co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G27830

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904250: positive regulation of age-related resistance	0.00E+00
2	GO:0010398: xylogalacturonan metabolic process	0.00E+00
3	GO:0090400: stress-induced premature senescence	0.00E+00
4	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
5	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
6	GO:0072722: response to amitrole	0.00E+00
7	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
8	GO:0006216: cytidine catabolic process	0.00E+00
9	GO:0046686: response to cadmium ion	9.09E-07
10	GO:0009407: toxin catabolic process	2.85E-05
11	GO:0006564: L-serine biosynthetic process	3.97E-05
12	GO:0006099: tricarboxylic acid cycle	4.09E-05
13	GO:0010150: leaf senescence	5.86E-05
14	GO:1900057: positive regulation of leaf senescence	1.09E-04
15	GO:0006102: isocitrate metabolic process	1.40E-04
16	GO:0006680: glucosylceramide catabolic process	1.80E-04
17	GO:0042964: thioredoxin reduction	1.80E-04
18	GO:0055114: oxidation-reduction process	2.51E-04
19	GO:0051252: regulation of RNA metabolic process	4.05E-04
20	GO:0015709: thiosulfate transport	4.05E-04
21	GO:0031204: posttranslational protein targeting to membrane, translocation	4.05E-04
22	GO:0071422: succinate transmembrane transport	4.05E-04
23	GO:0046939: nucleotide phosphorylation	4.05E-04
24	GO:0080026: response to indolebutyric acid	4.05E-04
25	GO:0015865: purine nucleotide transport	4.05E-04
26	GO:1902000: homogentisate catabolic process	4.05E-04
27	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.05E-04
28	GO:0006807: nitrogen compound metabolic process	4.55E-04
29	GO:0009651: response to salt stress	4.66E-04
30	GO:0000162: tryptophan biosynthetic process	6.38E-04
31	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	6.61E-04
32	GO:0006591: ornithine metabolic process	6.61E-04
33	GO:0002230: positive regulation of defense response to virus by host	6.61E-04
34	GO:0055074: calcium ion homeostasis	6.61E-04
35	GO:0006556: S-adenosylmethionine biosynthetic process	6.61E-04
36	GO:0010272: response to silver ion	6.61E-04
37	GO:0009072: aromatic amino acid family metabolic process	6.61E-04
38	GO:0009062: fatty acid catabolic process	6.61E-04
39	GO:0061158: 3'-UTR-mediated mRNA destabilization	6.61E-04
40	GO:0009636: response to toxic substance	7.49E-04
41	GO:0016998: cell wall macromolecule catabolic process	8.51E-04
42	GO:0046902: regulation of mitochondrial membrane permeability	9.45E-04
43	GO:1902290: positive regulation of defense response to oomycetes	9.45E-04
44	GO:0080024: indolebutyric acid metabolic process	9.45E-04
45	GO:0015729: oxaloacetate transport	9.45E-04
46	GO:0006979: response to oxidative stress	1.21E-03
47	GO:0010188: response to microbial phytotoxin	1.25E-03
48	GO:0006878: cellular copper ion homeostasis	1.25E-03
49	GO:0009851: auxin biosynthetic process	1.57E-03
50	GO:0046283: anthocyanin-containing compound metabolic process	1.59E-03
51	GO:0071423: malate transmembrane transport	1.59E-03
52	GO:0045454: cell redox homeostasis	1.67E-03
53	GO:0009972: cytidine deamination	1.96E-03
54	GO:0006561: proline biosynthetic process	1.96E-03
55	GO:0009228: thiamine biosynthetic process	1.96E-03
56	GO:0035435: phosphate ion transmembrane transport	1.96E-03
57	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.96E-03
58	GO:0009058: biosynthetic process	2.06E-03
59	GO:0009751: response to salicylic acid	2.26E-03
60	GO:0006629: lipid metabolic process	2.31E-03
61	GO:0009099: valine biosynthetic process	2.35E-03
62	GO:0009554: megasporogenesis	2.35E-03
63	GO:0080113: regulation of seed growth	2.35E-03
64	GO:0009082: branched-chain amino acid biosynthetic process	2.35E-03
65	GO:0009615: response to virus	2.42E-03
66	GO:1902074: response to salt	2.77E-03
67	GO:0071669: plant-type cell wall organization or biogenesis	2.77E-03
68	GO:0008272: sulfate transport	2.77E-03
69	GO:0050829: defense response to Gram-negative bacterium	2.77E-03
70	GO:1900056: negative regulation of leaf senescence	2.77E-03
71	GO:0009819: drought recovery	3.21E-03
72	GO:0043068: positive regulation of programmed cell death	3.21E-03
