Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G26520

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070979: protein K11-linked ubiquitination0.00E+00
2GO:2000505: regulation of energy homeostasis0.00E+00
3GO:0010081: regulation of inflorescence meristem growth0.00E+00
4GO:0090706: specification of plant organ position0.00E+00
5GO:0045176: apical protein localization0.00E+00
6GO:0071000: response to magnetism0.00E+00
7GO:0009583: detection of light stimulus0.00E+00
8GO:0010068: protoderm histogenesis0.00E+00
9GO:0000372: Group I intron splicing0.00E+00
10GO:0080127: fruit septum development0.00E+00
11GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
12GO:1905177: tracheary element differentiation0.00E+00
13GO:0000373: Group II intron splicing4.66E-08
14GO:1900865: chloroplast RNA modification4.31E-06
15GO:0010158: abaxial cell fate specification7.12E-06
16GO:0046620: regulation of organ growth5.04E-05
17GO:0010582: floral meristem determinacy2.34E-04
18GO:0009926: auxin polar transport2.35E-04
19GO:1902183: regulation of shoot apical meristem development3.12E-04
20GO:0016123: xanthophyll biosynthetic process3.12E-04
21GO:0010207: photosystem II assembly3.32E-04
22GO:0016554: cytidine to uridine editing4.36E-04
23GO:0009416: response to light stimulus4.50E-04
24GO:0009733: response to auxin5.33E-04
25GO:0072387: flavin adenine dinucleotide metabolic process6.40E-04
26GO:0043087: regulation of GTPase activity6.40E-04
27GO:2000021: regulation of ion homeostasis6.40E-04
28GO:0043609: regulation of carbon utilization6.40E-04
29GO:0006436: tryptophanyl-tRNA aminoacylation6.40E-04
30GO:0051247: positive regulation of protein metabolic process6.40E-04
31GO:0000066: mitochondrial ornithine transport6.40E-04
32GO:2000905: negative regulation of starch metabolic process6.40E-04
33GO:0010450: inflorescence meristem growth6.40E-04
34GO:0034757: negative regulation of iron ion transport6.40E-04
35GO:0009090: homoserine biosynthetic process6.40E-04
36GO:0043266: regulation of potassium ion transport6.40E-04
37GO:0010080: regulation of floral meristem growth6.40E-04
38GO:0051510: regulation of unidimensional cell growth7.40E-04
39GO:0048564: photosystem I assembly9.19E-04
40GO:0009657: plastid organization1.12E-03
41GO:0010087: phloem or xylem histogenesis1.13E-03
42GO:2000024: regulation of leaf development1.34E-03
43GO:0001736: establishment of planar polarity1.38E-03
44GO:0009786: regulation of asymmetric cell division1.38E-03
45GO:2000123: positive regulation of stomatal complex development1.38E-03
46GO:0010024: phytochromobilin biosynthetic process1.38E-03
47GO:0010343: singlet oxygen-mediated programmed cell death1.38E-03
48GO:1901529: positive regulation of anion channel activity1.38E-03
49GO:0060359: response to ammonium ion1.38E-03
50GO:0048255: mRNA stabilization1.38E-03
51GO:1900871: chloroplast mRNA modification1.38E-03
52GO:0010617: circadian regulation of calcium ion oscillation1.38E-03
53GO:0010271: regulation of chlorophyll catabolic process1.38E-03
54GO:0099402: plant organ development1.38E-03
55GO:0009086: methionine biosynthetic process1.58E-03
56GO:0048829: root cap development1.85E-03
57GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.97E-03
58GO:0043157: response to cation stress2.27E-03
59GO:0071398: cellular response to fatty acid2.27E-03
60GO:2001295: malonyl-CoA biosynthetic process2.27E-03
61GO:0045165: cell fate commitment2.27E-03
62GO:0045910: negative regulation of DNA recombination2.27E-03
63GO:1902448: positive regulation of shade avoidance2.27E-03
64GO:0080117: secondary growth2.27E-03
65GO:0048586: regulation of long-day photoperiodism, flowering2.27E-03
66GO:0006000: fructose metabolic process2.27E-03
67GO:0031145: anaphase-promoting complex-dependent catabolic process2.27E-03
68GO:0010022: meristem determinacy2.27E-03
69GO:0010623: programmed cell death involved in cell development2.27E-03
70GO:0080055: low-affinity nitrate transport2.27E-03
