co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G27500

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046865: terpenoid transport	0.00E+00
2	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
3	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
4	GO:0006983: ER overload response	0.00E+00
5	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
6	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
7	GO:0032515: negative regulation of phosphoprotein phosphatase activity	0.00E+00
8	GO:0009751: response to salicylic acid	6.78E-05
9	GO:0009863: salicylic acid mediated signaling pathway	1.05E-04
10	GO:0010200: response to chitin	1.77E-04
11	GO:0006562: proline catabolic process	2.94E-04
12	GO:0032469: endoplasmic reticulum calcium ion homeostasis	2.94E-04
13	GO:0050691: regulation of defense response to virus by host	2.94E-04
14	GO:0032491: detection of molecule of fungal origin	2.94E-04
15	GO:1990542: mitochondrial transmembrane transport	2.94E-04
16	GO:0034975: protein folding in endoplasmic reticulum	2.94E-04
17	GO:0015760: glucose-6-phosphate transport	2.94E-04
18	GO:1990641: response to iron ion starvation	2.94E-04
19	GO:0033306: phytol metabolic process	2.94E-04
20	GO:0010112: regulation of systemic acquired resistance	4.36E-04
21	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.16E-04
22	GO:0006101: citrate metabolic process	6.45E-04
23	GO:0043066: negative regulation of apoptotic process	6.45E-04
24	GO:0008535: respiratory chain complex IV assembly	6.45E-04
25	GO:0015012: heparan sulfate proteoglycan biosynthetic process	6.45E-04
26	GO:0010133: proline catabolic process to glutamate	6.45E-04
27	GO:0006024: glycosaminoglycan biosynthetic process	6.45E-04
28	GO:0002240: response to molecule of oomycetes origin	6.45E-04
29	GO:0044419: interspecies interaction between organisms	6.45E-04
30	GO:0015712: hexose phosphate transport	6.45E-04
31	GO:0002237: response to molecule of bacterial origin	1.01E-03
32	GO:0080163: regulation of protein serine/threonine phosphatase activity	1.04E-03
33	GO:0015714: phosphoenolpyruvate transport	1.04E-03
34	GO:0080168: abscisic acid transport	1.04E-03
35	GO:0035436: triose phosphate transmembrane transport	1.04E-03
36	GO:0045836: positive regulation of meiotic nuclear division	1.04E-03
37	GO:0015783: GDP-fucose transport	1.04E-03
38	GO:0009410: response to xenobiotic stimulus	1.04E-03
39	GO:0015692: lead ion transport	1.04E-03
40	GO:0031022: nuclear migration along microfilament	1.04E-03
41	GO:0080147: root hair cell development	1.39E-03
42	GO:0006537: glutamate biosynthetic process	1.50E-03
43	GO:0010731: protein glutathionylation	1.50E-03
44	GO:0071323: cellular response to chitin	1.50E-03
45	GO:0006986: response to unfolded protein	1.50E-03
46	GO:0055070: copper ion homeostasis	1.50E-03
47	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.50E-03
48	GO:0033617: mitochondrial respiratory chain complex IV assembly	1.50E-03
49	GO:0009902: chloroplast relocation	2.01E-03
50	GO:0010109: regulation of photosynthesis	2.01E-03
51	GO:0045088: regulation of innate immune response	2.01E-03
52	GO:0015713: phosphoglycerate transport	2.01E-03
53	GO:0009306: protein secretion	2.17E-03
54	GO:0006097: glyoxylate cycle	2.56E-03
55	GO:0009229: thiamine diphosphate biosynthetic process	2.56E-03
56	GO:0009435: NAD biosynthetic process	2.56E-03
57	GO:0018344: protein geranylgeranylation	2.56E-03
58	GO:0009247: glycolipid biosynthetic process	2.56E-03
59	GO:0045927: positive regulation of growth	2.56E-03
60	GO:0034052: positive regulation of plant-type hypersensitive response	2.56E-03
