GO Enrichment Analysis of Co-expressed Genes with
AT4G31670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006489: dolichyl diphosphate biosynthetic process | 0.00E+00 |
| 2 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 3 | GO:0006511: ubiquitin-dependent protein catabolic process | 8.21E-10 |
| 4 | GO:0018279: protein N-linked glycosylation via asparagine | 1.72E-06 |
| 5 | GO:0046686: response to cadmium ion | 8.68E-06 |
| 6 | GO:0080120: CAAX-box protein maturation | 2.76E-05 |
| 7 | GO:0071586: CAAX-box protein processing | 2.76E-05 |
| 8 | GO:0034976: response to endoplasmic reticulum stress | 4.67E-05 |
| 9 | GO:0006487: protein N-linked glycosylation | 5.28E-05 |
| 10 | GO:0051788: response to misfolded protein | 7.01E-05 |
| 11 | GO:0051258: protein polymerization | 7.01E-05 |
| 12 | GO:0010498: proteasomal protein catabolic process | 1.23E-04 |
| 13 | GO:0055074: calcium ion homeostasis | 1.23E-04 |
| 14 | GO:0009647: skotomorphogenesis | 1.83E-04 |
| 15 | GO:0010255: glucose mediated signaling pathway | 1.83E-04 |
| 16 | GO:0010483: pollen tube reception | 2.48E-04 |
| 17 | GO:0010363: regulation of plant-type hypersensitive response | 2.48E-04 |
| 18 | GO:0006461: protein complex assembly | 3.18E-04 |
| 19 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 3.92E-04 |
| 20 | GO:0043248: proteasome assembly | 3.92E-04 |
| 21 | GO:0010189: vitamin E biosynthetic process | 4.69E-04 |
| 22 | GO:0000054: ribosomal subunit export from nucleus | 4.69E-04 |
| 23 | GO:0048528: post-embryonic root development | 5.49E-04 |
| 24 | GO:0000338: protein deneddylation | 5.49E-04 |
| 25 | GO:0031540: regulation of anthocyanin biosynthetic process | 6.32E-04 |
| 26 | GO:0048766: root hair initiation | 6.32E-04 |
| 27 | GO:0006526: arginine biosynthetic process | 7.18E-04 |
| 28 | GO:0006972: hyperosmotic response | 7.18E-04 |
| 29 | GO:0009932: cell tip growth | 7.18E-04 |
| 30 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 7.18E-04 |
| 31 | GO:0009553: embryo sac development | 8.40E-04 |
| 32 | GO:0048765: root hair cell differentiation | 1.09E-03 |
| 33 | GO:0046856: phosphatidylinositol dephosphorylation | 1.09E-03 |
| 34 | GO:0010075: regulation of meristem growth | 1.29E-03 |
| 35 | GO:0006457: protein folding | 1.32E-03 |
| 36 | GO:0009934: regulation of meristem structural organization | 1.40E-03 |
| 37 | GO:0010053: root epidermal cell differentiation | 1.50E-03 |
| 38 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.62E-03 |
| 39 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.09E-03 |
| 40 | GO:0009651: response to salt stress | 2.23E-03 |
| 41 | GO:0009306: protein secretion | 2.35E-03 |
| 42 | GO:0006606: protein import into nucleus | 2.61E-03 |
| 43 | GO:0008360: regulation of cell shape | 2.74E-03 |
| 44 | GO:0048868: pollen tube development | 2.74E-03 |
| 45 | GO:0009646: response to absence of light | 2.88E-03 |
| 46 | GO:0048825: cotyledon development | 3.02E-03 |
| 47 | GO:0045454: cell redox homeostasis | 3.27E-03 |
| 48 | GO:0030163: protein catabolic process | 3.45E-03 |
| 49 | GO:0006914: autophagy | 3.60E-03 |
| 50 | GO:0009567: double fertilization forming a zygote and endosperm | 3.60E-03 |
| 51 | GO:0016579: protein deubiquitination | 3.90E-03 |
| 52 | GO:0048767: root hair elongation | 5.04E-03 |
| 53 | GO:0010311: lateral root formation | 5.04E-03 |
| 54 | GO:0010043: response to zinc ion | 5.38E-03 |
| 55 | GO:0009793: embryo development ending in seed dormancy | 6.71E-03 |
| 56 | GO:0009640: photomorphogenesis | 6.82E-03 |
| 57 | GO:0000209: protein polyubiquitination | 7.01E-03 |
| 58 | GO:0009664: plant-type cell wall organization | 7.99E-03 |
| 59 | GO:0009736: cytokinin-activated signaling pathway | 8.40E-03 |
| 60 | GO:0009585: red, far-red light phototransduction | 8.40E-03 |
| 61 | GO:0051603: proteolysis involved in cellular protein catabolic process | 8.60E-03 |
| 62 | GO:0043086: negative regulation of catalytic activity | 9.44E-03 |
| 63 | GO:0006413: translational initiation | 1.51E-02 |
| 64 | GO:0009409: response to cold | 1.96E-02 |
| 65 | GO:0009826: unidimensional cell growth | 2.10E-02 |
| 66 | GO:0048366: leaf development | 2.42E-02 |
| 67 | GO:0032259: methylation | 3.22E-02 |
| 68 | GO:0009408: response to heat | 3.32E-02 |
| 69 | GO:0006508: proteolysis | 4.43E-02 |
| 70 | GO:0009908: flower development | 4.65E-02 |
| 71 | GO:0009735: response to cytokinin | 4.68E-02 |
| 72 | GO:0009555: pollen development | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 2 | GO:0004298: threonine-type endopeptidase activity | 7.30E-07 |