71GO:1901672: positive regulation of systemic acquired resistance2.27E-03
72GO:0009734: auxin-activated signaling pathway2.55E-03
73GO:0007166: cell surface receptor signaling pathway2.63E-03
74GO:0009725: response to hormone2.80E-03
75GO:0016556: mRNA modification3.30E-03
76GO:0046836: glycolipid transport3.30E-03
77GO:0009067: aspartate family amino acid biosynthetic process3.30E-03
78GO:0010371: regulation of gibberellin biosynthetic process3.30E-03
79GO:0051513: regulation of monopolar cell growth3.30E-03
80GO:0030071: regulation of mitotic metaphase/anaphase transition3.30E-03
81GO:0051639: actin filament network formation3.30E-03
82GO:0034059: response to anoxia3.30E-03
83GO:0010239: chloroplast mRNA processing3.30E-03
84GO:0009800: cinnamic acid biosynthetic process3.30E-03
85GO:0048645: animal organ formation3.30E-03
86GO:1901332: negative regulation of lateral root development3.30E-03
87GO:0042989: sequestering of actin monomers3.30E-03
88GO:1990019: protein storage vacuole organization3.30E-03
89GO:0005992: trehalose biosynthetic process4.39E-03
90GO:0009944: polarity specification of adaxial/abaxial axis4.39E-03
91GO:0051017: actin filament bundle assembly4.39E-03
92GO:0051781: positive regulation of cell division4.45E-03
93GO:0051764: actin crosslink formation4.45E-03
94GO:0009765: photosynthesis, light harvesting4.45E-03
95GO:2000306: positive regulation of photomorphogenesis4.45E-03
96GO:2000038: regulation of stomatal complex development4.45E-03
97GO:0010508: positive regulation of autophagy4.45E-03
98GO:1902347: response to strigolactone4.45E-03
99GO:0008295: spermidine biosynthetic process4.45E-03
100GO:0009793: embryo development ending in seed dormancy4.49E-03
101GO:0010431: seed maturation5.34E-03
102GO:0045487: gibberellin catabolic process5.72E-03
103GO:0048497: maintenance of floral organ identity5.72E-03
104GO:0032876: negative regulation of DNA endoreduplication5.72E-03
105GO:0080110: sporopollenin biosynthetic process5.72E-03
106GO:0010375: stomatal complex patterning5.72E-03
107GO:0030041: actin filament polymerization5.72E-03
108GO:0010117: photoprotection5.72E-03
109GO:0046283: anthocyanin-containing compound metabolic process5.72E-03
110GO:0016120: carotene biosynthetic process5.72E-03
111GO:0010236: plastoquinone biosynthetic process5.72E-03
112GO:0009831: plant-type cell wall modification involved in multidimensional cell growth6.39E-03
113GO:0048827: phyllome development7.10E-03
114GO:0009959: negative gravitropism7.10E-03
115GO:0006555: methionine metabolic process7.10E-03
116GO:0009913: epidermal cell differentiation7.10E-03
117GO:0060918: auxin transport7.10E-03
118GO:1902456: regulation of stomatal opening7.10E-03
119GO:0048831: regulation of shoot system development7.10E-03
120GO:0010190: cytochrome b6f complex assembly7.10E-03
121GO:0009920: cell plate formation involved in plant-type cell wall biogenesis7.10E-03
122GO:0003006: developmental process involved in reproduction7.10E-03
123GO:1901371: regulation of leaf morphogenesis7.10E-03
124GO:0006559: L-phenylalanine catabolic process7.10E-03
125GO:0016117: carotenoid biosynthetic process7.55E-03
126GO:0040008: regulation of growth7.75E-03
127GO:0009636: response to toxic substance8.01E-03
128GO:0010118: stomatal movement8.17E-03
129GO:0009088: threonine biosynthetic process8.58E-03
130GO:0010019: chloroplast-nucleus signaling pathway8.58E-03
131GO:0009648: photoperiodism8.58E-03
132GO:0010310: regulation of hydrogen peroxide metabolic process8.58E-03
133GO:0071333: cellular response to glucose stimulus8.58E-03
134GO:0042372: phylloquinone biosynthetic process8.58E-03
135GO:0010244: response to low fluence blue light stimulus by blue low-fluence system8.58E-03
136GO:0009942: longitudinal axis specification8.58E-03
137GO:0048509: regulation of meristem development8.58E-03
138GO:1901259: chloroplast rRNA processing8.58E-03
139GO:0030488: tRNA methylation8.58E-03
