Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G27240

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045176: apical protein localization0.00E+00
2GO:0043972: histone H3-K23 acetylation0.00E+00
3GO:0032212: positive regulation of telomere maintenance via telomerase0.00E+00
4GO:0032206: positive regulation of telomere maintenance0.00E+00
5GO:0044154: histone H3-K14 acetylation0.00E+00
6GO:0046474: glycerophospholipid biosynthetic process0.00E+00
7GO:0006436: tryptophanyl-tRNA aminoacylation1.52E-04
8GO:0000066: mitochondrial ornithine transport1.52E-04
9GO:0034757: negative regulation of iron ion transport1.52E-04
10GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process1.52E-04
11GO:0043971: histone H3-K18 acetylation1.52E-04
12GO:0019478: D-amino acid catabolic process1.52E-04
13GO:0010271: regulation of chlorophyll catabolic process3.47E-04
14GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation3.47E-04
15GO:0010540: basipetal auxin transport4.07E-04
16GO:0080117: secondary growth5.68E-04
17GO:0009800: cinnamic acid biosynthetic process8.13E-04
18GO:0010306: rhamnogalacturonan II biosynthetic process8.13E-04
19GO:0034059: response to anoxia8.13E-04
20GO:0015846: polyamine transport1.08E-03
21GO:0009956: radial pattern formation1.08E-03
22GO:0048868: pollen tube development1.09E-03
23GO:0031365: N-terminal protein amino acid modification1.36E-03
24GO:0010158: abaxial cell fate specification1.36E-03
25GO:0009696: salicylic acid metabolic process1.36E-03
26GO:0007264: small GTPase mediated signal transduction1.43E-03
27GO:0006655: phosphatidylglycerol biosynthetic process1.67E-03
28GO:0048831: regulation of shoot system development1.67E-03
29GO:0048827: phyllome development1.67E-03
30GO:0006559: L-phenylalanine catabolic process1.67E-03
31GO:0048509: regulation of meristem development2.01E-03
32GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity2.01E-03
33GO:0009610: response to symbiotic fungus2.36E-03
34GO:0010050: vegetative phase change2.36E-03
35GO:0000160: phosphorelay signal transduction system2.62E-03
36GO:0009850: auxin metabolic process2.73E-03
37GO:0048564: photosystem I assembly2.73E-03
38GO:0006353: DNA-templated transcription, termination2.73E-03
39GO:0032544: plastid translation3.12E-03
40GO:0044030: regulation of DNA methylation3.12E-03
41GO:0022900: electron transport chain3.12E-03
42GO:0009657: plastid organization3.12E-03
43GO:0000373: Group II intron splicing3.53E-03
44GO:0008202: steroid metabolic process3.96E-03
45GO:0000723: telomere maintenance3.96E-03
46GO:0006535: cysteine biosynthetic process from serine4.40E-03
47GO:0019538: protein metabolic process4.40E-03
48GO:0010582: floral meristem determinacy5.34E-03
49GO:0009736: cytokinin-activated signaling pathway5.45E-03
50GO:0010229: inflorescence development5.83E-03
51GO:0010020: chloroplast fission6.33E-03
52GO:0009933: meristem structural organization6.33E-03
53GO:0009825: multidimensional cell growth6.86E-03
54GO:0080188: RNA-directed DNA methylation6.86E-03
55GO:0006863: purine nucleobase transport7.40E-03
56GO:0006289: nucleotide-excision repair7.95E-03
57GO:0019344: cysteine biosynthetic process7.95E-03
58GO:0030150: protein import into mitochondrial matrix7.95E-03
59GO:0006418: tRNA aminoacylation for protein translation8.51E-03
60GO:0016226: iron-sulfur cluster assembly9.69E-03