73	GO:0010043: response to zinc ion	3.63E-03
74	GO:0010204: defense response signaling pathway, resistance gene-independent	3.67E-03
75	GO:0010497: plasmodesmata-mediated intercellular transport	3.67E-03
76	GO:0019430: removal of superoxide radicals	3.67E-03
77	GO:0010120: camalexin biosynthetic process	3.67E-03
78	GO:0022900: electron transport chain	3.67E-03
79	GO:0009097: isoleucine biosynthetic process	3.67E-03
80	GO:0010112: regulation of systemic acquired resistance	4.15E-03
81	GO:0009821: alkaloid biosynthetic process	4.15E-03
82	GO:0046685: response to arsenic-containing substance	4.15E-03
83	GO:0042742: defense response to bacterium	4.46E-03
84	GO:0006839: mitochondrial transport	4.53E-03
85	GO:0009098: leucine biosynthetic process	4.65E-03
86	GO:2000280: regulation of root development	4.65E-03
87	GO:1900426: positive regulation of defense response to bacterium	4.65E-03
88	GO:0009688: abscisic acid biosynthetic process	5.18E-03
89	GO:0043069: negative regulation of programmed cell death	5.18E-03
90	GO:0006032: chitin catabolic process	5.18E-03
91	GO:0000209: protein polyubiquitination	5.33E-03
92	GO:0000272: polysaccharide catabolic process	5.72E-03
93	GO:0052544: defense response by callose deposition in cell wall	5.72E-03
94	GO:0031347: regulation of defense response	6.20E-03
95	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	6.20E-03
96	GO:0071365: cellular response to auxin stimulus	6.28E-03
97	GO:0010102: lateral root morphogenesis	6.86E-03
98	GO:0055046: microgametogenesis	6.86E-03
99	GO:0009718: anthocyanin-containing compound biosynthetic process	6.86E-03
100	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	6.86E-03
101	GO:0007030: Golgi organization	8.08E-03
102	GO:0010167: response to nitrate	8.08E-03
103	GO:0009626: plant-type hypersensitive response	8.70E-03
104	GO:0009620: response to fungus	8.97E-03
105	GO:0005992: trehalose biosynthetic process	9.37E-03
106	GO:0006874: cellular calcium ion homeostasis	1.00E-02
107	GO:0010073: meristem maintenance	1.00E-02
108	GO:0006730: one-carbon metabolic process	1.14E-02
109	GO:0009693: ethylene biosynthetic process	1.22E-02
110	GO:0010227: floral organ abscission	1.22E-02
111	GO:0008152: metabolic process	1.23E-02
112	GO:0009306: protein secretion	1.29E-02
113	GO:0009561: megagametogenesis	1.29E-02
114	GO:0042631: cellular response to water deprivation	1.44E-02
115	GO:0006662: glycerol ether metabolic process	1.52E-02
116	GO:0045489: pectin biosynthetic process	1.52E-02
117	GO:0006814: sodium ion transport	1.60E-02
118	GO:0048544: recognition of pollen	1.60E-02
119	GO:0006623: protein targeting to vacuole	1.68E-02
120	GO:0010183: pollen tube guidance	1.68E-02
121	GO:0045490: pectin catabolic process	1.71E-02
122	GO:0006635: fatty acid beta-oxidation	1.77E-02
123	GO:0009630: gravitropism	1.85E-02
124	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.91E-02
125	GO:0071281: cellular response to iron ion	1.94E-02
126	GO:0019760: glucosinolate metabolic process	2.03E-02
127	GO:0006464: cellular protein modification process	2.03E-02
128	GO:0010468: regulation of gene expression	2.04E-02
129	GO:0051607: defense response to virus	2.20E-02
130	GO:0010029: regulation of seed germination	2.39E-02
131	GO:0009627: systemic acquired resistance	2.48E-02
132	GO:0006974: cellular response to DNA damage stimulus	2.48E-02
133	GO:0009409: response to cold	2.51E-02
134	GO:0006888: ER to Golgi vesicle-mediated transport	2.58E-02
135	GO:0016049: cell growth	2.68E-02
136	GO:0009817: defense response to fungus, incompatible interaction	2.77E-02
137	GO:0048767: root hair elongation	2.87E-02
138	GO:0050832: defense response to fungus	2.90E-02
139	GO:0006499: N-terminal protein myristoylation	2.97E-02
140	GO:0009723: response to ethylene	3.06E-02
141	GO:0048527: lateral root development	3.08E-02
142	GO:0007568: aging	3.08E-02
143	GO:0045087: innate immune response	3.28E-02
144	GO:0034599: cellular response to oxidative stress	3.39E-02
145	GO:0042542: response to hydrogen peroxide	3.82E-02
146	GO:0051707: response to other organism	3.93E-02
147	GO:0006812: cation transport	4.62E-02
148	GO:0009664: plant-type cell wall organization	4.62E-02
