co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G33660

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010068: protoderm histogenesis	0.00E+00
2	GO:0090706: specification of plant organ position	0.00E+00
3	GO:0010450: inflorescence meristem growth	2.53E-05
4	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	2.53E-05
5	GO:0045165: cell fate commitment	1.13E-04
6	GO:0048645: animal organ formation	1.69E-04
7	GO:2001141: regulation of RNA biosynthetic process	1.69E-04
8	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.69E-04
9	GO:0016556: mRNA modification	1.69E-04
10	GO:0046907: intracellular transport	2.95E-04
11	GO:1902183: regulation of shoot apical meristem development	2.95E-04
12	GO:0010158: abaxial cell fate specification	2.95E-04
13	GO:0071333: cellular response to glucose stimulus	4.36E-04
14	GO:0010093: specification of floral organ identity	6.69E-04
15	GO:0071482: cellular response to light stimulus	6.69E-04
16	GO:2000024: regulation of leaf development	7.52E-04
17	GO:1900865: chloroplast RNA modification	8.38E-04
18	GO:0031425: chloroplast RNA processing	8.38E-04
19	GO:0009641: shade avoidance	9.24E-04
20	GO:0010629: negative regulation of gene expression	9.24E-04
21	GO:0006352: DNA-templated transcription, initiation	1.01E-03
22	GO:0045490: pectin catabolic process	1.30E-03
23	GO:0009933: meristem structural organization	1.30E-03
24	GO:0009944: polarity specification of adaxial/abaxial axis	1.61E-03
25	GO:0010431: seed maturation	1.83E-03
26	GO:0006730: one-carbon metabolic process	1.95E-03
27	GO:0009561: megagametogenesis	2.18E-03
28	GO:0051028: mRNA transport	2.30E-03
29	GO:0010501: RNA secondary structure unwinding	2.42E-03
30	GO:0042335: cuticle development	2.42E-03
31	GO:0010154: fruit development	2.55E-03
32	GO:0015979: photosynthesis	2.80E-03
33	GO:0032502: developmental process	3.07E-03
34	GO:0010027: thylakoid membrane organization	3.77E-03
35	GO:0009627: systemic acquired resistance	4.06E-03
36	GO:0009407: toxin catabolic process	4.83E-03
37	GO:0006839: mitochondrial transport	5.81E-03
38	GO:0009636: response to toxic substance	6.85E-03
39	GO:0006486: protein glycosylation	7.78E-03
40	GO:0009909: regulation of flower development	8.35E-03
41	GO:0006096: glycolytic process	8.74E-03
42	GO:0048367: shoot system development	8.93E-03
43	GO:0048316: seed development	8.93E-03
44	GO:0009742: brassinosteroid mediated signaling pathway	1.04E-02
45	GO:0006633: fatty acid biosynthetic process	1.37E-02
46	GO:0040008: regulation of growth	1.42E-02
47	GO:0007623: circadian rhythm	1.46E-02
48	GO:0009451: RNA modification	1.49E-02
49	GO:0007166: cell surface receptor signaling pathway	1.61E-02
50	GO:0006810: transport	1.90E-02
51	GO:0080167: response to karrikin	2.32E-02
52	GO:0046777: protein autophosphorylation	2.44E-02
53	GO:0006629: lipid metabolic process	3.07E-02
54	GO:0006397: mRNA processing	3.16E-02
55	GO:0016310: phosphorylation	3.18E-02

Rank	GO Term	Adjusted P value
1	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	6.44E-05
2	GO:0016829: lyase activity	6.89E-05
3	GO:0030570: pectate lyase activity	7.16E-05
4	GO:0001053: plastid sigma factor activity	2.30E-04
5	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.30E-04
6	GO:0016987: sigma factor activity	2.30E-04
7	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.95E-04
8	GO:0004462: lactoylglutathione lyase activity	3.65E-04
9	GO:0030955: potassium ion binding	8.38E-04
10	GO:0004743: pyruvate kinase activity	8.38E-04
11	GO:0008378: galactosyltransferase activity	1.11E-03
12	GO:0031072: heat shock protein binding	1.20E-03
13	GO:0005199: structural constituent of cell wall	2.55E-03
14	GO:0048038: quinone binding	2.94E-03
15	GO:0004519: endonuclease activity	3.92E-03
16	GO:0004004: ATP-dependent RNA helicase activity	4.21E-03
17	GO:0004712: protein serine/threonine/tyrosine kinase activity	5.64E-03
18	GO:0016301: kinase activity	6.05E-03
19	GO:0004364: glutathione transferase activity	6.15E-03
20	GO:0003723: RNA binding	6.74E-03
21	GO:0046872: metal ion binding	7.49E-03
22	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	7.78E-03
23	GO:0051082: unfolded protein binding	9.95E-03
24	GO:0008026: ATP-dependent helicase activity	1.04E-02
25	GO:0004386: helicase activity	1.06E-02
26	GO:0016758: transferase activity, transferring hexosyl groups	1.14E-02
27	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.39E-02
28	GO:0003729: mRNA binding	1.93E-02
29	GO:0000287: magnesium ion binding	1.97E-02
30	GO:0009055: electron carrier activity	3.23E-02
31	GO:0000166: nucleotide binding	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	3.76E-06
2	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	7.52E-04
3	GO:0009654: photosystem II oxygen evolving complex	1.72E-03
4	GO:0019898: extrinsic component of membrane	2.80E-03
5	GO:0005643: nuclear pore	4.52E-03
6	GO:0009535: chloroplast thylakoid membrane	5.59E-03
7	GO:0009579: thylakoid	7.61E-03
8	GO:0031225: anchored component of membrane	9.94E-03
9	GO:0005654: nucleoplasm	1.14E-02
10	GO:0009543: chloroplast thylakoid lumen	1.17E-02
11	GO:0005623: cell	1.19E-02
12	GO:0009505: plant-type cell wall	1.62E-02
13	GO:0046658: anchored component of plasma membrane	1.79E-02
14	GO:0009570: chloroplast stroma	2.18E-02
15	GO:0005743: mitochondrial inner membrane	2.91E-02
16	GO:0043231: intracellular membrane-bounded organelle	3.29E-02
17	GO:0048046: apoplast	4.69E-02