140GO:0009451: RNA modification8.62E-03
141GO:0009958: positive gravitropism8.81E-03
142GO:0010154: fruit development8.81E-03
143GO:0015693: magnesium ion transport1.02E-02
144GO:0006955: immune response1.02E-02
145GO:0010098: suspensor development1.02E-02
146GO:0010050: vegetative phase change1.02E-02
147GO:0048825: cotyledon development1.02E-02
148GO:0000302: response to reactive oxygen species1.09E-02
149GO:0010583: response to cyclopentenone1.17E-02
150GO:0009850: auxin metabolic process1.19E-02
151GO:0032875: regulation of DNA endoreduplication1.19E-02
152GO:0006353: DNA-templated transcription, termination1.19E-02
153GO:0070413: trehalose metabolism in response to stress1.19E-02
154GO:0048316: seed development1.31E-02
155GO:0009828: plant-type cell wall loosening1.33E-02
156GO:0010093: specification of floral organ identity1.36E-02
157GO:0006002: fructose 6-phosphate metabolic process1.36E-02
158GO:0010497: plasmodesmata-mediated intercellular transport1.36E-02
159GO:0007389: pattern specification process1.36E-02
160GO:0006397: mRNA processing1.39E-02
161GO:0007267: cell-cell signaling1.41E-02
162GO:0090305: nucleic acid phosphodiester bond hydrolysis1.55E-02
163GO:0048507: meristem development1.55E-02
164GO:0009911: positive regulation of flower development1.59E-02
165GO:0010029: regulation of seed germination1.68E-02
166GO:1900426: positive regulation of defense response to bacterium1.75E-02
167GO:0009638: phototropism1.75E-02
168GO:0042761: very long-chain fatty acid biosynthetic process1.75E-02
169GO:0035999: tetrahydrofolate interconversion1.75E-02
170GO:0010018: far-red light signaling pathway1.75E-02
171GO:0031425: chloroplast RNA processing1.75E-02
172GO:0010411: xyloglucan metabolic process1.87E-02
173GO:0009641: shade avoidance1.95E-02
174GO:0006298: mismatch repair1.95E-02
175GO:0016441: posttranscriptional gene silencing1.95E-02
176GO:0006949: syncytium formation1.95E-02
177GO:0010629: negative regulation of gene expression1.95E-02
178GO:0009299: mRNA transcription1.95E-02
179GO:0006535: cysteine biosynthetic process from serine1.95E-02
180GO:0018298: protein-chromophore linkage2.08E-02
181GO:0048765: root hair cell differentiation2.16E-02
182GO:0009089: lysine biosynthetic process via diaminopimelate2.16E-02
183GO:0006415: translational termination2.16E-02
184GO:0000160: phosphorelay signal transduction system2.18E-02
185GO:0010311: lateral root formation2.18E-02
186GO:0009845: seed germination2.33E-02
187GO:0045037: protein import into chloroplast stroma2.38E-02
188GO:0007568: aging2.40E-02
189GO:0010229: inflorescence development2.61E-02
190GO:0010075: regulation of meristem growth2.61E-02
191GO:0006094: gluconeogenesis2.61E-02
192GO:0030048: actin filament-based movement2.61E-02
193GO:0010588: cotyledon vascular tissue pattern formation2.61E-02
194GO:0009785: blue light signaling pathway2.61E-02
195GO:0010540: basipetal auxin transport2.84E-02
196GO:0048467: gynoecium development2.84E-02
197GO:0010020: chloroplast fission2.84E-02
198GO:0009933: meristem structural organization2.84E-02
199GO:0006839: mitochondrial transport3.01E-02
200GO:0090351: seedling development3.08E-02
201GO:0006631: fatty acid metabolic process3.13E-02
202GO:0010025: wax biosynthetic process3.33E-02
203GO:0042753: positive regulation of circadian rhythm3.33E-02
204GO:0006468: protein phosphorylation3.49E-02
205GO:0042546: cell wall biogenesis3.54E-02
206GO:2000377: regulation of reactive oxygen species metabolic process3.59E-02
207GO:0019344: cysteine biosynthetic process3.59E-02
208GO:0007010: cytoskeleton organization3.59E-02
209GO:0006418: tRNA aminoacylation for protein translation3.85E-02
210GO:0016998: cell wall macromolecule catabolic process4.12E-02
211GO:0003333: amino acid transmembrane transport4.12E-02
212GO:0009664: plant-type cell wall organization4.26E-02
213GO:0035428: hexose transmembrane transport4.39E-02
214GO:0006730: one-carbon metabolic process4.39E-02
