Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G29310

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070455: positive regulation of heme biosynthetic process0.00E+00
2GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA0.00E+00
3GO:0045014: negative regulation of transcription by glucose0.00E+00
4GO:0000271: polysaccharide biosynthetic process4.28E-05
5GO:0045489: pectin biosynthetic process4.82E-05
6GO:0007186: G-protein coupled receptor signaling pathway9.94E-05
7GO:0010726: positive regulation of hydrogen peroxide metabolic process1.23E-04
8GO:0010070: zygote asymmetric cell division1.23E-04
9GO:0051013: microtubule severing1.23E-04
10GO:0045786: negative regulation of cell cycle1.23E-04
11GO:0016051: carbohydrate biosynthetic process2.37E-04
12GO:0010069: zygote asymmetric cytokinesis in embryo sac2.86E-04
13GO:0061062: regulation of nematode larval development2.86E-04
14GO:0009825: multidimensional cell growth3.45E-04
15GO:0009416: response to light stimulus5.16E-04
16GO:0033014: tetrapyrrole biosynthetic process6.76E-04
17GO:0010321: regulation of vegetative phase change6.76E-04
18GO:0009956: radial pattern formation8.97E-04
19GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity1.39E-03
20GO:0010942: positive regulation of cell death1.39E-03
21GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity1.66E-03
22GO:0015995: chlorophyll biosynthetic process1.70E-03
23GO:0000082: G1/S transition of mitotic cell cycle1.95E-03
24GO:0010444: guard mother cell differentiation1.95E-03
25GO:0050790: regulation of catalytic activity1.95E-03
26GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway1.95E-03
27GO:0007050: cell cycle arrest1.95E-03
28GO:0006811: ion transport2.07E-03
29GO:0051301: cell division2.83E-03
30GO:0006783: heme biosynthetic process2.91E-03
31GO:0048589: developmental growth2.91E-03
32GO:0009056: catabolic process2.91E-03
33GO:0009744: response to sucrose3.06E-03
34GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.57E-03
35GO:0006782: protoporphyrinogen IX biosynthetic process3.62E-03
36GO:0048829: root cap development3.62E-03
37GO:0016567: protein ubiquitination3.77E-03
38GO:0008285: negative regulation of cell proliferation4.00E-03
39GO:0009750: response to fructose4.00E-03
40GO:0010152: pollen maturation4.39E-03
41GO:0010588: cotyledon vascular tissue pattern formation4.79E-03
42GO:0009718: anthocyanin-containing compound biosynthetic process4.79E-03
43GO:0009767: photosynthetic electron transport chain4.79E-03
44GO:0009933: meristem structural organization5.20E-03
45GO:0010540: basipetal auxin transport5.20E-03
46GO:0048768: root hair cell tip growth5.20E-03
47GO:0080188: RNA-directed DNA methylation5.63E-03
48GO:0009969: xyloglucan biosynthetic process5.63E-03
49GO:0051726: regulation of cell cycle6.18E-03
50GO:0080147: root hair cell development6.51E-03
51GO:0006874: cellular calcium ion homeostasis6.98E-03
52GO:0043622: cortical microtubule organization6.98E-03
53GO:0071555: cell wall organization7.25E-03
54GO:0006306: DNA methylation7.45E-03
55GO:0003333: amino acid transmembrane transport7.45E-03
56GO:0009734: auxin-activated signaling pathway8.65E-03
57GO:0048443: stamen development8.93E-03
58GO:0006284: base-excision repair8.93E-03
59GO:0010091: trichome branching8.93E-03
60GO:0042127: regulation of cell proliferation8.93E-03
61GO:0000226: microtubule cytoskeleton organization9.99E-03
62GO:0048653: anther development9.99E-03
63GO:0010305: leaf vascular tissue pattern formation1.05E-02
64GO:0009958: positive gravitropism1.05E-02
65GO:0009741: response to brassinosteroid1.05E-02
66GO:0007018: microtubule-based movement1.11E-02
67GO:0009791: post-embryonic development1.16E-02