61GO:0035428: hexose transmembrane transport9.69E-03
62GO:0071215: cellular response to abscisic acid stimulus1.03E-02
63GO:0070417: cellular response to cold1.16E-02
64GO:0010087: phloem or xylem histogenesis1.22E-02
65GO:0006633: fatty acid biosynthetic process1.22E-02
66GO:0046323: glucose import1.29E-02
67GO:0010305: leaf vascular tissue pattern formation1.29E-02
68GO:0009451: RNA modification1.38E-02
69GO:0048825: cotyledon development1.42E-02
70GO:0009416: response to light stimulus1.67E-02
71GO:0016126: sterol biosynthetic process1.94E-02
72GO:0009911: positive regulation of flower development1.94E-02
73GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.02E-02
74GO:0010029: regulation of seed germination2.02E-02
75GO:0009627: systemic acquired resistance2.10E-02
76GO:0010411: xyloglucan metabolic process2.18E-02
77GO:0048481: plant ovule development2.34E-02
78GO:0009817: defense response to fungus, incompatible interaction2.34E-02
79GO:0080167: response to karrikin2.59E-02
80GO:0007568: aging2.60E-02
81GO:0006839: mitochondrial transport3.05E-02
82GO:0009926: auxin polar transport3.32E-02
83GO:0042546: cell wall biogenesis3.42E-02
84GO:0009636: response to toxic substance3.61E-02
85GO:0009965: leaf morphogenesis3.61E-02
86GO:0006629: lipid metabolic process3.81E-02
87GO:0006364: rRNA processing4.11E-02
88GO:0009909: regulation of flower development4.42E-02
RankGO TermAdjusted P value
1GO:0019808: polyamine binding0.00E+00
2GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity0.00E+00
3GO:0080062: cytokinin 9-beta-glucosyltransferase activity1.52E-04
4GO:0004830: tryptophan-tRNA ligase activity1.52E-04
5GO:0047807: cytokinin 7-beta-glucosyltransferase activity1.52E-04
6GO:0008444: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity1.52E-04
7GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity1.52E-04
8GO:0017169: CDP-alcohol phosphatidyltransferase activity1.52E-04
9GO:0005290: L-histidine transmembrane transporter activity1.52E-04
10GO:0003924: GTPase activity3.06E-04
11GO:0050017: L-3-cyanoalanine synthase activity3.47E-04
12GO:0004047: aminomethyltransferase activity3.47E-04
13GO:0008805: carbon-monoxide oxygenase activity3.47E-04
14GO:0000064: L-ornithine transmembrane transporter activity3.47E-04
15GO:0009884: cytokinin receptor activity3.47E-04
16GO:0005034: osmosensor activity5.68E-04
17GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity5.68E-04
18GO:0045548: phenylalanine ammonia-lyase activity5.68E-04
19GO:0043424: protein histidine kinase binding6.20E-04
20GO:0043047: single-stranded telomeric DNA binding8.13E-04
21GO:0080031: methyl salicylate esterase activity8.13E-04
22GO:0015189: L-lysine transmembrane transporter activity8.13E-04
23GO:0000254: C-4 methylsterol oxidase activity8.13E-04
24GO:0015181: arginine transmembrane transporter activity8.13E-04
25GO:0070628: proteasome binding1.08E-03
26GO:0010385: double-stranded methylated DNA binding1.08E-03
27GO:0031593: polyubiquitin binding1.67E-03
28GO:0080030: methyl indole-3-acetate esterase activity1.67E-03
29GO:0019900: kinase binding2.01E-03
30GO:0004124: cysteine synthase activity2.01E-03
31GO:0005525: GTP binding2.04E-03
32GO:0019899: enzyme binding2.36E-03
33GO:0008235: metalloexopeptidase activity2.36E-03
34GO:0042162: telomeric DNA binding2.36E-03
35GO:0008142: oxysterol binding3.12E-03
