GO Enrichment Analysis of Co-expressed Genes with
AT4G30230
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070070: proton-transporting V-type ATPase complex assembly | 0.00E+00 |
| 2 | GO:0036258: multivesicular body assembly | 0.00E+00 |
| 3 | GO:0046680: response to DDT | 0.00E+00 |
| 4 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.18E-08 |
| 5 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.23E-05 |
| 6 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.48E-05 |
| 7 | GO:0035494: SNARE complex disassembly | 7.75E-05 |
| 8 | GO:0000032: cell wall mannoprotein biosynthetic process | 7.75E-05 |
| 9 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 7.75E-05 |
| 10 | GO:0010372: positive regulation of gibberellin biosynthetic process | 1.85E-04 |
| 11 | GO:0006096: glycolytic process | 2.69E-04 |
| 12 | GO:0046686: response to cadmium ion | 2.74E-04 |
| 13 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.05E-04 |
| 14 | GO:0006517: protein deglycosylation | 3.11E-04 |
| 15 | GO:0033591: response to L-ascorbic acid | 3.11E-04 |
| 16 | GO:0010498: proteasomal protein catabolic process | 3.11E-04 |
| 17 | GO:0070676: intralumenal vesicle formation | 4.49E-04 |
| 18 | GO:0009298: GDP-mannose biosynthetic process | 4.49E-04 |
| 19 | GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly | 4.49E-04 |
| 20 | GO:0010255: glucose mediated signaling pathway | 4.49E-04 |
| 21 | GO:0009646: response to absence of light | 4.90E-04 |
| 22 | GO:0010363: regulation of plant-type hypersensitive response | 5.98E-04 |
| 23 | GO:0030163: protein catabolic process | 6.36E-04 |
| 24 | GO:0006564: L-serine biosynthetic process | 7.57E-04 |
| 25 | GO:0006461: protein complex assembly | 7.57E-04 |
| 26 | GO:0009823: cytokinin catabolic process | 7.57E-04 |
| 27 | GO:0018279: protein N-linked glycosylation via asparagine | 7.57E-04 |
| 28 | GO:0015031: protein transport | 8.85E-04 |
| 29 | GO:0042176: regulation of protein catabolic process | 9.24E-04 |
| 30 | GO:0007035: vacuolar acidification | 9.24E-04 |
| 31 | GO:0010043: response to zinc ion | 1.18E-03 |
| 32 | GO:0009651: response to salt stress | 1.29E-03 |
| 33 | GO:0000338: protein deneddylation | 1.29E-03 |
| 34 | GO:0006491: N-glycan processing | 1.48E-03 |
| 35 | GO:0006402: mRNA catabolic process | 1.48E-03 |
| 36 | GO:0006972: hyperosmotic response | 1.69E-03 |
| 37 | GO:0046685: response to arsenic-containing substance | 1.91E-03 |
| 38 | GO:0006098: pentose-phosphate shunt | 1.91E-03 |
| 39 | GO:0043085: positive regulation of catalytic activity | 2.61E-03 |
| 40 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 2.86E-03 |
| 41 | GO:0006790: sulfur compound metabolic process | 2.86E-03 |
| 42 | GO:0006094: gluconeogenesis | 3.12E-03 |
| 43 | GO:0006807: nitrogen compound metabolic process | 3.12E-03 |
| 44 | GO:0034605: cellular response to heat | 3.38E-03 |
| 45 | GO:0046854: phosphatidylinositol phosphorylation | 3.66E-03 |
| 46 | GO:0019853: L-ascorbic acid biosynthetic process | 3.66E-03 |
| 47 | GO:0080092: regulation of pollen tube growth | 5.13E-03 |
| 48 | GO:0009306: protein secretion | 5.77E-03 |
| 49 | GO:0010089: xylem development | 5.77E-03 |
| 50 | GO:0009561: megagametogenesis | 5.77E-03 |
| 51 | GO:0042147: retrograde transport, endosome to Golgi | 6.10E-03 |
| 52 | GO:0051028: mRNA transport | 6.10E-03 |
| 53 | GO:0015991: ATP hydrolysis coupled proton transport | 6.44E-03 |
| 54 | GO:0006662: glycerol ether metabolic process | 6.78E-03 |
| 55 | GO:0008360: regulation of cell shape | 6.78E-03 |
| 56 | GO:0015986: ATP synthesis coupled proton transport | 7.13E-03 |
| 57 | GO:0061025: membrane fusion | 7.13E-03 |
| 58 | GO:0055072: iron ion homeostasis | 7.49E-03 |