68GO:0009749: response to glucose1.16E-02
69GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.22E-02
70GO:0002229: defense response to oomycetes1.22E-02
71GO:0010583: response to cyclopentenone1.28E-02
72GO:0031047: gene silencing by RNA1.28E-02
73GO:0010411: xyloglucan metabolic process1.78E-02
74GO:0009832: plant-type cell wall biogenesis1.98E-02
75GO:0006865: amino acid transport2.19E-02
76GO:0006468: protein phosphorylation2.29E-02
77GO:0030001: metal ion transport2.48E-02
78GO:0009926: auxin polar transport2.71E-02
79GO:0042546: cell wall biogenesis2.79E-02
80GO:0009965: leaf morphogenesis2.95E-02
81GO:0048364: root development2.99E-02
82GO:0009664: plant-type cell wall organization3.19E-02
83GO:0009733: response to auxin3.26E-02
84GO:0048316: seed development3.86E-02
85GO:0048367: shoot system development3.86E-02
86GO:0009624: response to nematode4.31E-02
87GO:0009908: flower development4.58E-02
RankGO TermAdjusted P value
1GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.51E-05
2GO:0008568: microtubule-severing ATPase activity1.23E-04
3GO:0004109: coproporphyrinogen oxidase activity2.86E-04
4GO:0008805: carbon-monoxide oxygenase activity2.86E-04
5GO:0017022: myosin binding2.86E-04
6GO:0010296: prenylcysteine methylesterase activity2.86E-04
7GO:0004871: signal transducer activity8.21E-04
8GO:0010328: auxin influx transmembrane transporter activity8.97E-04
9GO:0043495: protein anchor8.97E-04
10GO:0004930: G-protein coupled receptor activity8.97E-04
11GO:0010011: auxin binding8.97E-04
12GO:0016758: transferase activity, transferring hexosyl groups9.73E-04
13GO:0008725: DNA-3-methyladenine glycosylase activity1.13E-03
14GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity1.39E-03
15GO:0030332: cyclin binding1.39E-03
16GO:0008378: galactosyltransferase activity4.39E-03
17GO:0019888: protein phosphatase regulator activity4.79E-03
18GO:0005217: intracellular ligand-gated ion channel activity5.63E-03
19GO:0004970: ionotropic glutamate receptor activity5.63E-03
20GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding8.31E-03
21GO:0001085: RNA polymerase II transcription factor binding1.05E-02
22GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity1.05E-02
23GO:0008017: microtubule binding1.06E-02
24GO:0010181: FMN binding1.11E-02
25GO:0019901: protein kinase binding1.16E-02
26GO:0016762: xyloglucan:xyloglucosyl transferase activity1.22E-02
27GO:0016798: hydrolase activity, acting on glycosyl bonds1.78E-02
28GO:0008236: serine-type peptidase activity1.85E-02
29GO:0005096: GTPase activator activity1.98E-02
30GO:0004693: cyclin-dependent protein serine/threonine kinase activity2.05E-02
31GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.12E-02
32GO:0004712: protein serine/threonine/tyrosine kinase activity2.41E-02
33GO:0004674: protein serine/threonine kinase activity2.80E-02
34GO:0015293: symporter activity2.95E-02
35GO:0005515: protein binding3.36E-02
36GO:0003777: microtubule motor activity3.60E-02
37GO:0015171: amino acid transmembrane transporter activity3.60E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0009531: secondary cell wall6.76E-04
3GO:0005874: microtubule3.27E-03
4GO:0000159: protein phosphatase type 2A complex4.00E-03
5GO:0000419: DNA-directed RNA polymerase V complex6.06E-03
6GO:0043234: protein complex6.06E-03
7GO:0000139: Golgi membrane1.15E-02
8GO:0016592: mediator complex1.28E-02
9GO:0071944: cell periphery1.34E-02
10GO:0005667: transcription factor complex1.71E-02
11GO:0090406: pollen tube2.71E-02
12GO:0005834: heterotrimeric G-protein complex3.95E-02
13GO:0005654: nucleoplasm4.95E-02
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Gene type



Gene DE type