co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G30810

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0046460: neutral lipid biosynthetic process	0.00E+00
3	GO:0090355: positive regulation of auxin metabolic process	0.00E+00
4	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
5	GO:0043972: histone H3-K23 acetylation	0.00E+00
6	GO:0090358: positive regulation of tryptophan metabolic process	0.00E+00
7	GO:0044154: histone H3-K14 acetylation	0.00E+00
8	GO:1901698: response to nitrogen compound	0.00E+00
9	GO:0048657: anther wall tapetum cell differentiation	1.50E-04
10	GO:0042547: cell wall modification involved in multidimensional cell growth	1.50E-04
11	GO:0000066: mitochondrial ornithine transport	1.50E-04
12	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	1.50E-04
13	GO:0051171: regulation of nitrogen compound metabolic process	1.50E-04
14	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	1.50E-04
15	GO:0043971: histone H3-K18 acetylation	1.50E-04
16	GO:0080005: photosystem stoichiometry adjustment	3.42E-04
17	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	3.42E-04
18	GO:0010275: NAD(P)H dehydrogenase complex assembly	3.42E-04
19	GO:0048255: mRNA stabilization	3.42E-04
20	GO:0006435: threonyl-tRNA aminoacylation	3.42E-04
21	GO:0001578: microtubule bundle formation	5.61E-04
22	GO:0045493: xylan catabolic process	5.61E-04
23	GO:0006013: mannose metabolic process	5.61E-04
24	GO:0071705: nitrogen compound transport	5.61E-04
25	GO:0009800: cinnamic acid biosynthetic process	8.03E-04
26	GO:0010306: rhamnogalacturonan II biosynthetic process	8.03E-04
27	GO:0010255: glucose mediated signaling pathway	8.03E-04
28	GO:0006168: adenine salvage	8.03E-04
29	GO:0006166: purine ribonucleoside salvage	8.03E-04
30	GO:0015846: polyamine transport	1.06E-03
31	GO:0051322: anaphase	1.06E-03
32	GO:0071249: cellular response to nitrate	1.06E-03
33	GO:0007020: microtubule nucleation	1.06E-03
34	GO:0048868: pollen tube development	1.07E-03
35	GO:0046785: microtubule polymerization	1.35E-03
36	GO:0044209: AMP salvage	1.35E-03
37	GO:0006465: signal peptide processing	1.35E-03
38	GO:0010190: cytochrome b6f complex assembly	1.65E-03
39	GO:0048827: phyllome development	1.65E-03
40	GO:0042549: photosystem II stabilization	1.65E-03
41	GO:0010315: auxin efflux	1.65E-03
42	GO:0006559: L-phenylalanine catabolic process	1.65E-03
43	GO:0009911: positive regulation of flower development	1.88E-03
44	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.98E-03
45	GO:0034389: lipid particle organization	1.98E-03
46	GO:0006401: RNA catabolic process	2.33E-03
47	GO:0009610: response to symbiotic fungus	2.33E-03
48	GO:0048528: post-embryonic root development	2.33E-03
49	GO:0030091: protein repair	2.70E-03
50	GO:0009704: de-etiolation	2.70E-03
51	GO:0006353: DNA-templated transcription, termination	2.70E-03
52	GO:0007389: pattern specification process	3.08E-03
53	GO:0044030: regulation of DNA methylation	3.08E-03
54	GO:0017004: cytochrome complex assembly	3.08E-03
55	GO:0006002: fructose 6-phosphate metabolic process	3.08E-03
56	GO:0022900: electron transport chain	3.08E-03
57	GO:0090305: nucleic acid phosphodiester bond hydrolysis	3.49E-03
58	GO:0019432: triglyceride biosynthetic process	3.49E-03
59	GO:0008202: steroid metabolic process	3.91E-03
60	GO:0010380: regulation of chlorophyll biosynthetic process	3.91E-03
61	GO:0051707: response to other organism	3.98E-03
62	GO:0080167: response to karrikin	4.79E-03
63	GO:0009750: response to fructose	4.80E-03
64	GO:0006415: translational termination	4.80E-03
65	GO:0015706: nitrate transport	5.27E-03
66	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.27E-03
67	GO:0010229: inflorescence development	5.75E-03
68	GO:0010540: basipetal auxin transport	6.25E-03
69	GO:0080188: RNA-directed DNA methylation	6.77E-03
70	GO:0010167: response to nitrate	6.77E-03
71	GO:0009740: gibberellic acid mediated signaling pathway	7.17E-03
72	GO:0006863: purine nucleobase transport	7.30E-03
73	GO:0006071: glycerol metabolic process	7.30E-03
