Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G31860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
2GO:0002764: immune response-regulating signaling pathway0.00E+00
3GO:0019567: arabinose biosynthetic process9.69E-05
4GO:0010115: regulation of abscisic acid biosynthetic process2.28E-04
5GO:0010271: regulation of chlorophyll catabolic process2.28E-04
6GO:0019725: cellular homeostasis2.28E-04
7GO:0010167: response to nitrate2.48E-04
8GO:0010200: response to chitin3.67E-04
9GO:0016045: detection of bacterium3.80E-04
10GO:0034051: negative regulation of plant-type hypersensitive response3.80E-04
11GO:1900140: regulation of seedling development3.80E-04
12GO:0010359: regulation of anion channel activity3.80E-04
13GO:0051176: positive regulation of sulfur metabolic process3.80E-04
14GO:0046777: protein autophosphorylation3.87E-04
15GO:0016226: iron-sulfur cluster assembly4.10E-04
16GO:0031348: negative regulation of defense response4.10E-04
17GO:0046836: glycolipid transport5.46E-04
18GO:0060548: negative regulation of cell death7.26E-04
19GO:0045227: capsule polysaccharide biosynthetic process7.26E-04
20GO:0033358: UDP-L-arabinose biosynthetic process7.26E-04
21GO:0010508: positive regulation of autophagy7.26E-04
22GO:0009697: salicylic acid biosynthetic process9.17E-04
23GO:0018258: protein O-linked glycosylation via hydroxyproline1.12E-03
24GO:0010405: arabinogalactan protein metabolic process1.12E-03
25GO:0009423: chorismate biosynthetic process1.34E-03
26GO:1900056: negative regulation of leaf senescence1.57E-03
27GO:0030001: metal ion transport1.96E-03
28GO:0006952: defense response1.98E-03
29GO:0010204: defense response signaling pathway, resistance gene-independent2.07E-03
30GO:0090333: regulation of stomatal closure2.33E-03
31GO:0046916: cellular transition metal ion homeostasis2.33E-03
32GO:0006855: drug transmembrane transport2.57E-03
33GO:0048268: clathrin coat assembly2.61E-03
34GO:0048354: mucilage biosynthetic process involved in seed coat development2.61E-03
35GO:0010380: regulation of chlorophyll biosynthetic process2.61E-03
36GO:0007064: mitotic sister chromatid cohesion2.90E-03
37GO:0009073: aromatic amino acid family biosynthetic process3.20E-03
38GO:0009909: regulation of flower development3.28E-03
39GO:0015706: nitrate transport3.50E-03
40GO:0006890: retrograde vesicle-mediated transport, Golgi to ER3.50E-03
41GO:0007165: signal transduction3.57E-03
42GO:0009751: response to salicylic acid3.61E-03
43GO:0009785: blue light signaling pathway3.82E-03
44GO:0006468: protein phosphorylation4.08E-03
45GO:0007034: vacuolar transport4.15E-03
46GO:0010540: basipetal auxin transport4.15E-03
47GO:0009266: response to temperature stimulus4.15E-03
48GO:0046854: phosphatidylinositol phosphorylation4.49E-03
49GO:0009225: nucleotide-sugar metabolic process4.49E-03
50GO:0009269: response to desiccation5.93E-03
51GO:0071456: cellular response to hypoxia6.31E-03
52GO:0010017: red or far-red light signaling pathway6.31E-03
53GO:0006012: galactose metabolic process6.70E-03
54GO:0010150: leaf senescence7.24E-03
55GO:0042147: retrograde transport, endosome to Golgi7.51E-03
56GO:0035556: intracellular signal transduction8.16E-03
57GO:0010468: regulation of gene expression8.64E-03
58GO:0009749: response to glucose9.23E-03
59GO:0006891: intra-Golgi vesicle-mediated transport9.68E-03
60GO:0048235: pollen sperm cell differentiation1.01E-02
61GO:0009630: gravitropism1.01E-02
62GO:0007264: small GTPase mediated signal transduction1.01E-02
63GO:0016579: protein deubiquitination1.20E-02
64GO:0009911: positive regulation of flower development1.25E-02
65GO:0042128: nitrate assimilation1.36E-02
66GO:0048573: photoperiodism, flowering1.41E-02
67GO:0006950: response to stress1.41E-02
