co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G28390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048034: heme O biosynthetic process	0.00E+00
2	GO:0001789: G-protein coupled receptor signaling pathway, coupled to S1P second messenger	0.00E+00
3	GO:0030149: sphingolipid catabolic process	0.00E+00
4	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
5	GO:0009407: toxin catabolic process	7.37E-08
6	GO:0000162: tryptophan biosynthetic process	5.70E-06
7	GO:0010600: regulation of auxin biosynthetic process	6.94E-06
8	GO:0046283: anthocyanin-containing compound metabolic process	1.16E-05
9	GO:0009851: auxin biosynthetic process	2.81E-05
10	GO:0007186: G-protein coupled receptor signaling pathway	5.72E-05
11	GO:0033306: phytol metabolic process	8.61E-05
12	GO:0042964: thioredoxin reduction	8.61E-05
13	GO:0060862: negative regulation of floral organ abscission	8.61E-05
14	GO:0009636: response to toxic substance	2.03E-04
15	GO:0019632: shikimate metabolic process	2.04E-04
16	GO:0031349: positive regulation of defense response	2.04E-04
17	GO:0019752: carboxylic acid metabolic process	2.04E-04
18	GO:1902000: homogentisate catabolic process	2.04E-04
19	GO:0009723: response to ethylene	2.40E-04
20	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	3.42E-04
21	GO:0055074: calcium ion homeostasis	3.42E-04
22	GO:0009072: aromatic amino acid family metabolic process	3.42E-04
23	GO:0045454: cell redox homeostasis	3.60E-04
24	GO:0006571: tyrosine biosynthetic process	4.92E-04
25	GO:0055114: oxidation-reduction process	5.50E-04
26	GO:0042744: hydrogen peroxide catabolic process	6.45E-04
27	GO:0033358: UDP-L-arabinose biosynthetic process	6.55E-04
28	GO:0010188: response to microbial phytotoxin	6.55E-04
29	GO:0006878: cellular copper ion homeostasis	6.55E-04
30	GO:0045227: capsule polysaccharide biosynthetic process	6.55E-04
31	GO:1901657: glycosyl compound metabolic process	7.28E-04
32	GO:0006979: response to oxidative stress	7.59E-04
33	GO:0030308: negative regulation of cell growth	8.29E-04
34	GO:0006564: L-serine biosynthetic process	8.29E-04
35	GO:0009228: thiamine biosynthetic process	1.01E-03
36	GO:0006561: proline biosynthetic process	1.01E-03
37	GO:0010942: positive regulation of cell death	1.01E-03
38	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.01E-03
39	GO:0009617: response to bacterium	1.02E-03
40	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.20E-03
41	GO:0009094: L-phenylalanine biosynthetic process	1.20E-03
42	GO:0009423: chorismate biosynthetic process	1.20E-03
43	GO:0045926: negative regulation of growth	1.20E-03
44	GO:0010311: lateral root formation	1.23E-03
45	GO:0010119: regulation of stomatal movement	1.35E-03
46	GO:0050832: defense response to fungus	1.35E-03
47	GO:1900056: negative regulation of leaf senescence	1.41E-03
48	GO:0050829: defense response to Gram-negative bacterium	1.41E-03
49	GO:0010497: plasmodesmata-mediated intercellular transport	1.86E-03
50	GO:0019430: removal of superoxide radicals	1.86E-03
51	GO:0010120: camalexin biosynthetic process	1.86E-03
52	GO:0010204: defense response signaling pathway, resistance gene-independent	1.86E-03
53	GO:0015996: chlorophyll catabolic process	1.86E-03
54	GO:0019432: triglyceride biosynthetic process	2.10E-03
55	GO:0009821: alkaloid biosynthetic process	2.10E-03
56	GO:0006783: heme biosynthetic process	2.10E-03
57	GO:0046685: response to arsenic-containing substance	2.10E-03
58	GO:2000280: regulation of root development	2.35E-03
59	GO:0052544: defense response by callose deposition in cell wall	2.87E-03
60	GO:0072593: reactive oxygen species metabolic process	2.87E-03
61	GO:0009073: aromatic amino acid family biosynthetic process	2.87E-03
62	GO:0002213: defense response to insect	3.15E-03
63	GO:0009620: response to fungus	3.28E-03
64	GO:0009785: blue light signaling pathway	3.43E-03
65	GO:0006807: nitrogen compound metabolic process	3.43E-03
66	GO:0009718: anthocyanin-containing compound biosynthetic process	3.43E-03
67	GO:0006541: glutamine metabolic process	3.73E-03
68	GO:0009225: nucleotide-sugar metabolic process	4.03E-03
69	GO:0045333: cellular respiration	4.65E-03
70	GO:0005992: trehalose biosynthetic process	4.65E-03
71	GO:0009058: biosynthetic process	4.73E-03
72	GO:0006874: cellular calcium ion homeostasis	4.98E-03
73	GO:0006825: copper ion transport	4.98E-03
