Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G30640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019481: L-alanine catabolic process, by transamination0.00E+00
2GO:0034975: protein folding in endoplasmic reticulum3.25E-05
3GO:0045857: negative regulation of molecular function, epigenetic3.25E-05
4GO:0006486: protein glycosylation4.10E-05
5GO:0043066: negative regulation of apoptotic process8.18E-05
6GO:0080185: effector dependent induction by symbiont of host immune response8.18E-05
7GO:0009958: positive gravitropism1.45E-04
8GO:0042823: pyridoxal phosphate biosynthetic process2.11E-04
9GO:0006865: amino acid transport4.22E-04
10GO:0048827: phyllome development4.48E-04
11GO:0010016: shoot system morphogenesis5.36E-04
12GO:0009648: photoperiodism5.36E-04
13GO:0045814: negative regulation of gene expression, epigenetic5.36E-04
14GO:0030162: regulation of proteolysis7.22E-04
15GO:0006491: N-glycan processing7.22E-04
16GO:1900150: regulation of defense response to fungus7.22E-04
17GO:0048766: root hair initiation7.22E-04
18GO:0010112: regulation of systemic acquired resistance9.20E-04
19GO:0018105: peptidyl-serine phosphorylation1.08E-03
20GO:0010048: vernalization response1.13E-03
21GO:0006325: chromatin organization1.13E-03
22GO:0035556: intracellular signal transduction1.33E-03
23GO:0016925: protein sumoylation1.36E-03
24GO:0007034: vacuolar transport1.60E-03
25GO:0007030: Golgi organization1.72E-03
26GO:0009825: multidimensional cell growth1.72E-03
27GO:0006487: protein N-linked glycosylation1.99E-03
28GO:0003333: amino acid transmembrane transport2.26E-03
29GO:0048278: vesicle docking2.26E-03
30GO:2000022: regulation of jasmonic acid mediated signaling pathway2.40E-03
31GO:0009306: protein secretion2.69E-03
32GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.84E-03
33GO:0006342: chromatin silencing3.15E-03
34GO:0061025: membrane fusion3.31E-03
35GO:0080167: response to karrikin3.36E-03
36GO:0048825: cotyledon development3.47E-03
37GO:0046777: protein autophosphorylation3.59E-03
38GO:0006464: cellular protein modification process4.14E-03
39GO:0001666: response to hypoxia4.67E-03
40GO:0009816: defense response to bacterium, incompatible interaction4.85E-03
41GO:0009751: response to salicylic acid4.87E-03
42GO:0009627: systemic acquired resistance5.04E-03
43GO:0006906: vesicle fusion5.04E-03
44GO:0048573: photoperiodism, flowering5.22E-03
45GO:0009817: defense response to fungus, incompatible interaction5.60E-03
46GO:0048767: root hair elongation5.80E-03
47GO:0009910: negative regulation of flower development6.19E-03
48GO:0006839: mitochondrial transport7.22E-03
49GO:0006897: endocytosis7.43E-03
50GO:0007165: signal transduction7.65E-03
51GO:0009926: auxin polar transport7.87E-03
52GO:0008643: carbohydrate transport8.31E-03
53GO:0031347: regulation of defense response8.99E-03
54GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process8.99E-03
55GO:0009585: red, far-red light phototransduction9.69E-03
56GO:0010224: response to UV-B9.93E-03
57GO:0016569: covalent chromatin modification1.19E-02
58GO:0042742: defense response to bacterium1.78E-02
59GO:0030154: cell differentiation1.94E-02
60GO:0009739: response to gibberellin1.98E-02
61GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.98E-02
62GO:0009733: response to auxin2.00E-02
63GO:0006470: protein dephosphorylation2.01E-02
64GO:0006952: defense response2.64E-02
65GO:0009723: response to ethylene2.77E-02
66GO:0006351: transcription, DNA-templated3.19E-02
67GO:0045892: negative regulation of transcription, DNA-templated3.34E-02
68GO:0006886: intracellular protein transport3.38E-02
69GO:0007275: multicellular organism development3.50E-02
70GO:0048364: root development3.96E-02
71GO:0006468: protein phosphorylation3.99E-02
72GO:0009753: response to jasmonic acid4.04E-02
73GO:0009873: ethylene-activated signaling pathway4.60E-02
74GO:0006357: regulation of transcription from RNA polymerase II promoter4.69E-02
75GO:0009734: auxin-activated signaling pathway4.90E-02
RankGO TermAdjusted P value
1GO:0008092: cytoskeletal protein binding0.00E+00
2GO:1901149: salicylic acid binding3.25E-05
3GO:0008378: galactosyltransferase activity3.36E-05
4GO:0019948: SUMO activating enzyme activity1.42E-04
5GO:0003935: GTP cyclohydrolase II activity1.42E-04
6GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity2.11E-04
7GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity2.11E-04
8GO:0009931: calcium-dependent protein serine/threonine kinase activity2.99E-04
9GO:0004683: calmodulin-dependent protein kinase activity3.15E-04
10GO:0005509: calcium ion binding4.37E-04
11GO:0004559: alpha-mannosidase activity5.36E-04
12GO:0035064: methylated histone binding7.22E-04
13GO:0015171: amino acid transmembrane transporter activity8.28E-04
14GO:0005543: phospholipid binding1.24E-03
15GO:0016758: transferase activity, transferring hexosyl groups1.26E-03
16GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.60E-03
17GO:0003756: protein disulfide isomerase activity2.69E-03
18GO:0008514: organic anion transmembrane transporter activity2.69E-03
19GO:0005102: receptor binding2.84E-03
20GO:0005515: protein binding3.20E-03
21GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.97E-03
22GO:0000149: SNARE binding7.01E-03
23GO:0005484: SNAP receptor activity7.87E-03
24GO:0031625: ubiquitin protein ligase binding1.04E-02
25GO:0015035: protein disulfide oxidoreductase activity1.27E-02
26GO:0005516: calmodulin binding1.32E-02
27GO:0003677: DNA binding1.57E-02
28GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.60E-02
29GO:0003824: catalytic activity1.95E-02
30GO:0046982: protein heterodimerization activity2.46E-02
31GO:0004672: protein kinase activity2.62E-02
32GO:0043531: ADP binding2.67E-02
33GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.31E-02
34GO:0016301: kinase activity3.44E-02
35GO:0004722: protein serine/threonine phosphatase activity3.53E-02
36GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.57E-02
RankGO TermAdjusted P value
1GO:0000791: euchromatin3.25E-05
2GO:0030140: trans-Golgi network transport vesicle4.48E-04
3GO:0009986: cell surface6.27E-04
4GO:0000139: Golgi membrane7.83E-04
5GO:0005720: nuclear heterochromatin9.20E-04
6GO:0005794: Golgi apparatus1.01E-03
7GO:0005905: clathrin-coated pit2.26E-03
8GO:0030136: clathrin-coated vesicle2.84E-03
9GO:0019005: SCF ubiquitin ligase complex5.60E-03
10GO:0031201: SNARE complex7.43E-03
11GO:0005856: cytoskeleton8.53E-03
12GO:0005802: trans-Golgi network1.41E-02
13GO:0005615: extracellular space1.98E-02
14GO:0046658: anchored component of plasma membrane2.23E-02
15GO:0005789: endoplasmic reticulum membrane2.72E-02
16GO:0005783: endoplasmic reticulum3.52E-02
17GO:0005743: mitochondrial inner membrane3.65E-02
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Gene type



Gene DE type