| 59 | GO:0010183: pollen tube guidance | 7.49E-03 |
| 60 | GO:0031047: gene silencing by RNA | 8.22E-03 |
| 61 | GO:0006914: autophagy | 8.97E-03 |
| 62 | GO:0016579: protein deubiquitination | 9.75E-03 |
| 63 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.14E-02 |
| 64 | GO:0045454: cell redox homeostasis | 1.23E-02 |
| 65 | GO:0006886: intracellular protein transport | 1.27E-02 |
| 66 | GO:0010311: lateral root formation | 1.27E-02 |
| 67 | GO:0007568: aging | 1.36E-02 |
| 68 | GO:0016051: carbohydrate biosynthetic process | 1.45E-02 |
| 69 | GO:0034599: cellular response to oxidative stress | 1.49E-02 |
| 70 | GO:0006897: endocytosis | 1.64E-02 |
| 71 | GO:0009744: response to sucrose | 1.73E-02 |
| 72 | GO:0009640: photomorphogenesis | 1.73E-02 |
| 73 | GO:0009664: plant-type cell wall organization | 2.04E-02 |
| 74 | GO:0009809: lignin biosynthetic process | 2.14E-02 |
| 75 | GO:0006486: protein glycosylation | 2.14E-02 |
| 76 | GO:0009585: red, far-red light phototransduction | 2.14E-02 |
| 77 | GO:0009553: embryo sac development | 2.69E-02 |
| 78 | GO:0009555: pollen development | 2.71E-02 |
| 79 | GO:0018105: peptidyl-serine phosphorylation | 2.81E-02 |
| 80 | GO:0009058: biosynthetic process | 3.35E-02 |
| 81 | GO:0042744: hydrogen peroxide catabolic process | 3.54E-02 |
| 82 | GO:0009793: embryo development ending in seed dormancy | 3.64E-02 |
| 83 | GO:0007166: cell surface receptor signaling pathway | 4.47E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group | 0.00E+00 |
| 2 | GO:0004298: threonine-type endopeptidase activity | 7.92E-10 |
| 3 | GO:0036402: proteasome-activating ATPase activity | 1.48E-05 |
| 4 | GO:0008233: peptidase activity | 1.77E-05 |
| 5 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 5.85E-05 |
| 6 | GO:0030955: potassium ion binding | 7.35E-05 |
| 7 | GO:0004743: pyruvate kinase activity | 7.35E-05 |
| 8 | GO:0019786: Atg8-specific protease activity | 7.75E-05 |
| 9 | GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity | 7.75E-05 |
| 10 | GO:0004476: mannose-6-phosphate isomerase activity | 7.75E-05 |
| 11 | GO:0017025: TBP-class protein binding | 1.81E-04 |
| 12 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.85E-04 |
| 13 | GO:0019779: Atg8 activating enzyme activity | 1.85E-04 |
| 14 | GO:0005483: soluble NSF attachment protein activity | 3.11E-04 |
| 15 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 3.11E-04 |
| 16 | GO:0047134: protein-disulfide reductase activity | 3.92E-04 |
| 17 | GO:0004791: thioredoxin-disulfide reductase activity | 4.90E-04 |
| 18 | GO:0019776: Atg8 ligase activity | 5.98E-04 |
| 19 | GO:0019905: syntaxin binding | 5.98E-04 |
| 20 | GO:0019139: cytokinin dehydrogenase activity | 7.57E-04 |
| 21 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 7.57E-04 |
| 22 | GO:0004332: fructose-bisphosphate aldolase activity | 9.24E-04 |
| 23 | GO:0031593: polyubiquitin binding | 9.24E-04 |
| 24 | GO:0051117: ATPase binding | 9.24E-04 |
| 25 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 9.24E-04 |
| 26 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 9.24E-04 |
| 27 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.10E-03 |
| 28 | GO:0003950: NAD+ ADP-ribosyltransferase activity | 1.10E-03 |
| 29 | GO:0030234: enzyme regulator activity | 2.37E-03 |
| 30 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 2.37E-03 |
| 31 | GO:0008047: enzyme activator activity | 2.37E-03 |
| 32 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 2.61E-03 |
| 33 | GO:0008131: primary amine oxidase activity | 3.38E-03 |
| 34 | GO:0043130: ubiquitin binding | 4.23E-03 |
| 35 | GO:0016887: ATPase activity | 4.37E-03 |
| 36 | GO:0008565: protein transporter activity | 4.66E-03 |
