6.70E-03
55	GO:0007059: chromosome segregation	6.70E-03
56	GO:0009556: microsporogenesis	7.04E-03
57	GO:0009658: chloroplast organization	7.59E-03
58	GO:0009828: plant-type cell wall loosening	8.43E-03
59	GO:0010027: thylakoid membrane organization	9.54E-03
60	GO:0009627: systemic acquired resistance	1.03E-02
61	GO:0006906: vesicle fusion	1.03E-02
62	GO:0048481: plant ovule development	1.15E-02
63	GO:0008219: cell death	1.15E-02
64	GO:0009832: plant-type cell wall biogenesis	1.19E-02
65	GO:0006887: exocytosis	1.54E-02
66	GO:0006897: endocytosis	1.54E-02
67	GO:0009664: plant-type cell wall organization	1.91E-02
68	GO:0042538: hyperosmotic salinity response	1.91E-02
69	GO:0006364: rRNA processing	2.01E-02
70	GO:0009416: response to light stimulus	2.48E-02
71	GO:0042545: cell wall modification	2.53E-02
72	GO:0009553: embryo sac development	2.53E-02
73	GO:0035556: intracellular signal transduction	2.62E-02
74	GO:0006396: RNA processing	2.64E-02
75	GO:0051301: cell division	2.70E-02
76	GO:0009793: embryo development ending in seed dormancy	3.26E-02
77	GO:0006633: fatty acid biosynthetic process	3.56E-02
78	GO:0045490: pectin catabolic process	3.81E-02
79	GO:0008380: RNA splicing	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0051060: pullulanase activity	0.00E+00
2	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
3	GO:0090711: FMN hydrolase activity	0.00E+00
4	GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	0.00E+00
5	GO:0010303: limit dextrinase activity	0.00E+00
6	GO:0004853: uroporphyrinogen decarboxylase activity	7.23E-05
7	GO:0004856: xylulokinase activity	7.23E-05
8	GO:0004645: phosphorylase activity	7.23E-05
9	GO:0008184: glycogen phosphorylase activity	7.23E-05
10	GO:0016630: protochlorophyllide reductase activity	1.74E-04
11	GO:0050833: pyruvate transmembrane transporter activity	2.93E-04
12	GO:0090729: toxin activity	2.93E-04
13	GO:0002161: aminoacyl-tRNA editing activity	2.93E-04
14	GO:0016851: magnesium chelatase activity	4.23E-04
15	GO:0008508: bile acid:sodium symporter activity	4.23E-04
16	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	4.23E-04
17	GO:0008878: glucose-1-phosphate adenylyltransferase activity	5.65E-04
18	GO:0003959: NADPH dehydrogenase activity	7.14E-04
19	GO:0016773: phosphotransferase activity, alcohol group as acceptor	7.14E-04
20	GO:0004556: alpha-amylase activity	8.73E-04
21	GO:0004629: phospholipase C activity	8.73E-04
22	GO:0004435: phosphatidylinositol phospholipase C activity	1.04E-03
23	GO:0004525: ribonuclease III activity	1.40E-03
24	GO:0005525: GTP binding	1.76E-03
25	GO:0005384: manganese ion transmembrane transporter activity	2.01E-03
26	GO:0008327: methyl-CpG binding	2.46E-03
27	GO:0044183: protein binding involved in protein folding	2.46E-03
28	GO:0047372: acylglycerol lipase activity	2.46E-03
29	GO:0000049: tRNA binding	2.70E-03
30	GO:0015095: magnesium ion transmembrane transporter activity	2.94E-03
31	GO:0019843: rRNA binding	3.57E-03
32	GO:0031409: pigment binding	3.71E-03
33	GO:0051536: iron-sulfur cluster binding	3.98E-03
34	GO:0003727: single-stranded RNA binding	5.43E-03
35	GO:0004812: aminoacyl-tRNA ligase activity	5.74E-03
36	GO:0005102: receptor binding	5.74E-03
37	GO:0051015: actin filament binding	8.07E-03
38	GO:0016791: phosphatase activity	8.43E-03
39	GO:0008237: metallopeptidase activity	8.79E-03
40	GO:0016168: chlorophyll binding	9.92E-03
41	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.15E-02
42	GO:0004222: metalloendopeptidase activity	1.23E-02
43	GO:0003924: GTPase activity	1.39E-02
44	GO:0003993: acid phosphatase activity	1.40E-02
45	GO:0000149: SNARE binding	1.45E-02
46	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.45E-02
47	GO:0005484: SNAP receptor activity	1.63E-02
48	GO:0043621: protein self-association	1.72E-02
49	GO:0003723: RNA binding	1.78E-02
50	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.81E-02
51	GO:0003690: double-stranded DNA binding	2.06E-02
52	GO:0045330: aspartyl esterase activity	2.16E-02
53	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.31E-02
54	GO:0030599: pectinesterase activity	2.47E-02
55	GO:0051082: unfolded protein binding	2.58E-02
56	GO:0016787: hydrolase activity	2.96E-02
57	GO:0030170: pyridoxal phosphate binding	3.26E-02
58	GO:0042802: identical protein binding	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0010170: glucose-1-phosphate adenylyltransferase complex	0.00E+00
2	GO:0009507: chloroplast	5.13E-17
3	GO:0009570: chloroplast stroma	2.16E-08
4	GO:0009706: chloroplast inner membrane	1.96E-05
5	GO:0009941: chloroplast envelope	2.41E-05
6	GO:0009535: chloroplast thylakoid membrane	9.39E-05
7	GO:0010007: magnesium chelatase complex	2.93E-04
8	GO:0005828: kinetochore microtubule	5.65E-04
9	GO:0000776: kinetochore	7.14E-04
10	GO:0000777: condensed chromosome kinetochore	1.04E-03
11	GO:0009534: chloroplast thylakoid	1.10E-03
12	GO:0031969: chloroplast membrane	1.37E-03
13	GO:0031901: early endosome membrane	1.80E-03
14	GO:0005876: spindle microtubule	2.01E-03
15	GO:0032040: small-subunit processome	2.70E-03
16	GO:0009508: plastid chromosome	2.94E-03
17	GO:0030076: light-harvesting complex	3.44E-03
18	GO:0015935: small ribosomal subunit	4.54E-03
19	GO:0015629: actin cytoskeleton	5.13E-03
20	GO:0010319: stromule	8.79E-03
21	GO:0009295: nucleoid	8.79E-03
22	GO:0009707: chloroplast outer membrane	1.15E-02
23	GO:0015934: large ribosomal subunit	1.27E-02
24	GO:0009536: plastid	1.47E-02
25	GO:0031201: SNARE complex	1.54E-02
26	GO:0005856: cytoskeleton	1.77E-02
27	GO:0010287: plastoglobule	2.92E-02
28	GO:0005623: cell	3.09E-02
29	GO:0009524: phragmoplast	3.15E-02