co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G30490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
2	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
3	GO:0032515: negative regulation of phosphoprotein phosphatase activity	0.00E+00
4	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
5	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
6	GO:0006983: ER overload response	0.00E+00
7	GO:0009863: salicylic acid mediated signaling pathway	4.31E-05
8	GO:0031930: mitochondria-nucleus signaling pathway	9.36E-05
9	GO:0006562: proline catabolic process	1.95E-04
10	GO:0032469: endoplasmic reticulum calcium ion homeostasis	1.95E-04
11	GO:0032491: detection of molecule of fungal origin	1.95E-04
12	GO:1902066: regulation of cell wall pectin metabolic process	4.38E-04
13	GO:0002240: response to molecule of oomycetes origin	4.38E-04
14	GO:0031349: positive regulation of defense response	4.38E-04
15	GO:0045732: positive regulation of protein catabolic process	4.38E-04
16	GO:0009727: detection of ethylene stimulus	4.38E-04
17	GO:0043066: negative regulation of apoptotic process	4.38E-04
18	GO:0015865: purine nucleotide transport	4.38E-04
19	GO:0019725: cellular homeostasis	4.38E-04
20	GO:0080183: response to photooxidative stress	4.38E-04
21	GO:0010155: regulation of proton transport	4.38E-04
22	GO:0010133: proline catabolic process to glutamate	4.38E-04
23	GO:0006626: protein targeting to mitochondrion	5.09E-04
24	GO:0009266: response to temperature stimulus	5.74E-04
25	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	7.14E-04
26	GO:0010498: proteasomal protein catabolic process	7.14E-04
27	GO:1901672: positive regulation of systemic acquired resistance	7.14E-04
28	GO:0048586: regulation of long-day photoperiodism, flowering	7.14E-04
29	GO:0032922: circadian regulation of gene expression	7.14E-04
30	GO:0061158: 3'-UTR-mediated mRNA destabilization	7.14E-04
31	GO:0045836: positive regulation of meiotic nuclear division	7.14E-04
32	GO:0015783: GDP-fucose transport	7.14E-04
33	GO:0046902: regulation of mitochondrial membrane permeability	1.02E-03
34	GO:0010104: regulation of ethylene-activated signaling pathway	1.02E-03
35	GO:0072583: clathrin-dependent endocytosis	1.02E-03
36	GO:0006537: glutamate biosynthetic process	1.02E-03
37	GO:0010731: protein glutathionylation	1.02E-03
38	GO:0006986: response to unfolded protein	1.02E-03
39	GO:0045227: capsule polysaccharide biosynthetic process	1.35E-03
40	GO:0033358: UDP-L-arabinose biosynthetic process	1.35E-03
41	GO:0080037: negative regulation of cytokinin-activated signaling pathway	1.35E-03
42	GO:0009414: response to water deprivation	1.43E-03
43	GO:0009738: abscisic acid-activated signaling pathway	1.50E-03
44	GO:0010200: response to chitin	1.60E-03
45	GO:0016192: vesicle-mediated transport	1.65E-03
46	GO:0018344: protein geranylgeranylation	1.72E-03
47	GO:0009247: glycolipid biosynthetic process	1.72E-03
48	GO:0045927: positive regulation of growth	1.72E-03
49	GO:2000762: regulation of phenylpropanoid metabolic process	1.72E-03
50	GO:0009737: response to abscisic acid	2.11E-03
51	GO:0045962: positive regulation of development, heterochronic	2.12E-03
52	GO:0045040: protein import into mitochondrial outer membrane	2.12E-03
53	GO:0002238: response to molecule of fungal origin	2.12E-03
54	GO:0001731: formation of translation preinitiation complex	2.12E-03
55	GO:0055085: transmembrane transport	2.42E-03