74	GO:0000162: tryptophan biosynthetic process	7.30E-03
75	GO:0006289: nucleotide-excision repair	7.84E-03
76	GO:0010187: negative regulation of seed germination	7.84E-03
77	GO:0010073: meristem maintenance	8.40E-03
78	GO:0043622: cortical microtubule organization	8.40E-03
79	GO:0009814: defense response, incompatible interaction	9.56E-03
80	GO:0016226: iron-sulfur cluster assembly	9.56E-03
81	GO:0080092: regulation of pollen tube growth	9.56E-03
82	GO:0009693: ethylene biosynthetic process	1.02E-02
83	GO:0010584: pollen exine formation	1.08E-02
84	GO:0010268: brassinosteroid homeostasis	1.27E-02
85	GO:0007623: circadian rhythm	1.32E-02
86	GO:0048825: cotyledon development	1.41E-02
87	GO:0009749: response to glucose	1.41E-02
88	GO:0009851: auxin biosynthetic process	1.41E-02
89	GO:0016132: brassinosteroid biosynthetic process	1.47E-02
90	GO:0002229: defense response to oomycetes	1.47E-02
91	GO:0009739: response to gibberellin	1.48E-02
92	GO:0010468: regulation of gene expression	1.58E-02
93	GO:0071281: cellular response to iron ion	1.62E-02
94	GO:0009416: response to light stimulus	1.63E-02
95	GO:0016125: sterol metabolic process	1.69E-02
96	GO:0010252: auxin homeostasis	1.69E-02
97	GO:0000910: cytokinesis	1.84E-02
98	GO:0016126: sterol biosynthetic process	1.92E-02
99	GO:0009826: unidimensional cell growth	1.97E-02
100	GO:0009658: chloroplast organization	2.05E-02
101	GO:0010411: xyloglucan metabolic process	2.15E-02
102	GO:0009860: pollen tube growth	2.20E-02
103	GO:0008219: cell death	2.31E-02
104	GO:0009723: response to ethylene	2.37E-02
105	GO:0009834: plant-type secondary cell wall biogenesis	2.48E-02
106	GO:0007568: aging	2.56E-02
107	GO:0009910: negative regulation of flower development	2.56E-02
108	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.63E-02
109	GO:0046777: protein autophosphorylation	2.71E-02
110	GO:0009853: photorespiration	2.74E-02
111	GO:0006839: mitochondrial transport	3.00E-02
112	GO:0008283: cell proliferation	3.28E-02
113	GO:0009926: auxin polar transport	3.28E-02
114	GO:0009744: response to sucrose	3.28E-02
115	GO:0071555: cell wall organization	3.93E-02
116	GO:0006364: rRNA processing	4.05E-02
117	GO:0006813: potassium ion transport	4.05E-02
118	GO:0010224: response to UV-B	4.15E-02
119	GO:0006417: regulation of translation	4.36E-02
120	GO:0006096: glycolytic process	4.56E-02
121	GO:0043086: negative regulation of catalytic activity	4.56E-02
122	GO:0009873: ethylene-activated signaling pathway	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
2	GO:0019808: polyamine binding	0.00E+00
3	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
4	GO:0008859: exoribonuclease II activity	0.00E+00
5	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
6	GO:0017091: AU-rich element binding	1.50E-04
7	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	1.50E-04
8	GO:0005290: L-histidine transmembrane transporter activity	1.50E-04
9	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	3.42E-04
10	GO:0004829: threonine-tRNA ligase activity	3.42E-04
11	GO:0004047: aminomethyltransferase activity	3.42E-04
12	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	3.42E-04
13	GO:0000064: L-ornithine transmembrane transporter activity	3.42E-04
14	GO:0032549: ribonucleoside binding	5.61E-04
15	GO:0016805: dipeptidase activity	5.61E-04
16	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	5.61E-04
17	GO:0045548: phenylalanine ammonia-lyase activity	5.61E-04
18	GO:0003999: adenine phosphoribosyltransferase activity	8.03E-04
19	GO:0015189: L-lysine transmembrane transporter activity	8.03E-04
20	GO:0000254: C-4 methylsterol oxidase activity	8.03E-04
21	GO:0015181: arginine transmembrane transporter activity	8.03E-04
22	GO:0070628: proteasome binding	1.06E-03
23	GO:0009044: xylan 1,4-beta-xylosidase activity	1.06E-03
24	GO:0046556: alpha-L-arabinofuranosidase activity	1.06E-03
25	GO:0010385: double-stranded methylated DNA binding	1.06E-03
26	GO:0004672: protein kinase activity	1.53E-03
27	GO:0031593: polyubiquitin binding	1.65E-03
