GO Enrichment Analysis of Co-expressed Genes with
AT4G30950
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 3 | GO:0015979: photosynthesis | 3.26E-10 |
| 4 | GO:0015995: chlorophyll biosynthetic process | 6.95E-08 |
| 5 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 5.13E-07 |
| 6 | GO:0006000: fructose metabolic process | 1.95E-06 |
| 7 | GO:0090391: granum assembly | 1.95E-06 |
| 8 | GO:0009773: photosynthetic electron transport in photosystem I | 2.59E-06 |
| 9 | GO:0005983: starch catabolic process | 3.33E-06 |
| 10 | GO:0006094: gluconeogenesis | 4.21E-06 |
| 11 | GO:0045727: positive regulation of translation | 8.78E-06 |
| 12 | GO:0010196: nonphotochemical quenching | 4.27E-05 |
| 13 | GO:0009772: photosynthetic electron transport in photosystem II | 4.27E-05 |
| 14 | GO:0032544: plastid translation | 7.06E-05 |
| 15 | GO:0006002: fructose 6-phosphate metabolic process | 7.06E-05 |
| 16 | GO:0010206: photosystem II repair | 8.74E-05 |
| 17 | GO:0000025: maltose catabolic process | 9.88E-05 |
| 18 | GO:0005980: glycogen catabolic process | 9.88E-05 |
| 19 | GO:0071588: hydrogen peroxide mediated signaling pathway | 9.88E-05 |
| 20 | GO:0000023: maltose metabolic process | 9.88E-05 |
| 21 | GO:0009631: cold acclimation | 1.37E-04 |
| 22 | GO:0034599: cellular response to oxidative stress | 1.66E-04 |
| 23 | GO:0005986: sucrose biosynthetic process | 1.98E-04 |
| 24 | GO:0005976: polysaccharide metabolic process | 2.32E-04 |
| 25 | GO:0010353: response to trehalose | 2.32E-04 |
| 26 | GO:0006729: tetrahydrobiopterin biosynthetic process | 2.32E-04 |
| 27 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.49E-04 |
| 28 | GO:0061077: chaperone-mediated protein folding | 3.84E-04 |
| 29 | GO:0006518: peptide metabolic process | 3.86E-04 |
| 30 | GO:0055114: oxidation-reduction process | 3.87E-04 |
| 31 | GO:1902358: sulfate transmembrane transport | 5.54E-04 |
| 32 | GO:0000302: response to reactive oxygen species | 7.65E-04 |
| 33 | GO:0006461: protein complex assembly | 9.32E-04 |
| 34 | GO:0010027: thylakoid membrane organization | 1.09E-03 |
| 35 | GO:0016311: dephosphorylation | 1.33E-03 |
| 36 | GO:0009735: response to cytokinin | 1.36E-03 |
| 37 | GO:0010189: vitamin E biosynthetic process | 1.36E-03 |
| 38 | GO:0009854: oxidative photosynthetic carbon pathway | 1.36E-03 |
| 39 | GO:0010019: chloroplast-nucleus signaling pathway | 1.36E-03 |
| 40 | GO:0018298: protein-chromophore linkage | 1.40E-03 |
| 41 | GO:0010218: response to far red light | 1.54E-03 |
| 42 | GO:0008272: sulfate transport | 1.59E-03 |
| 43 | GO:0009610: response to symbiotic fungus | 1.59E-03 |
| 44 | GO:0009637: response to blue light | 1.77E-03 |
| 45 | GO:0009642: response to light intensity | 1.84E-03 |
| 46 | GO:0030091: protein repair | 1.84E-03 |
| 47 | GO:0045893: positive regulation of transcription, DNA-templated | 1.92E-03 |
| 48 | GO:0009657: plastid organization | 2.10E-03 |
| 49 | GO:0010114: response to red light | 2.27E-03 |
| 50 | GO:0006098: pentose-phosphate shunt | 2.37E-03 |
| 51 | GO:0006754: ATP biosynthetic process | 2.37E-03 |
| 52 | GO:0009641: shade avoidance | 2.95E-03 |
| 53 | GO:0006364: rRNA processing | 3.04E-03 |
| 54 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.25E-03 |
| 55 | GO:0043085: positive regulation of catalytic activity | 3.25E-03 |
| 56 | GO:0000272: polysaccharide catabolic process | 3.25E-03 |
| 57 | GO:0009750: response to fructose | 3.25E-03 |
| 58 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.25E-03 |
| 59 | GO:0018107: peptidyl-threonine phosphorylation | 3.89E-03 |
| 60 | GO:0019253: reductive pentose-phosphate cycle | 4.22E-03 |
| 61 | GO:0010207: photosystem II assembly | 4.22E-03 |