36GO:0043621: protein self-association4.38E-03
37GO:0004673: protein histidine kinase activity4.40E-03
38GO:0008327: methyl-CpG binding4.86E-03
39GO:0004177: aminopeptidase activity4.86E-03
40GO:0000155: phosphorelay sensor kinase activity5.83E-03
41GO:0015266: protein channel activity5.83E-03
42GO:0042973: glucan endo-1,3-beta-D-glucosidase activity6.33E-03
43GO:0102337: 3-oxo-cerotoyl-CoA synthase activity7.40E-03
44GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity7.40E-03
45GO:0102336: 3-oxo-arachidoyl-CoA synthase activity7.40E-03
46GO:0043130: ubiquitin binding7.95E-03
47GO:0051087: chaperone binding8.51E-03
48GO:0005345: purine nucleobase transmembrane transporter activity8.51E-03
49GO:0019843: rRNA binding9.73E-03
50GO:0015144: carbohydrate transmembrane transporter activity1.16E-02
51GO:0004812: aminoacyl-tRNA ligase activity1.16E-02
52GO:0004402: histone acetyltransferase activity1.22E-02
53GO:0005351: sugar:proton symporter activity1.31E-02
54GO:0005355: glucose transmembrane transporter activity1.36E-02
55GO:0010181: FMN binding1.36E-02
56GO:0019901: protein kinase binding1.42E-02
57GO:0016762: xyloglucan:xyloglucosyl transferase activity1.50E-02
58GO:0004518: nuclease activity1.57E-02
59GO:0000156: phosphorelay response regulator activity1.64E-02
60GO:0042802: identical protein binding1.71E-02
61GO:0003684: damaged DNA binding1.71E-02
62GO:0016788: hydrolase activity, acting on ester bonds2.13E-02
63GO:0016798: hydrolase activity, acting on glycosyl bonds2.18E-02
64GO:0004806: triglyceride lipase activity2.18E-02
65GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.34E-02
66GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.37E-02
67GO:0005096: GTPase activator activity2.43E-02
68GO:0004693: cyclin-dependent protein serine/threonine kinase activity2.51E-02
69GO:0030145: manganese ion binding2.60E-02
70GO:0042393: histone binding3.05E-02
71GO:0042803: protein homodimerization activity3.24E-02
72GO:0004871: signal transducer activity3.24E-02
73GO:0051537: 2 iron, 2 sulfur cluster binding3.52E-02
74GO:0035091: phosphatidylinositol binding3.52E-02
75GO:0004519: endonuclease activity4.14E-02
76GO:0016298: lipase activity4.21E-02
77GO:0080043: quercetin 3-O-glucosyltransferase activity4.95E-02
78GO:0080044: quercetin 7-O-glucosyltransferase activity4.95E-02
RankGO TermAdjusted P value
1GO:0035452: extrinsic component of plastid membrane0.00E+00
2GO:0042597: periplasmic space0.00E+00
3GO:0010370: perinucleolar chromocenter1.52E-04
4GO:0005697: telomerase holoenzyme complex3.47E-04
5GO:0009507: chloroplast8.04E-04
6GO:0031305: integral component of mitochondrial inner membrane2.73E-03
7GO:0000784: nuclear chromosome, telomeric region3.12E-03
8GO:0031090: organelle membrane3.53E-03
9GO:0005720: nuclear heterochromatin3.53E-03
10GO:0009570: chloroplast stroma4.03E-03
11GO:0016602: CCAAT-binding factor complex5.83E-03
12GO:0009532: plastid stroma9.10E-03
13GO:0005744: mitochondrial inner membrane presequence translocase complex1.09E-02
14GO:0005770: late endosome1.29E-02
15GO:0009505: plant-type cell wall1.58E-02
16GO:0009707: chloroplast outer membrane2.34E-02
17GO:0005802: trans-Golgi network3.02E-02
18GO:0005768: endosome3.54E-02
19GO:0043231: intracellular membrane-bounded organelle4.20E-02
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Gene type



Gene DE type