GO Enrichment Analysis of Co-expressed Genes with
AT4G29960
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006231: dTMP biosynthetic process | 1.33E-05 |
| 2 | GO:0009257: 10-formyltetrahydrofolate biosynthetic process | 1.33E-05 |
| 3 | GO:0006545: glycine biosynthetic process | 5.40E-05 |
| 4 | GO:0000380: alternative mRNA splicing, via spliceosome | 7.14E-05 |
| 5 | GO:0009612: response to mechanical stimulus | 1.11E-04 |
| 6 | GO:0006002: fructose 6-phosphate metabolic process | 1.78E-04 |
| 7 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.05E-04 |
| 8 | GO:0006487: protein N-linked glycosylation | 4.48E-04 |
| 9 | GO:0000027: ribosomal large subunit assembly | 4.48E-04 |
| 10 | GO:0006730: one-carbon metabolic process | 5.39E-04 |
| 11 | GO:0030163: protein catabolic process | 8.71E-04 |
| 12 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.19E-03 |
| 13 | GO:0006839: mitochondrial transport | 1.53E-03 |
| 14 | GO:0009926: auxin polar transport | 1.66E-03 |
| 15 | GO:0006096: glycolytic process | 2.26E-03 |
| 16 | GO:0009553: embryo sac development | 2.51E-03 |
| 17 | GO:0006470: protein dephosphorylation | 4.06E-03 |
| 18 | GO:0032259: methylation | 7.35E-03 |
| 19 | GO:0016042: lipid catabolic process | 7.43E-03 |
| 20 | GO:0009738: abscisic acid-activated signaling pathway | 1.11E-02 |
| 21 | GO:0055085: transmembrane transport | 1.34E-02 |
| 22 | GO:0006457: protein folding | 1.36E-02 |
| 23 | GO:0006979: response to oxidative stress | 1.88E-02 |
| 24 | GO:0009733: response to auxin | 2.03E-02 |
| 25 | GO:0009409: response to cold | 2.32E-02 |
| 26 | GO:0006810: transport | 2.46E-02 |
| 27 | GO:0046686: response to cadmium ion | 2.57E-02 |
| 28 | GO:0009793: embryo development ending in seed dormancy | 3.40E-02 |
| 29 | GO:0009651: response to salt stress | 4.44E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004799: thymidylate synthase activity | 1.33E-05 |
| 2 | GO:0004146: dihydrofolate reductase activity | 1.33E-05 |
| 3 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 7.14E-05 |
| 4 | GO:0003872: 6-phosphofructokinase activity | 1.32E-04 |
| 5 | GO:0004722: protein serine/threonine phosphatase activity | 4.63E-04 |
| 6 | GO:0004298: threonine-type endopeptidase activity | 5.09E-04 |
| 7 | GO:0004540: ribonuclease activity | 5.09E-04 |
| 8 | GO:0016298: lipase activity | 2.07E-03 |
| 9 | GO:0051082: unfolded protein binding | 2.56E-03 |
| 10 | GO:0008233: peptidase activity | 5.72E-03 |
| 11 | GO:0052689: carboxylic ester hydrolase activity | 6.20E-03 |
| 12 | GO:0000166: nucleotide binding | 1.13E-02 |
| 13 | GO:0030246: carbohydrate binding | 1.40E-02 |
| 14 | GO:0005509: calcium ion binding | 1.76E-02 |
| 15 | GO:0016787: hydrolase activity | 3.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005838: proteasome regulatory particle | 2.46E-05 |
| 2 | GO:0000502: proteasome complex | 6.78E-05 |
| 3 | GO:0005945: 6-phosphofructokinase complex | 7.14E-05 |
| 4 | GO:0008250: oligosaccharyltransferase complex | 7.14E-05 |
| 5 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.78E-04 |
| 6 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.79E-04 |
| 7 | GO:0005839: proteasome core complex | 5.09E-04 |
| 8 | GO:0005774: vacuolar membrane | 7.36E-04 |
| 9 | GO:0005788: endoplasmic reticulum lumen | 1.05E-03 |
| 10 | GO:0005783: endoplasmic reticulum | 1.75E-03 |
| 11 | GO:0005789: endoplasmic reticulum membrane | 2.66E-03 |
| 12 | GO:0009543: chloroplast thylakoid lumen | 2.98E-03 |
| 13 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 5.32E-03 |
| 14 | GO:0005743: mitochondrial inner membrane | 7.20E-03 |
| 15 | GO:0022626: cytosolic ribosome | 1.10E-02 |
| 16 | GO:0005840: ribosome | 1.93E-02 |
| 17 | GO:0009505: plant-type cell wall | 2.20E-02 |
| 18 | GO:0005730: nucleolus | 2.72E-02 |
| 19 | GO:0048046: apoplast | 4.70E-02 |