149	GO:0009846: pollen germination	4.62E-02
150	GO:0042538: hyperosmotic salinity response	4.62E-02
151	GO:0016042: lipid catabolic process	4.68E-02
152	GO:0006813: potassium ion transport	4.86E-02
153	GO:0051603: proteolysis involved in cellular protein catabolic process	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0070401: NADP+ binding	0.00E+00
2	GO:0047844: deoxycytidine deaminase activity	0.00E+00
3	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
4	GO:0016229: steroid dehydrogenase activity	0.00E+00
5	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
6	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
7	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
8	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.33E-05
9	GO:0004364: glutathione transferase activity	5.67E-05
10	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	5.89E-05
11	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	5.89E-05
12	GO:0043295: glutathione binding	1.09E-04
13	GO:0004033: aldo-keto reductase (NADP) activity	1.40E-04
14	GO:0004601: peroxidase activity	1.48E-04
15	GO:2001147: camalexin binding	1.80E-04
16	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.80E-04
17	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	1.80E-04
18	GO:0004649: poly(ADP-ribose) glycohydrolase activity	1.80E-04
19	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	1.80E-04
20	GO:0010179: IAA-Ala conjugate hydrolase activity	1.80E-04
21	GO:0047326: inositol tetrakisphosphate 5-kinase activity	1.80E-04
22	GO:2001227: quercitrin binding	1.80E-04
23	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	1.80E-04
24	GO:0048037: cofactor binding	1.80E-04
25	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.80E-04
26	GO:0000824: inositol tetrakisphosphate 3-kinase activity	1.80E-04
27	GO:0004348: glucosylceramidase activity	1.80E-04
28	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.80E-04
29	GO:1901677: phosphate transmembrane transporter activity	4.05E-04
30	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	4.05E-04
31	GO:0004776: succinate-CoA ligase (GDP-forming) activity	4.05E-04
32	GO:0004775: succinate-CoA ligase (ADP-forming) activity	4.05E-04
33	GO:0052739: phosphatidylserine 1-acylhydrolase activity	4.05E-04
34	GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity	4.05E-04
35	GO:0004617: phosphoglycerate dehydrogenase activity	4.05E-04
36	GO:0015117: thiosulfate transmembrane transporter activity	4.05E-04
37	GO:0008428: ribonuclease inhibitor activity	4.05E-04
38	GO:0019172: glyoxalase III activity	4.05E-04
39	GO:0005310: dicarboxylic acid transmembrane transporter activity	6.61E-04
40	GO:0015141: succinate transmembrane transporter activity	6.61E-04
41	GO:0004478: methionine adenosyltransferase activity	6.61E-04
42	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	6.61E-04
43	GO:0010178: IAA-amino acid conjugate hydrolase activity	9.45E-04
44	GO:0016656: monodehydroascorbate reductase (NADH) activity	9.45E-04
45	GO:0052656: L-isoleucine transaminase activity	9.45E-04
46	GO:0004165: dodecenoyl-CoA delta-isomerase activity	9.45E-04
47	GO:0052654: L-leucine transaminase activity	9.45E-04
48	GO:0005432: calcium:sodium antiporter activity	9.45E-04
49	GO:0015131: oxaloacetate transmembrane transporter activity	9.45E-04
50	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	9.45E-04
51	GO:0052655: L-valine transaminase activity	9.45E-04
52	GO:0008106: alcohol dehydrogenase (NADP+) activity	9.45E-04
53	GO:0017077: oxidative phosphorylation uncoupler activity	9.45E-04
54	GO:0019201: nucleotide kinase activity	9.45E-04
55	GO:0005086: ARF guanyl-nucleotide exchange factor activity	1.25E-03
56	GO:0004084: branched-chain-amino-acid transaminase activity	1.25E-03
57	GO:0004834: tryptophan synthase activity	1.25E-03
58	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.25E-03
59	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.25E-03
60	GO:0004031: aldehyde oxidase activity	1.25E-03
61	GO:0050302: indole-3-acetaldehyde oxidase activity	1.25E-03
62	GO:0004791: thioredoxin-disulfide reductase activity	1.47E-03
63	GO:0015035: protein disulfide oxidoreductase activity	1.51E-03