68GO:0008219: cell death1.51E-02
69GO:0009832: plant-type cell wall biogenesis1.57E-02
70GO:0006499: N-terminal protein myristoylation1.62E-02
71GO:0048527: lateral root development1.68E-02
72GO:0010119: regulation of stomatal movement1.68E-02
73GO:0009910: negative regulation of flower development1.68E-02
74GO:0009867: jasmonic acid mediated signaling pathway1.79E-02
75GO:0045087: innate immune response1.79E-02
76GO:0006897: endocytosis2.02E-02
77GO:0009640: photomorphogenesis2.14E-02
78GO:0048364: root development2.15E-02
79GO:0006486: protein glycosylation2.65E-02
80GO:0009626: plant-type hypersensitive response3.12E-02
81GO:0009624: response to nematode3.41E-02
82GO:0009742: brassinosteroid mediated signaling pathway3.55E-02
83GO:0009611: response to wounding3.73E-02
84GO:0009737: response to abscisic acid4.76E-02
RankGO TermAdjusted P value
1GO:0004107: chorismate synthase activity0.00E+00
2GO:0022821: potassium ion antiporter activity2.28E-04
3GO:0017089: glycolipid transporter activity5.46E-04
4GO:0003924: GTPase activity6.36E-04
5GO:0005525: GTP binding6.89E-04
6GO:0050373: UDP-arabinose 4-epimerase activity7.26E-04
7GO:0051861: glycolipid binding7.26E-04
8GO:0019199: transmembrane receptor protein kinase activity7.26E-04
9GO:0070696: transmembrane receptor protein serine/threonine kinase binding9.17E-04
10GO:1990714: hydroxyproline O-galactosyltransferase activity1.12E-03
11GO:0016301: kinase activity1.13E-03
12GO:0003978: UDP-glucose 4-epimerase activity1.34E-03
13GO:0015238: drug transmembrane transporter activity1.44E-03
14GO:0004674: protein serine/threonine kinase activity1.52E-03
15GO:0004714: transmembrane receptor protein tyrosine kinase activity1.81E-03
16GO:0043531: ADP binding1.92E-03
17GO:0004430: 1-phosphatidylinositol 4-kinase activity2.07E-03
18GO:0015112: nitrate transmembrane transporter activity2.61E-03
19GO:0004568: chitinase activity2.90E-03
20GO:0005545: 1-phosphatidylinositol binding2.90E-03
21GO:0008047: enzyme activator activity2.90E-03
22GO:0005543: phospholipid binding3.20E-03
23GO:0008559: xenobiotic-transporting ATPase activity3.20E-03
24GO:0008378: galactosyltransferase activity3.50E-03
25GO:0033612: receptor serine/threonine kinase binding5.93E-03
26GO:0004707: MAP kinase activity5.93E-03
27GO:0015297: antiporter activity6.91E-03
28GO:0030276: clathrin binding8.35E-03
29GO:0010181: FMN binding8.79E-03
30GO:0004843: thiol-dependent ubiquitin-specific protease activity9.68E-03
31GO:0008375: acetylglucosaminyltransferase activity1.36E-02
32GO:0000987: core promoter proximal region sequence-specific DNA binding1.85E-02
33GO:0005215: transporter activity2.12E-02
34GO:0005515: protein binding2.26E-02
35GO:0051537: 2 iron, 2 sulfur cluster binding2.27E-02
36GO:0003899: DNA-directed 5'-3' RNA polymerase activity2.65E-02
37GO:0008234: cysteine-type peptidase activity2.85E-02
38GO:0004672: protein kinase activity3.02E-02
39GO:0005524: ATP binding3.88E-02
40GO:0016758: transferase activity, transferring hexosyl groups3.92E-02
41GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.78E-02
RankGO TermAdjusted P value
1GO:0005901: caveola2.28E-04
2GO:0030139: endocytic vesicle3.80E-04
3GO:0005886: plasma membrane2.99E-03
4GO:0090404: pollen tube tip3.20E-03
5GO:0005758: mitochondrial intermembrane space5.19E-03
6GO:0005905: clathrin-coated pit5.93E-03
7GO:0030136: clathrin-coated vesicle7.51E-03
8GO:0032580: Golgi cisterna membrane1.11E-02
9GO:0000325: plant-type vacuole1.68E-02
10GO:0031902: late endosome membrane2.02E-02
11GO:0009536: plastid2.41E-02
12GO:0005794: Golgi apparatus2.42E-02
13GO:0012505: endomembrane system3.33E-02
14GO:0005730: nucleolus3.59E-02
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Gene type



Gene DE type