co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G27585

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0005993: trehalose catabolic process	0.00E+00
2	GO:0080149: sucrose induced translational repression	0.00E+00
3	GO:0010407: non-classical arabinogalactan protein metabolic process	0.00E+00
4	GO:0000077: DNA damage checkpoint	1.08E-04
5	GO:0042350: GDP-L-fucose biosynthetic process	1.08E-04
6	GO:1990641: response to iron ion starvation	1.08E-04
7	GO:0019478: D-amino acid catabolic process	1.08E-04
8	GO:0055046: microgametogenesis	2.25E-04
9	GO:0009156: ribonucleoside monophosphate biosynthetic process	2.52E-04
10	GO:0006597: spermine biosynthetic process	2.52E-04
11	GO:0042853: L-alanine catabolic process	2.52E-04
12	GO:0040020: regulation of meiotic nuclear division	2.52E-04
13	GO:0006101: citrate metabolic process	2.52E-04
14	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	4.19E-04
15	GO:0010253: UDP-rhamnose biosynthetic process	4.19E-04
16	GO:0006651: diacylglycerol biosynthetic process	4.19E-04
17	GO:0055070: copper ion homeostasis	6.01E-04
18	GO:0051639: actin filament network formation	6.01E-04
19	GO:0072334: UDP-galactose transmembrane transport	6.01E-04
20	GO:0009226: nucleotide-sugar biosynthetic process	6.01E-04
21	GO:0010731: protein glutathionylation	6.01E-04
22	GO:0009165: nucleotide biosynthetic process	7.98E-04
23	GO:0051764: actin crosslink formation	7.98E-04
24	GO:1902584: positive regulation of response to water deprivation	7.98E-04
25	GO:0006621: protein retention in ER lumen	7.98E-04
26	GO:0033356: UDP-L-arabinose metabolic process	7.98E-04
27	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.01E-03
28	GO:0006097: glyoxylate cycle	1.01E-03
29	GO:0045927: positive regulation of growth	1.01E-03
30	GO:0006555: methionine metabolic process	1.23E-03
31	GO:0010315: auxin efflux	1.23E-03
32	GO:0006596: polyamine biosynthetic process	1.23E-03
33	GO:0019509: L-methionine salvage from methylthioadenosine	1.47E-03
34	GO:0034389: lipid particle organization	1.47E-03
35	GO:0017148: negative regulation of translation	1.47E-03
36	GO:0006401: RNA catabolic process	1.73E-03
37	GO:0006744: ubiquinone biosynthetic process	1.73E-03
38	GO:0080186: developmental vegetative growth	1.73E-03
39	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.73E-03
40	GO:0071669: plant-type cell wall organization or biogenesis	1.73E-03
41	GO:0006605: protein targeting	2.00E-03
42	GO:0006102: isocitrate metabolic process	2.00E-03
43	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.00E-03
44	GO:0030968: endoplasmic reticulum unfolded protein response	2.28E-03
45	GO:0006002: fructose 6-phosphate metabolic process	2.28E-03
46	GO:0015996: chlorophyll catabolic process	2.28E-03
47	GO:0010332: response to gamma radiation	2.57E-03
48	GO:0090305: nucleic acid phosphodiester bond hydrolysis	2.57E-03
49	GO:0090332: stomatal closure	2.88E-03
50	GO:0016192: vesicle-mediated transport	2.89E-03
51	GO:0051555: flavonol biosynthetic process	3.20E-03
52	GO:0046856: phosphatidylinositol dephosphorylation	3.53E-03
53	GO:0051603: proteolysis involved in cellular protein catabolic process	3.55E-03
54	GO:0030036: actin cytoskeleton organization	4.23E-03
55	GO:0034605: cellular response to heat	4.59E-03
56	GO:0007033: vacuole organization	4.96E-03
57	GO:0010053: root epidermal cell differentiation	4.96E-03
58	GO:0009225: nucleotide-sugar metabolic process	4.96E-03
59	GO:0000162: tryptophan biosynthetic process	5.35E-03
60	GO:0034976: response to endoplasmic reticulum stress	5.35E-03
61	GO:0051017: actin filament bundle assembly	5.75E-03
62	GO:0009116: nucleoside metabolic process	5.75E-03
63	GO:0030150: protein import into mitochondrial matrix	5.75E-03
64	GO:0008299: isoprenoid biosynthetic process	6.15E-03
65	GO:0009058: biosynthetic process	6.41E-03
66	GO:0019915: lipid storage	6.56E-03
67	GO:0009411: response to UV	7.42E-03