215GO:0009736: cytokinin-activated signaling pathway4.57E-02
216GO:0071555: cell wall organization4.62E-02
217GO:0010082: regulation of root meristem growth4.67E-02
218GO:0009693: ethylene biosynthetic process4.67E-02
219GO:0071215: cellular response to abscisic acid stimulus4.67E-02
220GO:0009686: gibberellin biosynthetic process4.67E-02
221GO:0010089: xylem development4.95E-02
222GO:0010584: pollen exine formation4.95E-02
223GO:0006284: base-excision repair4.95E-02
224GO:0019722: calcium-mediated signaling4.95E-02
RankGO TermAdjusted P value
1GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor0.00E+00
2GO:0010355: homogentisate farnesyltransferase activity0.00E+00
3GO:0010356: homogentisate geranylgeranyltransferase activity0.00E+00
4GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity0.00E+00
5GO:0071633: dihydroceramidase activity0.00E+00
6GO:0010357: homogentisate solanesyltransferase activity0.00E+00
7GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
8GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
9GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
10GO:0045435: lycopene epsilon cyclase activity0.00E+00
11GO:0001872: (1->3)-beta-D-glucan binding1.22E-04
12GO:0004519: endonuclease activity4.24E-04
13GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.33E-04
14GO:0052624: 2-phytyl-1,4-naphthoquinone methyltransferase activity6.40E-04
15GO:0005227: calcium activated cation channel activity6.40E-04
16GO:0042834: peptidoglycan binding6.40E-04
17GO:0005290: L-histidine transmembrane transporter activity6.40E-04
18GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity6.40E-04
19GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity6.40E-04
20GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity6.40E-04
21GO:0004830: tryptophan-tRNA ligase activity6.40E-04
22GO:0050017: L-3-cyanoalanine synthase activity1.38E-03
23GO:0017118: lipoyltransferase activity1.38E-03
24GO:0045543: gibberellin 2-beta-dioxygenase activity1.38E-03
25GO:0043425: bHLH transcription factor binding1.38E-03
26GO:0004766: spermidine synthase activity1.38E-03
27GO:0000064: L-ornithine transmembrane transporter activity1.38E-03
28GO:0004412: homoserine dehydrogenase activity1.38E-03
29GO:0050736: O-malonyltransferase activity1.38E-03
30GO:0009884: cytokinin receptor activity1.38E-03
31GO:0004805: trehalose-phosphatase activity1.85E-03
32GO:0005034: osmosensor activity2.27E-03
33GO:0052692: raffinose alpha-galactosidase activity2.27E-03
34GO:0080054: low-affinity nitrate transmembrane transporter activity2.27E-03
35GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups2.27E-03
36GO:0045548: phenylalanine ammonia-lyase activity2.27E-03
37GO:0003913: DNA photolyase activity2.27E-03
38GO:0004148: dihydrolipoyl dehydrogenase activity2.27E-03
39GO:0004557: alpha-galactosidase activity2.27E-03
40GO:0004871: signal transducer activity2.90E-03
41GO:0009882: blue light photoreceptor activity3.30E-03
42GO:0004300: enoyl-CoA hydratase activity3.30E-03
43GO:0015189: L-lysine transmembrane transporter activity3.30E-03
44GO:0017089: glycolipid transporter activity3.30E-03
45GO:0004072: aspartate kinase activity3.30E-03
46GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity3.30E-03
47GO:0016149: translation release factor activity, codon specific3.30E-03
48GO:0015181: arginine transmembrane transporter activity3.30E-03
49GO:0010011: auxin binding4.45E-03
50GO:0051861: glycolipid binding4.45E-03
51GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed4.45E-03
52GO:0010328: auxin influx transmembrane transporter activity4.45E-03
53GO:0019199: transmembrane receptor protein kinase activity4.45E-03
54GO:0003723: RNA binding5.12E-03
55GO:0005471: ATP:ADP antiporter activity5.72E-03
56GO:0003989: acetyl-CoA carboxylase activity5.72E-03
57GO:0008725: DNA-3-methyladenine glycosylase activity5.72E-03
58GO:0003785: actin monomer binding5.72E-03