56	GO:0009423: chorismate biosynthetic process	2.54E-03
57	GO:0045926: negative regulation of growth	2.54E-03
58	GO:0046470: phosphatidylcholine metabolic process	3.00E-03
59	GO:1900057: positive regulation of leaf senescence	3.00E-03
60	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.47E-03
61	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.47E-03
62	GO:0030162: regulation of proteolysis	3.47E-03
63	GO:0006491: N-glycan processing	3.47E-03
64	GO:0019375: galactolipid biosynthetic process	3.47E-03
65	GO:0045010: actin nucleation	3.47E-03
66	GO:0031540: regulation of anthocyanin biosynthetic process	3.47E-03
67	GO:0006499: N-terminal protein myristoylation	3.89E-03
68	GO:0009932: cell tip growth	3.97E-03
69	GO:0010204: defense response signaling pathway, resistance gene-independent	3.97E-03
70	GO:0030968: endoplasmic reticulum unfolded protein response	3.97E-03
71	GO:0006470: protein dephosphorylation	3.98E-03
72	GO:0010112: regulation of systemic acquired resistance	4.49E-03
73	GO:0015780: nucleotide-sugar transport	4.49E-03
74	GO:0048268: clathrin coat assembly	5.04E-03
75	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.04E-03
76	GO:0006897: endocytosis	5.31E-03
77	GO:0043069: negative regulation of programmed cell death	5.61E-03
78	GO:0000038: very long-chain fatty acid metabolic process	6.20E-03
79	GO:0009089: lysine biosynthetic process via diaminopimelate	6.20E-03
80	GO:0009073: aromatic amino acid family biosynthetic process	6.20E-03
81	GO:0045037: protein import into chloroplast stroma	6.81E-03
82	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	6.97E-03
83	GO:0006829: zinc II ion transport	7.44E-03
84	GO:0018107: peptidyl-threonine phosphorylation	7.44E-03
85	GO:0055046: microgametogenesis	7.44E-03
86	GO:0006486: protein glycosylation	7.75E-03
87	GO:0002237: response to molecule of bacterial origin	8.10E-03
88	GO:0007034: vacuolar transport	8.10E-03
89	GO:0006446: regulation of translational initiation	8.10E-03
90	GO:0009225: nucleotide-sugar metabolic process	8.77E-03
91	GO:0009901: anther dehiscence	8.77E-03
92	GO:0046688: response to copper ion	8.77E-03
93	GO:0034976: response to endoplasmic reticulum stress	9.46E-03
94	GO:0030150: protein import into mitochondrial matrix	1.02E-02
95	GO:0045333: cellular respiration	1.02E-02
96	GO:0080147: root hair cell development	1.02E-02
97	GO:0006487: protein N-linked glycosylation	1.02E-02
98	GO:0006825: copper ion transport	1.09E-02
99	GO:0018105: peptidyl-serine phosphorylation	1.14E-02
100	GO:0051321: meiotic cell cycle	1.17E-02
101	GO:0009751: response to salicylic acid	1.24E-02
102	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.24E-02
103	GO:0031348: negative regulation of defense response	1.24E-02
104	GO:0071456: cellular response to hypoxia	1.24E-02
105	GO:0009408: response to heat	1.26E-02
106	GO:0071369: cellular response to ethylene stimulus	1.32E-02
107	GO:0006012: galactose metabolic process	1.32E-02
108	GO:0010584: pollen exine formation	1.40E-02
109	GO:0009561: megagametogenesis	1.40E-02
110	GO:0009306: protein secretion	1.40E-02
111	GO:0009845: seed germination	1.50E-02
112	GO:0048544: recognition of pollen	1.74E-02
113	GO:0042742: defense response to bacterium	1.91E-02
114	GO:0007264: small GTPase mediated signal transduction	2.01E-02
115	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.15E-02
116	GO:0009617: response to bacterium	2.29E-02