61	GO:0009737: response to abscisic acid	2.75E-03
62	GO:0009228: thiamine biosynthetic process	3.16E-03
63	GO:0033365: protein localization to organelle	3.16E-03
64	GO:0002238: response to molecule of fungal origin	3.16E-03
65	GO:0009643: photosynthetic acclimation	3.16E-03
66	GO:0009759: indole glucosinolate biosynthetic process	3.16E-03
67	GO:0010193: response to ozone	3.38E-03
68	GO:0031930: mitochondria-nucleus signaling pathway	3.81E-03
69	GO:0045926: negative regulation of growth	3.81E-03
70	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	3.81E-03
71	GO:0006464: cellular protein modification process	4.09E-03
72	GO:0006904: vesicle docking involved in exocytosis	4.35E-03
73	GO:1900057: positive regulation of leaf senescence	4.49E-03
74	GO:1902074: response to salt	4.49E-03
75	GO:0010044: response to aluminum ion	4.49E-03
76	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.49E-03
77	GO:0046470: phosphatidylcholine metabolic process	4.49E-03
78	GO:1900056: negative regulation of leaf senescence	4.49E-03
79	GO:0042742: defense response to bacterium	4.91E-03
80	GO:0010029: regulation of seed germination	5.16E-03
81	GO:0009850: auxin metabolic process	5.21E-03
82	GO:0019375: galactolipid biosynthetic process	5.21E-03
83	GO:0031540: regulation of anthocyanin biosynthetic process	5.21E-03
84	GO:0006102: isocitrate metabolic process	5.21E-03
85	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.21E-03
86	GO:0009790: embryo development	5.78E-03
87	GO:0010120: camalexin biosynthetic process	5.98E-03
88	GO:0010204: defense response signaling pathway, resistance gene-independent	5.98E-03
89	GO:0030968: endoplasmic reticulum unfolded protein response	5.98E-03
90	GO:0015780: nucleotide-sugar transport	6.77E-03
91	GO:0007338: single fertilization	6.77E-03
92	GO:0019432: triglyceride biosynthetic process	6.77E-03
93	GO:0006499: N-terminal protein myristoylation	7.03E-03
94	GO:0009753: response to jasmonic acid	7.58E-03
95	GO:0008202: steroid metabolic process	7.60E-03
96	GO:0043067: regulation of programmed cell death	7.60E-03
97	GO:0009086: methionine biosynthetic process	7.60E-03
98	GO:0009867: jasmonic acid mediated signaling pathway	8.08E-03
99	GO:0006470: protein dephosphorylation	8.48E-03
100	GO:0009870: defense response signaling pathway, resistance gene-dependent	8.48E-03
101	GO:0043069: negative regulation of programmed cell death	8.48E-03
102	GO:0007166: cell surface receptor signaling pathway	8.48E-03
103	GO:0010629: negative regulation of gene expression	8.48E-03
104	GO:0019684: photosynthesis, light reaction	9.38E-03
105	GO:0009089: lysine biosynthetic process via diaminopimelate	9.38E-03
106	GO:0000038: very long-chain fatty acid metabolic process	9.38E-03
107	GO:0006887: exocytosis	9.61E-03
108	GO:0000266: mitochondrial fission	1.03E-02
109	GO:0045037: protein import into chloroplast stroma	1.03E-02
110	GO:0006952: defense response	1.08E-02
111	GO:0006626: protein targeting to mitochondrion	1.13E-02
112	GO:0018107: peptidyl-threonine phosphorylation	1.13E-02
113	GO:0010102: lateral root morphogenesis	1.13E-02
114	GO:0006855: drug transmembrane transport	1.22E-02
115	GO:0031347: regulation of defense response	1.27E-02
116	GO:0006486: protein glycosylation	1.41E-02
117	GO:0034976: response to endoplasmic reticulum stress	1.44E-02
118	GO:0009414: response to water deprivation	1.48E-02
119	GO:0009723: response to ethylene	1.50E-02
120	GO:0009738: abscisic acid-activated signaling pathway	1.54E-02
121	GO:0000027: ribosomal large subunit assembly	1.55E-02
122	GO:0030150: protein import into mitochondrial matrix	1.55E-02
