Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G31980

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032497: detection of lipopolysaccharide0.00E+00
2GO:0000731: DNA synthesis involved in DNA repair0.00E+00
3GO:0046373: L-arabinose metabolic process9.72E-05
4GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity1.68E-04
5GO:0009738: abscisic acid-activated signaling pathway2.23E-04
6GO:0010440: stomatal lineage progression2.48E-04
7GO:0015696: ammonium transport2.48E-04
8GO:0072488: ammonium transmembrane transport3.33E-04
9GO:0034052: positive regulation of plant-type hypersensitive response4.25E-04
10GO:0034314: Arp2/3 complex-mediated actin nucleation5.22E-04
11GO:0006014: D-ribose metabolic process5.22E-04
12GO:0016051: carbohydrate biosynthetic process5.52E-04
13GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response6.22E-04
14GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c7.28E-04
15GO:1900056: negative regulation of leaf senescence7.28E-04
16GO:0000209: protein polyubiquitination7.32E-04
17GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process8.46E-04
18GO:2000031: regulation of salicylic acid mediated signaling pathway9.50E-04
19GO:0071482: cellular response to light stimulus9.50E-04
20GO:0006261: DNA-dependent DNA replication9.50E-04
21GO:0051865: protein autoubiquitination1.07E-03
22GO:0010112: regulation of systemic acquired resistance1.07E-03
23GO:0000902: cell morphogenesis1.07E-03
24GO:0009626: plant-type hypersensitive response1.16E-03
25GO:2000280: regulation of root development1.19E-03
26GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.19E-03
27GO:0055062: phosphate ion homeostasis1.31E-03
28GO:0018105: peptidyl-serine phosphorylation1.35E-03
29GO:0009682: induced systemic resistance1.44E-03
30GO:0018107: peptidyl-threonine phosphorylation1.72E-03
31GO:0007015: actin filament organization1.86E-03
32GO:0009825: multidimensional cell growth2.01E-03
33GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.49E-03
34GO:2000022: regulation of jasmonic acid mediated signaling pathway2.80E-03
35GO:0031348: negative regulation of defense response2.80E-03
36GO:0009625: response to insect2.97E-03
37GO:0000271: polysaccharide biosynthetic process3.50E-03
38GO:0045489: pectin biosynthetic process3.69E-03
39GO:0048544: recognition of pollen3.87E-03
40GO:0019252: starch biosynthetic process4.06E-03
41GO:0010200: response to chitin4.37E-03
42GO:0046777: protein autophosphorylation4.52E-03
43GO:0010090: trichome morphogenesis4.65E-03
44GO:0001666: response to hypoxia5.47E-03
45GO:0009788: negative regulation of abscisic acid-activated signaling pathway5.69E-03
46GO:0009816: defense response to bacterium, incompatible interaction5.69E-03
47GO:0009627: systemic acquired resistance5.91E-03
48GO:0009408: response to heat6.23E-03
49GO:0008219: cell death6.58E-03
50GO:0000724: double-strand break repair via homologous recombination7.51E-03
51GO:0045087: innate immune response7.75E-03
52GO:0006952: defense response9.41E-03
53GO:0006855: drug transmembrane transport1.03E-02
54GO:0006260: DNA replication1.06E-02
55GO:0031347: regulation of defense response1.06E-02
56GO:0035556: intracellular signal transduction1.17E-02
57GO:0009624: response to nematode1.46E-02
58GO:0006468: protein phosphorylation1.55E-02
59GO:0009845: seed germination1.81E-02
60GO:0006633: fatty acid biosynthetic process2.02E-02
61GO:0006470: protein dephosphorylation2.37E-02
62GO:0009617: response to bacterium2.45E-02
63GO:0080167: response to karrikin3.43E-02
64GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.51E-02
65GO:0009751: response to salicylic acid4.48E-02
66GO:0007165: signal transduction4.66E-02
67GO:0009737: response to abscisic acid4.76E-02
68GO:0008152: metabolic process4.85E-02
RankGO TermAdjusted P value
1GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.90E-05
2GO:0001047: core promoter binding9.72E-05
3GO:0031176: endo-1,4-beta-xylanase activity2.48E-04
4GO:0046556: alpha-L-arabinofuranosidase activity3.33E-04
5GO:0016301: kinase activity4.27E-04
6GO:0043531: ADP binding4.34E-04
7GO:0008519: ammonium transmembrane transporter activity5.22E-04
8GO:0004747: ribokinase activity6.22E-04
9GO:0008121: ubiquinol-cytochrome-c reductase activity7.28E-04
10GO:0008865: fructokinase activity8.37E-04
11GO:0003887: DNA-directed DNA polymerase activity2.16E-03
12GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.80E-03
13GO:0061630: ubiquitin protein ligase activity4.45E-03
14GO:0005200: structural constituent of cytoskeleton5.05E-03
15GO:0009931: calcium-dependent protein serine/threonine kinase activity5.91E-03
16GO:0004683: calmodulin-dependent protein kinase activity6.13E-03
17GO:0016798: hydrolase activity, acting on glycosyl bonds6.13E-03
18GO:0004672: protein kinase activity6.62E-03
19GO:0015238: drug transmembrane transporter activity6.80E-03
20GO:0005524: ATP binding7.57E-03
21GO:0004674: protein serine/threonine kinase activity7.86E-03
22GO:0043621: protein self-association9.77E-03
23GO:0031625: ubiquitin protein ligase binding1.23E-02
24GO:0003779: actin binding1.43E-02
25GO:0030246: carbohydrate binding1.49E-02
26GO:0016758: transferase activity, transferring hexosyl groups1.68E-02
27GO:0016757: transferase activity, transferring glycosyl groups1.92E-02
28GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.05E-02
29GO:0005509: calcium ion binding2.07E-02
30GO:0015297: antiporter activity2.09E-02
31GO:0044212: transcription regulatory region DNA binding2.25E-02
32GO:0004842: ubiquitin-protein transferase activity3.11E-02
33GO:0005515: protein binding3.60E-02
34GO:0004722: protein serine/threonine phosphatase activity4.16E-02
RankGO TermAdjusted P value
1GO:0043625: delta DNA polymerase complex3.90E-05
2GO:0005885: Arp2/3 protein complex6.22E-04
3GO:0005578: proteinaceous extracellular matrix1.72E-03
4GO:0005750: mitochondrial respiratory chain complex III1.86E-03
5GO:0090406: pollen tube9.25E-03
6GO:0016021: integral component of membrane9.74E-03
7GO:0005886: plasma membrane1.60E-02
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Gene type



Gene DE type