68	GO:0010584: pollen exine formation	7.87E-03
69	GO:0009561: megagametogenesis	7.87E-03
70	GO:0042127: regulation of cell proliferation	7.87E-03
71	GO:0009738: abscisic acid-activated signaling pathway	8.81E-03
72	GO:0009555: pollen development	9.19E-03
73	GO:0048868: pollen tube development	9.26E-03
74	GO:0006623: protein targeting to vacuole	1.02E-02
75	GO:0016032: viral process	1.12E-02
76	GO:0006457: protein folding	1.28E-02
77	GO:0001666: response to hypoxia	1.39E-02
78	GO:0009860: pollen tube growth	1.40E-02
79	GO:0006906: vesicle fusion	1.51E-02
80	GO:0007275: multicellular organism development	1.53E-02
81	GO:0030244: cellulose biosynthetic process	1.68E-02
82	GO:0009832: plant-type cell wall biogenesis	1.74E-02
83	GO:0048767: root hair elongation	1.74E-02
84	GO:0006811: ion transport	1.80E-02
85	GO:0006099: tricarboxylic acid cycle	2.05E-02
86	GO:0006887: exocytosis	2.25E-02
87	GO:0010114: response to red light	2.38E-02
88	GO:0009744: response to sucrose	2.38E-02
89	GO:0051707: response to other organism	2.38E-02
90	GO:0000209: protein polyubiquitination	2.45E-02
91	GO:0009636: response to toxic substance	2.59E-02
92	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.73E-02
93	GO:0009846: pollen germination	2.80E-02
94	GO:0006486: protein glycosylation	2.94E-02
95	GO:0010224: response to UV-B	3.02E-02
96	GO:0015031: protein transport	3.03E-02
97	GO:0006096: glycolytic process	3.32E-02
98	GO:0009553: embryo sac development	3.70E-02
99	GO:0051726: regulation of cell cycle	3.94E-02
100	GO:0045893: positive regulation of transcription, DNA-templated	4.84E-02
101	GO:0009790: embryo development	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0005046: KDEL sequence binding	0.00E+00
2	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
3	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
4	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
5	GO:0016768: spermine synthase activity	1.08E-04
6	GO:0050577: GDP-L-fucose synthase activity	1.08E-04
7	GO:0015927: trehalase activity	1.08E-04
8	GO:0030942: endoplasmic reticulum signal peptide binding	1.08E-04
9	GO:0102293: pheophytinase b activity	1.08E-04
10	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	1.08E-04
11	GO:0043813: phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity	1.08E-04
12	GO:0047746: chlorophyllase activity	2.52E-04
13	GO:0010297: heteropolysaccharide binding	2.52E-04
14	GO:0008460: dTDP-glucose 4,6-dehydratase activity	2.52E-04
15	GO:0003994: aconitate hydratase activity	2.52E-04
16	GO:0004766: spermidine synthase activity	2.52E-04
17	GO:0010280: UDP-L-rhamnose synthase activity	2.52E-04
18	GO:0050347: trans-octaprenyltranstransferase activity	2.52E-04
19	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	2.52E-04
20	GO:0000774: adenyl-nucleotide exchange factor activity	2.52E-04
21	GO:0052691: UDP-arabinopyranose mutase activity	2.52E-04
22	GO:0050377: UDP-glucose 4,6-dehydratase activity	2.52E-04
23	GO:0048531: beta-1,3-galactosyltransferase activity	2.52E-04
24	GO:0045174: glutathione dehydrogenase (ascorbate) activity	4.19E-04
25	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	4.19E-04
26	GO:0005460: UDP-glucose transmembrane transporter activity	6.01E-04
27	GO:0004749: ribose phosphate diphosphokinase activity	6.01E-04
28	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	6.01E-04
29	GO:0016853: isomerase activity	7.52E-04
30	GO:0004659: prenyltransferase activity	7.98E-04
31	GO:0004834: tryptophan synthase activity	7.98E-04
32	GO:0046923: ER retention sequence binding	7.98E-04
33	GO:0016866: intramolecular transferase activity	7.98E-04
34	GO:0005459: UDP-galactose transmembrane transporter activity	1.01E-03
35	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	1.23E-03
36	GO:0004656: procollagen-proline 4-dioxygenase activity	1.47E-03
37	GO:0008195: phosphatidate phosphatase activity	1.47E-03
38	GO:0008320: protein transmembrane transporter activity	1.73E-03