117	GO:0006904: vesicle docking involved in exocytosis	2.30E-02
118	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.60E-02
119	GO:0010029: regulation of seed germination	2.60E-02
120	GO:0006906: vesicle fusion	2.70E-02
121	GO:0015031: protein transport	2.73E-02
122	GO:0006970: response to osmotic stress	3.20E-02
123	GO:0006468: protein phosphorylation	3.27E-02
124	GO:0009631: cold acclimation	3.34E-02
125	GO:0010043: response to zinc ion	3.34E-02
126	GO:0048366: leaf development	3.49E-02
127	GO:0009867: jasmonic acid mediated signaling pathway	3.57E-02
128	GO:0006839: mitochondrial transport	3.92E-02
129	GO:0006887: exocytosis	4.03E-02
130	GO:0006952: defense response	4.09E-02
131	GO:0051707: response to other organism	4.27E-02
132	GO:0045454: cell redox homeostasis	4.39E-02
133	GO:0000209: protein polyubiquitination	4.40E-02
134	GO:0008643: carbohydrate transport	4.52E-02
135	GO:0009965: leaf morphogenesis	4.64E-02
136	GO:0006855: drug transmembrane transport	4.77E-02
137	GO:0031347: regulation of defense response	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
2	GO:0005522: profilin binding	0.00E+00
3	GO:0004865: protein serine/threonine phosphatase inhibitor activity	0.00E+00
4	GO:0004107: chorismate synthase activity	0.00E+00
5	GO:0005212: structural constituent of eye lens	0.00E+00
6	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
7	GO:0032050: clathrin heavy chain binding	1.95E-04
8	GO:0004662: CAAX-protein geranylgeranyltransferase activity	1.95E-04
9	GO:0004657: proline dehydrogenase activity	1.95E-04
10	GO:0046481: digalactosyldiacylglycerol synthase activity	1.95E-04
11	GO:0010285: L,L-diaminopimelate aminotransferase activity	1.95E-04
12	GO:0005509: calcium ion binding	3.30E-04
13	GO:0015036: disulfide oxidoreductase activity	4.38E-04
14	GO:0016531: copper chaperone activity	7.14E-04
15	GO:0005457: GDP-fucose transmembrane transporter activity	7.14E-04
16	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	1.02E-03
17	GO:0035250: UDP-galactosyltransferase activity	1.02E-03
18	GO:0009916: alternative oxidase activity	1.35E-03
19	GO:0050373: UDP-arabinose 4-epimerase activity	1.35E-03
20	GO:0004040: amidase activity	1.72E-03
21	GO:0005471: ATP:ADP antiporter activity	1.72E-03
22	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.72E-03
23	GO:0004722: protein serine/threonine phosphatase activity	2.31E-03
24	GO:0003978: UDP-glucose 4-epimerase activity	2.54E-03
25	GO:0003730: mRNA 3'-UTR binding	2.54E-03
26	GO:0004656: procollagen-proline 4-dioxygenase activity	2.54E-03
27	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.54E-03
28	GO:0004559: alpha-mannosidase activity	2.54E-03
29	GO:0004525: ribonuclease III activity	3.47E-03
30	GO:0004630: phospholipase D activity	3.97E-03
31	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.97E-03
32	GO:0005545: 1-phosphatidylinositol binding	5.61E-03
33	GO:0004713: protein tyrosine kinase activity	5.61E-03
34	GO:0005543: phospholipid binding	6.20E-03
35	GO:0008559: xenobiotic-transporting ATPase activity	6.20E-03
36	GO:0008378: galactosyltransferase activity	6.81E-03
37	GO:0015198: oligopeptide transporter activity	6.81E-03
38	GO:0015266: protein channel activity	7.44E-03
39	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.44E-03
40	GO:0005262: calcium channel activity	7.44E-03
41	GO:0016301: kinase activity	7.59E-03
42	GO:0031625: ubiquitin protein ligase binding	8.59E-03