64	GO:0008948: oxaloacetate decarboxylase activity	1.59E-03
65	GO:0005471: ATP:ADP antiporter activity	1.59E-03
66	GO:0008374: O-acyltransferase activity	1.59E-03
67	GO:0035252: UDP-xylosyltransferase activity	1.96E-03
68	GO:0008237: metallopeptidase activity	2.16E-03
69	GO:0004126: cytidine deaminase activity	2.35E-03
70	GO:0051920: peroxiredoxin activity	2.35E-03
71	GO:0004017: adenylate kinase activity	2.35E-03
72	GO:0005507: copper ion binding	2.40E-03
73	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.77E-03
74	GO:0015140: malate transmembrane transporter activity	2.77E-03
75	GO:0004806: triglyceride lipase activity	2.84E-03
76	GO:0015491: cation:cation antiporter activity	3.21E-03
77	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.21E-03
78	GO:0016209: antioxidant activity	3.21E-03
79	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	3.67E-03
80	GO:0016844: strictosidine synthase activity	4.65E-03
81	GO:0004568: chitinase activity	5.18E-03
82	GO:0003824: catalytic activity	5.24E-03
83	GO:0008794: arsenate reductase (glutaredoxin) activity	5.72E-03
84	GO:0051287: NAD binding	6.20E-03
85	GO:0015116: sulfate transmembrane transporter activity	6.28E-03
86	GO:0016740: transferase activity	7.46E-03
87	GO:0031624: ubiquitin conjugating enzyme binding	7.46E-03
88	GO:0008061: chitin binding	8.08E-03
89	GO:0005217: intracellular ligand-gated ion channel activity	8.08E-03
90	GO:0004970: ionotropic glutamate receptor activity	8.08E-03
91	GO:0003727: single-stranded RNA binding	1.29E-02
92	GO:0047134: protein-disulfide reductase activity	1.37E-02
93	GO:0030170: pyridoxal phosphate binding	1.37E-02
94	GO:0004527: exonuclease activity	1.52E-02
95	GO:0005199: structural constituent of cell wall	1.52E-02
96	GO:0008080: N-acetyltransferase activity	1.52E-02
97	GO:0001085: RNA polymerase II transcription factor binding	1.52E-02
98	GO:0010181: FMN binding	1.60E-02
99	GO:0015297: antiporter activity	1.63E-02
100	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.94E-02
101	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.11E-02
102	GO:0016597: amino acid binding	2.20E-02
103	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.77E-02
104	GO:0043531: ADP binding	2.90E-02
105	GO:0050660: flavin adenine dinucleotide binding	3.06E-02
106	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.08E-02
107	GO:0030145: manganese ion binding	3.08E-02
108	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.08E-02
109	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.28E-02
110	GO:0061630: ubiquitin protein ligase activity	3.44E-02
111	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.50E-02
112	GO:0042803: protein homodimerization activity	4.10E-02
113	GO:0051537: 2 iron, 2 sulfur cluster binding	4.16E-02
114	GO:0005509: calcium ion binding	4.87E-02
115	GO:0016298: lipase activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0031205: endoplasmic reticulum Sec complex	0.00E+00
2	GO:0005784: Sec61 translocon complex	0.00E+00
3	GO:0045252: oxoglutarate dehydrogenase complex	1.80E-04
4	GO:0005788: endoplasmic reticulum lumen	2.60E-04
5	GO:0009530: primary cell wall	6.61E-04
6	GO:0005829: cytosol	7.89E-04
7	GO:0030173: integral component of Golgi membrane	2.35E-03
8	GO:0005737: cytoplasm	2.73E-03
9	GO:0005886: plasma membrane	3.60E-03
10	GO:0031901: early endosome membrane	4.15E-03
11	GO:0031090: organelle membrane	4.15E-03
12	GO:0017119: Golgi transport complex	5.18E-03
13	GO:0005750: mitochondrial respiratory chain complex III	7.46E-03
14	GO:0005794: Golgi apparatus	1.46E-02
15	GO:0005618: cell wall	1.76E-02
16	GO:0009570: chloroplast stroma	1.83E-02
17	GO:0016592: mediator complex	1.85E-02
18	GO:0071944: cell periphery	1.94E-02
19	GO:0005783: endoplasmic reticulum	2.08E-02
20	GO:0005667: transcription factor complex	2.48E-02
21	GO:0000151: ubiquitin ligase complex	2.77E-02
22	GO:0005773: vacuole	3.05E-02
23	GO:0009506: plasmodesma	3.46E-02
24	GO:0005774: vacuolar membrane	3.74E-02
25	GO:0090406: pollen tube	3.93E-02
26	GO:0005802: trans-Golgi network	4.04E-02
27	GO:0005743: mitochondrial inner membrane	4.48E-02
28	GO:0005768: endosome	4.72E-02
29	GO:0000502: proteasome complex	4.86E-02