28	GO:0003730: mRNA 3'-UTR binding	1.98E-03
29	GO:0004144: diacylglycerol O-acyltransferase activity	1.98E-03
30	GO:0004559: alpha-mannosidase activity	1.98E-03
31	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.98E-03
32	GO:0046872: metal ion binding	2.25E-03
33	GO:0019899: enzyme binding	2.33E-03
34	GO:0003872: 6-phosphofructokinase activity	2.33E-03
35	GO:0008142: oxysterol binding	3.08E-03
36	GO:0003747: translation release factor activity	3.49E-03
37	GO:0009672: auxin:proton symporter activity	3.91E-03
38	GO:0051537: 2 iron, 2 sulfur cluster binding	4.30E-03
39	GO:0015020: glucuronosyltransferase activity	4.35E-03
40	GO:0005089: Rho guanyl-nucleotide exchange factor activity	4.80E-03
41	GO:0008327: methyl-CpG binding	4.80E-03
42	GO:0001054: RNA polymerase I activity	4.80E-03
43	GO:0000175: 3'-5'-exoribonuclease activity	5.75E-03
44	GO:0010329: auxin efflux transmembrane transporter activity	5.75E-03
45	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.25E-03
46	GO:0004857: enzyme inhibitor activity	7.84E-03
47	GO:0043130: ubiquitin binding	7.84E-03
48	GO:0008324: cation transmembrane transporter activity	8.40E-03
49	GO:0005345: purine nucleobase transmembrane transporter activity	8.40E-03
50	GO:0004176: ATP-dependent peptidase activity	8.97E-03
51	GO:0004540: ribonuclease activity	8.97E-03
52	GO:0030570: pectate lyase activity	1.02E-02
53	GO:0004402: histone acetyltransferase activity	1.20E-02
54	GO:0001085: RNA polymerase II transcription factor binding	1.27E-02
55	GO:0019901: protein kinase binding	1.41E-02
56	GO:0016301: kinase activity	1.46E-02
57	GO:0004518: nuclease activity	1.55E-02
58	GO:0003684: damaged DNA binding	1.69E-02
59	GO:0008237: metallopeptidase activity	1.76E-02
60	GO:0004721: phosphoprotein phosphatase activity	2.15E-02
61	GO:0004806: triglyceride lipase activity	2.15E-02
62	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.48E-02
63	GO:0004222: metalloendopeptidase activity	2.48E-02
64	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.56E-02
65	GO:0003993: acid phosphatase activity	2.83E-02
66	GO:0042393: histone binding	3.00E-02
67	GO:0004871: signal transducer activity	3.18E-02
68	GO:0003676: nucleic acid binding	3.25E-02
69	GO:0004722: protein serine/threonine phosphatase activity	3.33E-02
70	GO:0043621: protein self-association	3.47E-02
71	GO:0035091: phosphatidylinositol binding	3.47E-02
72	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.05E-02
73	GO:0004674: protein serine/threonine kinase activity	4.36E-02
74	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.88E-02
75	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.88E-02
76	GO:0022857: transmembrane transporter activity	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0009507: chloroplast	8.48E-05
3	GO:0010370: perinucleolar chromocenter	1.50E-04
4	GO:0009505: plant-type cell wall	1.12E-03
5	GO:0000178: exosome (RNase complex)	1.35E-03
6	GO:0055035: plastid thylakoid membrane	1.35E-03
7	GO:0072686: mitotic spindle	1.35E-03
8	GO:0005945: 6-phosphofructokinase complex	1.35E-03
9	GO:0010005: cortical microtubule, transverse to long axis	1.98E-03
10	GO:0005811: lipid particle	3.08E-03
11	GO:0005720: nuclear heterochromatin	3.49E-03
12	GO:0005736: DNA-directed RNA polymerase I complex	3.49E-03
13	GO:0055028: cortical microtubule	4.35E-03
14	GO:0016324: apical plasma membrane	4.35E-03
15	GO:0009574: preprophase band	5.75E-03
16	GO:0005938: cell cortex	5.75E-03
17	GO:0005802: trans-Golgi network	7.64E-03
18	GO:0045271: respiratory chain complex I	8.40E-03
19	GO:0005768: endosome	9.28E-03
20	GO:0005770: late endosome	1.27E-02
21	GO:0046658: anchored component of plasma membrane	1.75E-02
22	GO:0000932: P-body	1.92E-02
23	GO:0005667: transcription factor complex	2.07E-02
24	GO:0009707: chloroplast outer membrane	2.31E-02
25	GO:0009570: chloroplast stroma	2.79E-02
26	GO:0031225: anchored component of membrane	2.85E-02
27	GO:0005819: spindle	2.91E-02
28	GO:0031966: mitochondrial membrane	3.85E-02
29	GO:0005747: mitochondrial respiratory chain complex I	4.67E-02