| 62 | GO:0010223: secondary shoot formation | 4.22E-03 |
| 63 | GO:0009266: response to temperature stimulus | 4.22E-03 |
| 64 | GO:0005985: sucrose metabolic process | 4.57E-03 |
| 65 | GO:0006636: unsaturated fatty acid biosynthetic process | 4.92E-03 |
| 66 | GO:0042744: hydrogen peroxide catabolic process | 6.13E-03 |
| 67 | GO:0035428: hexose transmembrane transport | 6.42E-03 |
| 68 | GO:0070417: cellular response to cold | 7.64E-03 |
| 69 | GO:0042631: cellular response to water deprivation | 8.07E-03 |
| 70 | GO:0006810: transport | 8.15E-03 |
| 71 | GO:0006662: glycerol ether metabolic process | 8.50E-03 |
| 72 | GO:0046323: glucose import | 8.50E-03 |
| 73 | GO:0015986: ATP synthesis coupled proton transport | 8.94E-03 |
| 74 | GO:0009658: chloroplast organization | 1.15E-02 |
| 75 | GO:0042254: ribosome biogenesis | 1.17E-02 |
| 76 | GO:0080167: response to karrikin | 1.43E-02 |
| 77 | GO:0007568: aging | 1.71E-02 |
| 78 | GO:0009853: photorespiration | 1.82E-02 |
| 79 | GO:0006629: lipid metabolic process | 2.11E-02 |
| 80 | GO:0009409: response to cold | 2.81E-02 |
| 81 | GO:0006096: glycolytic process | 3.04E-02 |
| 82 | GO:0046686: response to cadmium ion | 3.35E-02 |
| 83 | GO:0018105: peptidyl-serine phosphorylation | 3.54E-02 |
| 84 | GO:0006633: fatty acid biosynthetic process | 4.78E-02 |
| 85 | GO:0009737: response to abscisic acid | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 2 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 3 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 4 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 5 | GO:0010297: heteropolysaccharide binding | 5.13E-07 |
| 6 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 5.13E-07 |
| 7 | GO:0005528: FK506 binding | 9.35E-06 |
| 8 | GO:0004130: cytochrome-c peroxidase activity | 2.21E-05 |
| 9 | GO:0019843: rRNA binding | 6.79E-05 |
| 10 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 9.88E-05 |
| 11 | GO:0004134: 4-alpha-glucanotransferase activity | 9.88E-05 |
| 12 | GO:0004645: phosphorylase activity | 9.88E-05 |
| 13 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 9.88E-05 |
| 14 | GO:0050521: alpha-glucan, water dikinase activity | 9.88E-05 |
| 15 | GO:0008184: glycogen phosphorylase activity | 9.88E-05 |
| 16 | GO:0018708: thiol S-methyltransferase activity | 2.32E-04 |
| 17 | GO:0016630: protochlorophyllide reductase activity | 2.32E-04 |
| 18 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.32E-04 |
| 19 | GO:0042389: omega-3 fatty acid desaturase activity | 2.32E-04 |
| 20 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.73E-04 |
| 21 | GO:0031409: pigment binding | 2.84E-04 |
| 22 | GO:0070402: NADPH binding | 3.86E-04 |
| 23 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.86E-04 |
| 24 | GO:0019201: nucleotide kinase activity | 5.54E-04 |
| 25 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 5.54E-04 |
| 26 | GO:0016851: magnesium chelatase activity | 5.54E-04 |
| 27 | GO:0050662: coenzyme binding | 6.69E-04 |
| 28 | GO:0016688: L-ascorbate peroxidase activity | 1.14E-03 |
| 29 | GO:0008200: ion channel inhibitor activity | 1.14E-03 |
| 30 | GO:2001070: starch binding | 1.14E-03 |
| 31 | GO:0004332: fructose-bisphosphate aldolase activity | 1.14E-03 |
| 32 | GO:0016168: chlorophyll binding | 1.15E-03 |
| 33 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.36E-03 |
| 34 | GO:0004017: adenylate kinase activity | 1.36E-03 |
| 35 | GO:0004033: aldo-keto reductase (NADP) activity | 1.84E-03 |
| 36 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.10E-03 |
| 37 | GO:0008271: secondary active sulfate transmembrane transporter activity | 2.10E-03 |
| 38 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 2.65E-03 |