74	GO:0016998: cell wall macromolecule catabolic process	5.32E-03
75	GO:0048511: rhythmic process	5.32E-03
76	GO:0071215: cellular response to abscisic acid stimulus	6.01E-03
77	GO:0006012: galactose metabolic process	6.01E-03
78	GO:0010150: leaf senescence	6.18E-03
79	GO:0042127: regulation of cell proliferation	6.36E-03
80	GO:0005975: carbohydrate metabolic process	6.46E-03
81	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.73E-03
82	GO:0046686: response to cadmium ion	6.73E-03
83	GO:0010118: stomatal movement	7.10E-03
84	GO:0006520: cellular amino acid metabolic process	7.48E-03
85	GO:0006662: glycerol ether metabolic process	7.48E-03
86	GO:0048544: recognition of pollen	7.87E-03
87	GO:0010183: pollen tube guidance	8.26E-03
88	GO:0009749: response to glucose	8.26E-03
89	GO:0009630: gravitropism	9.07E-03
90	GO:0010027: thylakoid membrane organization	1.12E-02
91	GO:0009615: response to virus	1.12E-02
92	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.17E-02
93	GO:0006974: cellular response to DNA damage stimulus	1.21E-02
94	GO:0016049: cell growth	1.31E-02
95	GO:0008219: cell death	1.35E-02
96	GO:0006499: N-terminal protein myristoylation	1.45E-02
97	GO:0010043: response to zinc ion	1.50E-02
98	GO:0007568: aging	1.50E-02
99	GO:0042742: defense response to bacterium	1.52E-02
100	GO:0034599: cellular response to oxidative stress	1.65E-02
101	GO:0042542: response to hydrogen peroxide	1.86E-02
102	GO:0009651: response to salt stress	2.13E-02
103	GO:0006855: drug transmembrane transport	2.14E-02
104	GO:0009409: response to cold	2.23E-02
105	GO:0009664: plant-type cell wall organization	2.25E-02
106	GO:0009846: pollen germination	2.25E-02
107	GO:0042538: hyperosmotic salinity response	2.25E-02
108	GO:0048316: seed development	2.73E-02
109	GO:0009626: plant-type hypersensitive response	2.79E-02
110	GO:0009735: response to cytokinin	2.85E-02
111	GO:0009740: gibberellic acid mediated signaling pathway	2.92E-02
112	GO:0042545: cell wall modification	2.98E-02
113	GO:0009624: response to nematode	3.04E-02
114	GO:0009611: response to wounding	3.19E-02
115	GO:0009845: seed germination	3.78E-02
116	GO:0009793: embryo development ending in seed dormancy	4.34E-02
117	GO:0045490: pectin catabolic process	4.49E-02

Rank	GO Term	Adjusted P value
1	GO:0051670: inulinase activity	0.00E+00
2	GO:0004764: shikimate 3-dehydrogenase (NADP+) activity	0.00E+00
3	GO:0016247: channel regulator activity	0.00E+00
4	GO:0005095: GTPase inhibitor activity	0.00E+00
5	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
6	GO:0003855: 3-dehydroquinate dehydratase activity	0.00E+00
7	GO:0008495: protoheme IX farnesyltransferase activity	0.00E+00
8	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
9	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
10	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
11	GO:0004364: glutathione transferase activity	1.96E-07
12	GO:0019172: glyoxalase III activity	4.01E-07
13	GO:0004601: peroxidase activity	7.91E-07
14	GO:0004049: anthranilate synthase activity	1.53E-06
15	GO:0033984: indole-3-glycerol-phosphate lyase activity	8.61E-05
16	GO:0051669: fructan beta-fructosidase activity	8.61E-05
17	GO:0047326: inositol tetrakisphosphate 5-kinase activity	8.61E-05
18	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	8.61E-05
19	GO:0031219: levanase activity	8.61E-05
20	GO:2001147: camalexin binding	8.61E-05
21	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	8.61E-05
22	GO:0004649: poly(ADP-ribose) glycohydrolase activity	8.61E-05
23	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	8.61E-05
24	GO:2001227: quercitrin binding	8.61E-05
25	GO:0000824: inositol tetrakisphosphate 3-kinase activity	8.61E-05
26	GO:0008517: folic acid transporter activity	2.04E-04
27	GO:0004566: beta-glucuronidase activity	2.04E-04
28	GO:0019829: cation-transporting ATPase activity	3.42E-04
29	GO:0031683: G-protein beta/gamma-subunit complex binding	3.42E-04
30	GO:0001664: G-protein coupled receptor binding	3.42E-04
31	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	4.92E-04
32	GO:0004791: thioredoxin-disulfide reductase activity	5.62E-04
33	GO:0004930: G-protein coupled receptor activity	6.55E-04
34	GO:0004659: prenyltransferase activity	6.55E-04
35	GO:0050373: UDP-arabinose 4-epimerase activity	6.55E-04