| 37 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 4.82E-03 |
| 38 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 7.85E-03 |
| 39 | GO:0000287: magnesium ion binding | 8.15E-03 |
| 40 | GO:0004518: nuclease activity | 8.22E-03 |
| 41 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.59E-03 |
| 42 | GO:0008237: metallopeptidase activity | 9.36E-03 |
| 43 | GO:0016597: amino acid binding | 9.75E-03 |
| 44 | GO:0008375: acetylglucosaminyltransferase activity | 1.10E-02 |
| 45 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.36E-02 |
| 46 | GO:0003746: translation elongation factor activity | 1.45E-02 |
| 47 | GO:0035091: phosphatidylinositol binding | 1.83E-02 |
| 48 | GO:0005198: structural molecule activity | 1.88E-02 |
| 49 | GO:0051287: NAD binding | 1.98E-02 |
| 50 | GO:0003729: mRNA binding | 2.10E-02 |
| 51 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.14E-02 |
| 52 | GO:0000166: nucleotide binding | 2.71E-02 |
| 53 | GO:0015035: protein disulfide oxidoreductase activity | 2.81E-02 |
| 54 | GO:0008026: ATP-dependent helicase activity | 2.87E-02 |
| 55 | GO:0030170: pyridoxal phosphate binding | 3.48E-02 |
| 56 | GO:0005507: copper ion binding | 3.85E-02 |
| 57 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.86E-02 |
| 58 | GO:0005516: calmodulin binding | 4.07E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 3.02E-16 |
| 2 | GO:0005839: proteasome core complex | 7.92E-10 |
| 3 | GO:0005829: cytosol | 5.25E-07 |
| 4 | GO:0031597: cytosolic proteasome complex | 2.12E-05 |
| 5 | GO:0031595: nuclear proteasome complex | 2.90E-05 |
| 6 | GO:0005774: vacuolar membrane | 7.23E-05 |
| 7 | GO:0008540: proteasome regulatory particle, base subcomplex | 7.35E-05 |
| 8 | GO:0012510: trans-Golgi network transport vesicle membrane | 7.75E-05 |
| 9 | GO:0016442: RISC complex | 7.75E-05 |
| 10 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.04E-04 |
| 11 | GO:0005773: vacuole | 2.44E-04 |
| 12 | GO:0005775: vacuolar lumen | 4.49E-04 |
| 13 | GO:0005776: autophagosome | 5.98E-04 |
| 14 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 5.98E-04 |
| 15 | GO:0009506: plasmodesma | 7.57E-04 |
| 16 | GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain | 7.57E-04 |
| 17 | GO:0000813: ESCRT I complex | 7.57E-04 |
| 18 | GO:0008250: oligosaccharyltransferase complex | 7.57E-04 |
| 19 | GO:0030904: retromer complex | 9.24E-04 |
| 20 | GO:0000421: autophagosome membrane | 1.48E-03 |
| 21 | GO:0031902: late endosome membrane | 1.52E-03 |
| 22 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.69E-03 |
| 23 | GO:0010494: cytoplasmic stress granule | 1.91E-03 |
| 24 | GO:0008180: COP9 signalosome | 1.91E-03 |
| 25 | GO:0005635: nuclear envelope | 2.36E-03 |
| 26 | GO:0005740: mitochondrial envelope | 2.37E-03 |
| 27 | GO:0048471: perinuclear region of cytoplasm | 2.61E-03 |
| 28 | GO:0005665: DNA-directed RNA polymerase II, core complex | 2.86E-03 |
| 29 | GO:0005886: plasma membrane | 2.88E-03 |
| 30 | GO:0000419: DNA-directed RNA polymerase V complex | 3.94E-03 |
| 31 | GO:0005741: mitochondrial outer membrane | 4.82E-03 |
| 32 | GO:0031410: cytoplasmic vesicle | 5.13E-03 |
| 33 | GO:0005737: cytoplasm | 8.25E-03 |
| 34 | GO:0000932: P-body | 1.02E-02 |
| 35 | GO:0005643: nuclear pore | 1.22E-02 |
| 36 | GO:0000325: plant-type vacuole | 1.36E-02 |
| 37 | GO:0031201: SNARE complex | 1.64E-02 |
| 38 | GO:0005618: cell wall | 2.21E-02 |
| 39 | GO:0005834: heterotrimeric G-protein complex | 2.52E-02 |
| 40 | GO:0005623: cell | 3.29E-02 |
| 41 | GO:0005794: Golgi apparatus | 3.31E-02 |
| 42 | GO:0005634: nucleus | 3.65E-02 |
| 43 | GO:0005802: trans-Golgi network | 4.33E-02 |
| 44 | GO:0005768: endosome | 4.91E-02 |