| 39 | GO:0030234: enzyme regulator activity | 2.95E-03 |
| 40 | GO:0008047: enzyme activator activity | 2.95E-03 |
| 41 | GO:0015386: potassium:proton antiporter activity | 3.25E-03 |
| 42 | GO:0044183: protein binding involved in protein folding | 3.25E-03 |
| 43 | GO:0047372: acylglycerol lipase activity | 3.25E-03 |
| 44 | GO:0015116: sulfate transmembrane transporter activity | 3.57E-03 |
| 45 | GO:0004565: beta-galactosidase activity | 3.89E-03 |
| 46 | GO:0031072: heat shock protein binding | 3.89E-03 |
| 47 | GO:0008266: poly(U) RNA binding | 4.22E-03 |
| 48 | GO:0015079: potassium ion transmembrane transporter activity | 5.65E-03 |
| 49 | GO:0016491: oxidoreductase activity | 6.91E-03 |
| 50 | GO:0003756: protein disulfide isomerase activity | 7.23E-03 |
| 51 | GO:0047134: protein-disulfide reductase activity | 7.64E-03 |
| 52 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 8.50E-03 |
| 53 | GO:0008536: Ran GTPase binding | 8.50E-03 |
| 54 | GO:0005355: glucose transmembrane transporter activity | 8.94E-03 |
| 55 | GO:0004791: thioredoxin-disulfide reductase activity | 8.94E-03 |
| 56 | GO:0048038: quinone binding | 9.85E-03 |
| 57 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.08E-02 |
| 58 | GO:0004222: metalloendopeptidase activity | 1.65E-02 |
| 59 | GO:0003746: translation elongation factor activity | 1.82E-02 |
| 60 | GO:0003993: acid phosphatase activity | 1.88E-02 |
| 61 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.31E-02 |
| 62 | GO:0015293: symporter activity | 2.37E-02 |
| 63 | GO:0051082: unfolded protein binding | 3.47E-02 |
| 64 | GO:0015035: protein disulfide oxidoreductase activity | 3.54E-02 |
| 65 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.15E-02 |
| 66 | GO:0030170: pyridoxal phosphate binding | 4.38E-02 |
| 67 | GO:0015144: carbohydrate transmembrane transporter activity | 4.62E-02 |
| 68 | GO:0016787: hydrolase activity | 4.94E-02 |
| 69 | GO:0046872: metal ion binding | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.37E-41 |
| 3 | GO:0009534: chloroplast thylakoid | 1.86E-38 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 3.62E-32 |
| 5 | GO:0009941: chloroplast envelope | 6.34E-25 |
| 6 | GO:0009579: thylakoid | 4.95E-18 |
| 7 | GO:0009570: chloroplast stroma | 3.21E-11 |
| 8 | GO:0010287: plastoglobule | 3.10E-09 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 3.78E-09 |
| 10 | GO:0031977: thylakoid lumen | 6.04E-09 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.07E-06 |
| 12 | GO:0031969: chloroplast membrane | 2.65E-06 |
| 13 | GO:0031357: integral component of chloroplast inner membrane | 2.32E-04 |
| 14 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 2.32E-04 |
| 15 | GO:0030076: light-harvesting complex | 2.54E-04 |
| 16 | GO:0010007: magnesium chelatase complex | 3.86E-04 |
| 17 | GO:0009706: chloroplast inner membrane | 5.21E-04 |
| 18 | GO:0009522: photosystem I | 6.69E-04 |
| 19 | GO:0009523: photosystem II | 7.16E-04 |
| 20 | GO:0009544: chloroplast ATP synthase complex | 7.37E-04 |
| 21 | GO:0010319: stromule | 9.73E-04 |
| 22 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.14E-03 |
| 23 | GO:0009533: chloroplast stromal thylakoid | 1.59E-03 |
| 24 | GO:0009538: photosystem I reaction center | 1.84E-03 |
| 25 | GO:0048046: apoplast | 2.91E-03 |
| 26 | GO:0030095: chloroplast photosystem II | 4.22E-03 |
| 27 | GO:0042651: thylakoid membrane | 5.65E-03 |
| 28 | GO:0015935: small ribosomal subunit | 6.03E-03 |
| 29 | GO:0016020: membrane | 1.25E-02 |
| 30 | GO:0009707: chloroplast outer membrane | 1.54E-02 |
| 31 | GO:0005840: ribosome | 2.04E-02 |
| 32 | GO:0016021: integral component of membrane | 3.35E-02 |
| 33 | GO:0005623: cell | 4.15E-02 |