36	GO:0004834: tryptophan synthase activity	6.55E-04
37	GO:0005496: steroid binding	8.29E-04
38	GO:0003824: catalytic activity	8.80E-04
39	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.01E-03
40	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.01E-03
41	GO:0008200: ion channel inhibitor activity	1.01E-03
42	GO:0003978: UDP-glucose 4-epimerase activity	1.20E-03
43	GO:0004602: glutathione peroxidase activity	1.20E-03
44	GO:0004144: diacylglycerol O-acyltransferase activity	1.20E-03
45	GO:0051020: GTPase binding	1.20E-03
46	GO:0051920: peroxiredoxin activity	1.20E-03
47	GO:0043295: glutathione binding	1.41E-03
48	GO:0016831: carboxy-lyase activity	1.41E-03
49	GO:0008422: beta-glucosidase activity	1.61E-03
50	GO:0004311: farnesyltranstransferase activity	1.63E-03
51	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.63E-03
52	GO:0016209: antioxidant activity	1.63E-03
53	GO:0005375: copper ion transmembrane transporter activity	1.86E-03
54	GO:0016844: strictosidine synthase activity	2.35E-03
55	GO:0004713: protein tyrosine kinase activity	2.61E-03
56	GO:0008794: arsenate reductase (glutaredoxin) activity	2.87E-03
57	GO:0005543: phospholipid binding	2.87E-03
58	GO:0008559: xenobiotic-transporting ATPase activity	2.87E-03
59	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.43E-03
60	GO:0004022: alcohol dehydrogenase (NAD) activity	3.43E-03
61	GO:0031072: heat shock protein binding	3.43E-03
62	GO:0051082: unfolded protein binding	3.59E-03
63	GO:0015035: protein disulfide oxidoreductase activity	3.70E-03
64	GO:0005217: intracellular ligand-gated ion channel activity	4.03E-03
65	GO:0004970: ionotropic glutamate receptor activity	4.03E-03
66	GO:0004867: serine-type endopeptidase inhibitor activity	4.03E-03
67	GO:0030170: pyridoxal phosphate binding	4.98E-03
68	GO:0047134: protein-disulfide reductase activity	6.73E-03
69	GO:0020037: heme binding	6.86E-03
70	GO:0005199: structural constituent of cell wall	7.48E-03
71	GO:0030276: clathrin binding	7.48E-03
72	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	8.84E-03
73	GO:0030246: carbohydrate binding	9.07E-03
74	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	9.48E-03
75	GO:0005507: copper ion binding	9.74E-03
76	GO:0016788: hydrolase activity, acting on ester bonds	9.75E-03
77	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.03E-02
78	GO:0102483: scopolin beta-glucosidase activity	1.26E-02
79	GO:0004683: calmodulin-dependent protein kinase activity	1.26E-02
80	GO:0052689: carboxylic ester hydrolase activity	1.31E-02
81	GO:0030145: manganese ion binding	1.50E-02
82	GO:0003924: GTPase activity	1.76E-02
83	GO:0050661: NADP binding	1.76E-02
84	GO:0045330: aspartyl esterase activity	2.55E-02
85	GO:0045735: nutrient reservoir activity	2.67E-02
86	GO:0030599: pectinesterase activity	2.92E-02
87	GO:0004674: protein serine/threonine kinase activity	3.74E-02
88	GO:0016301: kinase activity	3.83E-02
89	GO:0046910: pectinesterase inhibitor activity	4.27E-02
90	GO:0005516: calmodulin binding	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0005950: anthranilate synthase complex	4.01E-07
2	GO:0030139: endocytic vesicle	3.42E-04
3	GO:0009530: primary cell wall	3.42E-04
4	GO:0032585: multivesicular body membrane	4.92E-04
5	GO:0005783: endoplasmic reticulum	7.05E-04
6	GO:0005773: vacuole	1.26E-03
7	GO:0031901: early endosome membrane	2.10E-03
8	GO:0005794: Golgi apparatus	2.41E-03
9	GO:0005886: plasma membrane	2.77E-03
10	GO:0005765: lysosomal membrane	2.87E-03
11	GO:0009506: plasmodesma	3.23E-03
12	GO:0005769: early endosome	4.34E-03
13	GO:0009570: chloroplast stroma	6.41E-03
14	GO:0030136: clathrin-coated vesicle	6.73E-03
15	GO:0071944: cell periphery	9.48E-03
16	GO:0032580: Golgi cisterna membrane	9.91E-03
17	GO:0005788: endoplasmic reticulum lumen	1.17E-02
18	GO:0000325: plant-type vacuole	1.50E-02
19	GO:0090406: pollen tube	1.92E-02
20	GO:0009505: plant-type cell wall	2.03E-02
21	GO:0005829: cytosol	2.12E-02
22	GO:0005774: vacuolar membrane	2.24E-02
23	GO:0048046: apoplast	2.40E-02
24	GO:0005789: endoplasmic reticulum membrane	2.60E-02
25	GO:0005618: cell wall	2.73E-02
26	GO:0010008: endosome membrane	2.73E-02
27	GO:0005834: heterotrimeric G-protein complex	2.79E-02
28	GO:0005576: extracellular region	3.16E-02
29	GO:0010287: plastoglobule	3.44E-02
30	GO:0005759: mitochondrial matrix	4.20E-02