| 3 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.72E-06 |
| 4 | GO:0008233: peptidase activity | 1.70E-05 |
| 5 | GO:0015157: oligosaccharide transmembrane transporter activity | 2.76E-05 |
| 6 | GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity | 2.76E-05 |
| 7 | GO:0018708: thiol S-methyltransferase activity | 7.01E-05 |
| 8 | GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity | 7.01E-05 |
| 9 | GO:0004848: ureidoglycolate hydrolase activity | 1.23E-04 |
| 10 | GO:0036402: proteasome-activating ATPase activity | 3.92E-04 |
| 11 | GO:0051920: peroxiredoxin activity | 4.69E-04 |
| 12 | GO:0016209: antioxidant activity | 6.32E-04 |
| 13 | GO:0031625: ubiquitin protein ligase binding | 6.80E-04 |
| 14 | GO:0003843: 1,3-beta-D-glucan synthase activity | 7.18E-04 |
| 15 | GO:0051082: unfolded protein binding | 8.63E-04 |
| 16 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 9.92E-04 |
| 17 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.29E-03 |
| 18 | GO:0004175: endopeptidase activity | 1.40E-03 |
| 19 | GO:0017025: TBP-class protein binding | 1.50E-03 |
| 20 | GO:0043130: ubiquitin binding | 1.73E-03 |
| 21 | GO:0043424: protein histidine kinase binding | 1.85E-03 |
| 22 | GO:0003756: protein disulfide isomerase activity | 2.35E-03 |
| 23 | GO:0016853: isomerase activity | 2.88E-03 |
| 24 | GO:0061630: ubiquitin protein ligase activity | 2.88E-03 |
| 25 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 3.16E-03 |
| 26 | GO:0004518: nuclease activity | 3.31E-03 |
| 27 | GO:0008237: metallopeptidase activity | 3.75E-03 |
| 28 | GO:0003924: GTPase activity | 4.03E-03 |
| 29 | GO:0004222: metalloendopeptidase activity | 5.21E-03 |
| 30 | GO:0016887: ATPase activity | 6.22E-03 |
| 31 | GO:0000166: nucleotide binding | 7.12E-03 |
| 32 | GO:0008026: ATP-dependent helicase activity | 1.12E-02 |
| 33 | GO:0005525: GTP binding | 1.17E-02 |
| 34 | GO:0046910: pectinesterase inhibitor activity | 1.51E-02 |
| 35 | GO:0005524: ATP binding | 1.75E-02 |
| 36 | GO:0003743: translation initiation factor activity | 1.77E-02 |
| 37 | GO:0004842: ubiquitin-protein transferase activity | 2.00E-02 |
| 38 | GO:0008168: methyltransferase activity | 2.10E-02 |
| 39 | GO:0000287: magnesium ion binding | 2.13E-02 |
| 40 | GO:0004601: peroxidase activity | 2.16E-02 |
| 41 | GO:0046872: metal ion binding | 2.81E-02 |
| 42 | GO:0005515: protein binding | 3.19E-02 |
| 43 | GO:0008289: lipid binding | 4.20E-02 |
| 44 | GO:0016757: transferase activity, transferring glycosyl groups | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 8.51E-09 |
| 2 | GO:0005774: vacuolar membrane | 5.38E-07 |
| 3 | GO:0005783: endoplasmic reticulum | 6.30E-07 |
| 4 | GO:0005839: proteasome core complex | 7.30E-07 |
| 5 | GO:0008250: oligosaccharyltransferase complex | 1.72E-06 |
| 6 | GO:0005773: vacuole | 2.66E-06 |
| 7 | GO:0019773: proteasome core complex, alpha-subunit complex | 9.62E-06 |
| 8 | GO:0005788: endoplasmic reticulum lumen | 2.29E-04 |
| 9 | GO:0031597: cytosolic proteasome complex | 4.69E-04 |
| 10 | GO:0031595: nuclear proteasome complex | 5.49E-04 |
| 11 | GO:0000148: 1,3-beta-D-glucan synthase complex | 7.18E-04 |
| 12 | GO:0008180: COP9 signalosome | 8.07E-04 |
| 13 | GO:0008540: proteasome regulatory particle, base subcomplex | 8.99E-04 |
| 14 | GO:0005829: cytosol | 9.16E-04 |
| 15 | GO:0048471: perinuclear region of cytoplasm | 1.09E-03 |
| 16 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.09E-03 |
| 17 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.50E-03 |
| 18 | GO:0048046: apoplast | 2.52E-03 |
| 19 | GO:0009504: cell plate | 3.02E-03 |
| 20 | GO:0009506: plasmodesma | 4.87E-03 |
| 21 | GO:0005635: nuclear envelope | 8.81E-03 |
| 22 | GO:0005886: plasma membrane | 8.91E-03 |
| 23 | GO:0009706: chloroplast inner membrane | 1.07E-02 |
| 24 | GO:0005622: intracellular | 1.27E-02 |
| 25 | GO:0005623: cell | 1.28E-02 |
| 26 | GO:0009941: chloroplast envelope | 1.65E-02 |
| 27 | GO:0009505: plant-type cell wall | 1.81E-02 |
| 28 | GO:0016020: membrane | 1.94E-02 |
| 29 | GO:0005789: endoplasmic reticulum membrane | 2.21E-02 |
| 30 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.30E-02 |
| 31 | GO:0005730: nucleolus | 2.45E-02 |
| 32 | GO:0031969: chloroplast membrane | 2.51E-02 |
| 33 | GO:0005794: Golgi apparatus | 2.78E-02 |
| 34 | GO:0009507: chloroplast | 3.45E-02 |
| 35 | GO:0022626: cytosolic ribosome | 4.84E-02 |