123	GO:0009626: plant-type hypersensitive response	1.78E-02
124	GO:0051321: meiotic cell cycle	1.78E-02
125	GO:0009814: defense response, incompatible interaction	1.90E-02
126	GO:0071456: cellular response to hypoxia	1.90E-02
127	GO:0018105: peptidyl-serine phosphorylation	2.07E-02
128	GO:0015031: protein transport	2.32E-02
129	GO:0055085: transmembrane transport	2.32E-02
130	GO:0006885: regulation of pH	2.53E-02
131	GO:0009749: response to glucose	2.80E-02
132	GO:0071554: cell wall organization or biogenesis	2.94E-02
133	GO:0002229: defense response to oomycetes	2.94E-02
134	GO:0032502: developmental process	3.08E-02
135	GO:0007264: small GTPase mediated signal transduction	3.08E-02
136	GO:0030163: protein catabolic process	3.22E-02
137	GO:0016036: cellular response to phosphate starvation	3.24E-02
138	GO:0009567: double fertilization forming a zygote and endosperm	3.37E-02
139	GO:0010150: leaf senescence	3.48E-02
140	GO:0009739: response to gibberellin	3.88E-02
141	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.97E-02
142	GO:0006906: vesicle fusion	4.13E-02
143	GO:0008380: RNA splicing	4.14E-02
144	GO:0006950: response to stress	4.29E-02
145	GO:0009407: toxin catabolic process	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0005212: structural constituent of eye lens	0.00E+00
2	GO:0050334: thiaminase activity	0.00E+00
3	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
4	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
5	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
6	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
7	GO:0008734: L-aspartate oxidase activity	0.00E+00
8	GO:0004865: protein serine/threonine phosphatase inhibitor activity	0.00E+00
9	GO:0004657: proline dehydrogenase activity	2.94E-04
10	GO:0047150: betaine-homocysteine S-methyltransferase activity	2.94E-04
11	GO:0046481: digalactosyldiacylglycerol synthase activity	2.94E-04
12	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.94E-04
13	GO:0004662: CAAX-protein geranylgeranyltransferase activity	2.94E-04
14	GO:0004630: phospholipase D activity	3.62E-04
15	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.62E-04
16	GO:0048531: beta-1,3-galactosyltransferase activity	6.45E-04
17	GO:0015036: disulfide oxidoreductase activity	6.45E-04
18	GO:0003994: aconitate hydratase activity	6.45E-04
19	GO:0015152: glucose-6-phosphate transmembrane transporter activity	6.45E-04
20	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	6.45E-04
21	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	6.45E-04
22	GO:0032934: sterol binding	6.45E-04
23	GO:0071917: triose-phosphate transmembrane transporter activity	1.04E-03
24	GO:0005457: GDP-fucose transmembrane transporter activity	1.04E-03
25	GO:0005509: calcium ion binding	1.26E-03
26	GO:0035250: UDP-galactosyltransferase activity	1.50E-03
27	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.50E-03
28	GO:0017077: oxidative phosphorylation uncoupler activity	1.50E-03
29	GO:0015120: phosphoglycerate transmembrane transporter activity	2.01E-03
30	GO:0004040: amidase activity	2.56E-03
31	GO:0005496: steroid binding	2.56E-03
32	GO:0043565: sequence-specific DNA binding	3.58E-03
33	GO:0004144: diacylglycerol O-acyltransferase activity	3.81E-03
34	GO:0004656: procollagen-proline 4-dioxygenase activity	3.81E-03
35	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.81E-03
36	GO:0102391: decanoate--CoA ligase activity	3.81E-03
37	GO:0004467: long-chain fatty acid-CoA ligase activity	4.49E-03
38	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.21E-03
39	GO:0008142: oxysterol binding	5.98E-03