43	GO:0031418: L-ascorbic acid binding	1.02E-02
44	GO:0051087: chaperone binding	1.09E-02
45	GO:0008324: cation transmembrane transporter activity	1.09E-02
46	GO:0015035: protein disulfide oxidoreductase activity	1.14E-02
47	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.55E-02
48	GO:0030276: clathrin binding	1.65E-02
49	GO:0046873: metal ion transmembrane transporter activity	1.65E-02
50	GO:0010181: FMN binding	1.74E-02
51	GO:0015297: antiporter activity	1.83E-02
52	GO:0051015: actin filament binding	2.11E-02
53	GO:0005215: transporter activity	2.22E-02
54	GO:0008483: transaminase activity	2.30E-02
55	GO:0003676: nucleic acid binding	2.36E-02
56	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.44E-02
57	GO:0008375: acetylglucosaminyltransferase activity	2.70E-02
58	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.70E-02
59	GO:0004683: calmodulin-dependent protein kinase activity	2.80E-02
60	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.91E-02
61	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.02E-02
62	GO:0015238: drug transmembrane transporter activity	3.12E-02
63	GO:0046872: metal ion binding	3.23E-02
64	GO:0004674: protein serine/threonine kinase activity	3.30E-02
65	GO:0043565: sequence-specific DNA binding	3.53E-02
66	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.57E-02
67	GO:0000149: SNARE binding	3.80E-02
68	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.80E-02
69	GO:0005484: SNAP receptor activity	4.27E-02
70	GO:0051537: 2 iron, 2 sulfur cluster binding	4.52E-02
71	GO:0005198: structural molecule activity	4.64E-02

Rank	GO Term	Adjusted P value
1	GO:0005911: cell-cell junction	1.95E-04
2	GO:0005953: CAAX-protein geranylgeranyltransferase complex	1.95E-04
3	GO:0005886: plasma membrane	4.02E-04
4	GO:0031314: extrinsic component of mitochondrial inner membrane	4.38E-04
5	GO:0030139: endocytic vesicle	7.14E-04
6	GO:0005635: nuclear envelope	1.18E-03
7	GO:0000164: protein phosphatase type 1 complex	1.72E-03
8	GO:0016282: eukaryotic 43S preinitiation complex	2.12E-03
9	GO:0005654: nucleoplasm	2.16E-03
10	GO:0005743: mitochondrial inner membrane	2.47E-03
11	GO:0033290: eukaryotic 48S preinitiation complex	2.54E-03
12	GO:0016021: integral component of membrane	3.79E-03
13	GO:0005742: mitochondrial outer membrane translocase complex	3.97E-03
14	GO:0005783: endoplasmic reticulum	4.22E-03
15	GO:0005740: mitochondrial envelope	5.61E-03
16	GO:0030125: clathrin vesicle coat	5.61E-03
17	GO:0048471: perinuclear region of cytoplasm	6.20E-03
18	GO:0031307: integral component of mitochondrial outer membrane	6.81E-03
19	GO:0030176: integral component of endoplasmic reticulum membrane	8.77E-03
20	GO:0005795: Golgi stack	8.77E-03
21	GO:0005794: Golgi apparatus	9.12E-03
22	GO:0000139: Golgi membrane	9.28E-03
23	GO:0005758: mitochondrial intermembrane space	1.02E-02
24	GO:0070469: respiratory chain	1.09E-02
25	GO:0005789: endoplasmic reticulum membrane	1.14E-02
26	GO:0005905: clathrin-coated pit	1.17E-02
27	GO:0016020: membrane	1.43E-02
28	GO:0030136: clathrin-coated vesicle	1.48E-02
29	GO:0071944: cell periphery	2.11E-02
30	GO:0032580: Golgi cisterna membrane	2.20E-02
31	GO:0019005: SCF ubiquitin ligase complex	3.02E-02
32	GO:0009707: chloroplast outer membrane	3.02E-02
33	GO:0000325: plant-type vacuole	3.34E-02
34	GO:0031201: SNARE complex	4.03E-02
35	GO:0031902: late endosome membrane	4.03E-02
36	GO:0005856: cytoskeleton	4.64E-02