39	GO:0043295: glutathione binding	1.73E-03
40	GO:0003872: 6-phosphofructokinase activity	1.73E-03
41	GO:0003746: translation elongation factor activity	1.99E-03
42	GO:0008312: 7S RNA binding	2.00E-03
43	GO:0004869: cysteine-type endopeptidase inhibitor activity	2.00E-03
44	GO:0005198: structural molecule activity	2.87E-03
45	GO:0030234: enzyme regulator activity	3.20E-03
46	GO:0004161: dimethylallyltranstransferase activity	3.53E-03
47	GO:0008378: galactosyltransferase activity	3.87E-03
48	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	3.87E-03
49	GO:0004175: endopeptidase activity	4.59E-03
50	GO:0004867: serine-type endopeptidase inhibitor activity	4.96E-03
51	GO:0051536: iron-sulfur cluster binding	5.75E-03
52	GO:0031418: L-ascorbic acid binding	5.75E-03
53	GO:0051087: chaperone binding	6.15E-03
54	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	6.24E-03
55	GO:0004298: threonine-type endopeptidase activity	6.56E-03
56	GO:0030170: pyridoxal phosphate binding	6.75E-03
57	GO:0016760: cellulose synthase (UDP-forming) activity	7.42E-03
58	GO:0016887: ATPase activity	7.73E-03
59	GO:0003756: protein disulfide isomerase activity	7.87E-03
60	GO:0005102: receptor binding	8.32E-03
61	GO:0050662: coenzyme binding	9.74E-03
62	GO:0004872: receptor activity	1.02E-02
63	GO:0004518: nuclease activity	1.12E-02
64	GO:0051015: actin filament binding	1.18E-02
65	GO:0005507: copper ion binding	1.44E-02
66	GO:0005524: ATP binding	1.51E-02
67	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.68E-02
68	GO:0061630: ubiquitin protein ligase activity	1.70E-02
69	GO:0050897: cobalt ion binding	1.86E-02
70	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.99E-02
71	GO:0042803: protein homodimerization activity	2.03E-02
72	GO:0000149: SNARE binding	2.12E-02
73	GO:0051539: 4 iron, 4 sulfur cluster binding	2.18E-02
74	GO:0004364: glutathione transferase activity	2.31E-02
75	GO:0005484: SNAP receptor activity	2.38E-02
76	GO:0051537: 2 iron, 2 sulfur cluster binding	2.52E-02
77	GO:0031625: ubiquitin protein ligase binding	3.17E-02
78	GO:0051082: unfolded protein binding	3.78E-02
79	GO:0016758: transferase activity, transferring hexosyl groups	4.35E-02
80	GO:0016829: lyase activity	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0000138: Golgi trans cisterna	1.08E-04
2	GO:0001405: presequence translocase-associated import motor	1.08E-04
3	GO:0032432: actin filament bundle	6.01E-04
4	GO:0005789: endoplasmic reticulum membrane	6.74E-04
5	GO:0005945: 6-phosphofructokinase complex	1.01E-03
6	GO:0005788: endoplasmic reticulum lumen	1.29E-03
7	GO:0030173: integral component of Golgi membrane	1.47E-03
8	GO:0005801: cis-Golgi network	1.47E-03
9	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	1.73E-03
10	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.28E-03
11	GO:0005811: lipid particle	2.28E-03
12	GO:0031901: early endosome membrane	2.57E-03
13	GO:0008540: proteasome regulatory particle, base subcomplex	2.88E-03
14	GO:0000502: proteasome complex	3.43E-03
15	GO:0005884: actin filament	3.53E-03
16	GO:0005795: Golgi stack	4.96E-03
17	GO:0030176: integral component of endoplasmic reticulum membrane	4.96E-03
18	GO:0005839: proteasome core complex	6.56E-03
19	GO:0005744: mitochondrial inner membrane presequence translocase complex	7.87E-03
20	GO:0005615: extracellular space	9.39E-03
21	GO:0016592: mediator complex	1.12E-02
22	GO:0032580: Golgi cisterna membrane	1.23E-02
23	GO:0031201: SNARE complex	2.25E-02
24	GO:0031902: late endosome membrane	2.25E-02
25	GO:0005794: Golgi apparatus	3.29E-02
26	GO:0016021: integral component of membrane	3.38E-02
27	GO:0005739: mitochondrion	3.41E-02
28	GO:0005774: vacuolar membrane	3.52E-02
29	GO:0005783: endoplasmic reticulum	3.67E-02
30	GO:0009706: chloroplast inner membrane	3.78E-02
31	GO:0009543: chloroplast thylakoid lumen	4.44E-02
32	GO:0005623: cell	4.52E-02
33	GO:0005829: cytosol	4.66E-02