40	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	6.37E-03
41	GO:0016740: transferase activity	6.42E-03
42	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.54E-03
43	GO:0015297: antiporter activity	6.74E-03
44	GO:0008194: UDP-glycosyltransferase activity	8.25E-03
45	GO:0016757: transferase activity, transferring glycosyl groups	8.25E-03
46	GO:0015020: glucuronosyltransferase activity	8.48E-03
47	GO:0004864: protein phosphatase inhibitor activity	8.48E-03
48	GO:0008559: xenobiotic-transporting ATPase activity	9.38E-03
49	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	9.71E-03
50	GO:0005315: inorganic phosphate transmembrane transporter activity	1.13E-02
51	GO:0005262: calcium channel activity	1.13E-02
52	GO:0015266: protein channel activity	1.13E-02
53	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.13E-02
54	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.20E-02
55	GO:0008061: chitin binding	1.33E-02
56	GO:0003712: transcription cofactor activity	1.33E-02
57	GO:0043531: ADP binding	1.40E-02
58	GO:0031418: L-ascorbic acid binding	1.55E-02
59	GO:0001046: core promoter sequence-specific DNA binding	1.55E-02
60	GO:0016874: ligase activity	1.89E-02
61	GO:0015035: protein disulfide oxidoreductase activity	2.07E-02
62	GO:0003756: protein disulfide isomerase activity	2.14E-02
63	GO:0004722: protein serine/threonine phosphatase activity	2.31E-02
64	GO:0005451: monovalent cation:proton antiporter activity	2.40E-02
65	GO:0015299: solute:proton antiporter activity	2.66E-02
66	GO:0004872: receptor activity	2.80E-02
67	GO:0015385: sodium:proton antiporter activity	3.22E-02
68	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.22E-02
69	GO:0005524: ATP binding	3.46E-02
70	GO:0008237: metallopeptidase activity	3.51E-02
71	GO:0008483: transaminase activity	3.51E-02
72	GO:0016413: O-acetyltransferase activity	3.66E-02
73	GO:0005515: protein binding	3.88E-02
74	GO:0008375: acetylglucosaminyltransferase activity	4.13E-02
75	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.13E-02
76	GO:0030247: polysaccharide binding	4.29E-02
77	GO:0004683: calmodulin-dependent protein kinase activity	4.29E-02
78	GO:0042802: identical protein binding	4.41E-02
79	GO:0015238: drug transmembrane transporter activity	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0000164: protein phosphatase type 1 complex	8.98E-05
2	GO:0005953: CAAX-protein geranylgeranyltransferase complex	2.94E-04
3	GO:0005743: mitochondrial inner membrane	3.31E-04
4	GO:0031314: extrinsic component of mitochondrial inner membrane	6.45E-04
5	GO:0016021: integral component of membrane	8.31E-04
6	GO:0031305: integral component of mitochondrial inner membrane	5.21E-03
7	GO:0000325: plant-type vacuole	7.37E-03
8	GO:0005774: vacuolar membrane	8.61E-03
9	GO:0048471: perinuclear region of cytoplasm	9.38E-03
10	GO:0005789: endoplasmic reticulum membrane	1.12E-02
11	GO:0030176: integral component of endoplasmic reticulum membrane	1.33E-02
12	GO:0005795: Golgi stack	1.33E-02
13	GO:0005635: nuclear envelope	1.51E-02
14	GO:0005741: mitochondrial outer membrane	1.78E-02
15	GO:0005783: endoplasmic reticulum	1.89E-02
16	GO:0031410: cytoplasmic vesicle	1.90E-02
17	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.14E-02
18	GO:0005794: Golgi apparatus	2.43E-02
19	GO:0009543: chloroplast thylakoid lumen	2.52E-02
20	GO:0005770: late endosome	2.53E-02
21	GO:0000139: Golgi membrane	2.58E-02
22	GO:0000145: exocyst	3.08E-02
23	GO:0071944: cell periphery	3.22E-02
24	GO:0005622: intracellular	3.79E-02
25	GO:0000151: ubiquitin ligase complex	4.61E-02
26	GO:0009707: chloroplast outer membrane	4.61E-02