59GO:2001070: starch binding7.10E-03
60GO:0030983: mismatched DNA binding7.10E-03
61GO:0004709: MAP kinase kinase kinase activity7.10E-03
62GO:0004130: cytochrome-c peroxidase activity7.10E-03
63GO:0004462: lactoylglutathione lyase activity7.10E-03
64GO:0016688: L-ascorbate peroxidase activity7.10E-03
65GO:0043621: protein self-association7.62E-03
66GO:0019900: kinase binding8.58E-03
67GO:0004124: cysteine synthase activity8.58E-03
68GO:0004017: adenylate kinase activity8.58E-03
69GO:0009881: photoreceptor activity1.02E-02
70GO:0019901: protein kinase binding1.02E-02
71GO:0016762: xyloglucan:xyloglucosyl transferase activity1.09E-02
72GO:0004518: nuclease activity1.17E-02
73GO:0043022: ribosome binding1.19E-02
74GO:0051015: actin filament binding1.25E-02
75GO:0003724: RNA helicase activity1.36E-02
76GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.55E-02
77GO:0003747: translation release factor activity1.55E-02
78GO:0071949: FAD binding1.55E-02
79GO:0009672: auxin:proton symporter activity1.75E-02
80GO:0004672: protein kinase activity1.82E-02
81GO:0016798: hydrolase activity, acting on glycosyl bonds1.87E-02
82GO:0004721: phosphoprotein phosphatase activity1.87E-02
83GO:0030247: polysaccharide binding1.87E-02
84GO:0004673: protein histidine kinase activity1.95E-02
85GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.10E-02
86GO:0004161: dimethylallyltranstransferase activity2.16E-02
87GO:0005089: Rho guanyl-nucleotide exchange factor activity2.16E-02
88GO:0005096: GTPase activator activity2.18E-02
89GO:0016301: kinase activity2.36E-02
90GO:0050897: cobalt ion binding2.40E-02
91GO:0015095: magnesium ion transmembrane transporter activity2.61E-02
92GO:0000155: phosphorelay sensor kinase activity2.61E-02
93GO:0010329: auxin efflux transmembrane transporter activity2.61E-02
94GO:0003774: motor activity2.84E-02
95GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.84E-02
96GO:0005524: ATP binding2.91E-02
97GO:0008146: sulfotransferase activity3.08E-02
98GO:0102336: 3-oxo-arachidoyl-CoA synthase activity3.33E-02
99GO:0102337: 3-oxo-cerotoyl-CoA synthase activity3.33E-02
100GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity3.33E-02
101GO:0051536: iron-sulfur cluster binding3.59E-02
102GO:0031418: L-ascorbic acid binding3.59E-02
103GO:0005528: FK506 binding3.59E-02
104GO:0043424: protein histidine kinase binding3.85E-02
105GO:0003964: RNA-directed DNA polymerase activity4.12E-02
106GO:0042802: identical protein binding4.25E-02
107GO:0030570: pectate lyase activity4.67E-02
RankGO TermAdjusted P value
1GO:0035452: extrinsic component of plastid membrane0.00E+00
2GO:0009507: chloroplast5.93E-08
3GO:0009986: cell surface7.40E-04
4GO:0016604: nuclear body1.58E-03
5GO:0031969: chloroplast membrane1.84E-03
6GO:0005886: plasma membrane2.06E-03
7GO:0009317: acetyl-CoA carboxylase complex2.27E-03
8GO:0016605: PML body2.27E-03
9GO:0030139: endocytic vesicle2.27E-03
10GO:0009570: chloroplast stroma2.71E-03
11GO:0032585: multivesicular body membrane3.30E-03
12GO:0032432: actin filament bundle3.30E-03
13GO:0046658: anchored component of plasma membrane3.41E-03
14GO:0015629: actin cytoskeleton6.39E-03
15GO:0009535: chloroplast thylakoid membrane9.48E-03
16GO:0042807: central vacuole1.02E-02
17GO:0031225: anchored component of membrane1.10E-02
18GO:0000326: protein storage vacuole1.36E-02
19GO:0005680: anaphase-promoting complex1.55E-02
20GO:0010494: cytoplasmic stress granule1.55E-02
21GO:0030529: intracellular ribonucleoprotein complex1.59E-02
22GO:0016459: myosin complex1.95E-02
23GO:0005884: actin filament2.16E-02
24GO:0000311: plastid large ribosomal subunit2.38E-02
25GO:0005578: proteinaceous extracellular matrix2.61E-02
26GO:0009574: preprophase band2.61E-02
27GO:0005938: cell cortex2.61E-02
28GO:0030095: chloroplast photosystem II2.84E-02
29GO:0031977: thylakoid lumen3.13E-02
30GO:0005856: cytoskeleton3.82E-02
31GO:0009654: photosystem II oxygen evolving complex3.85E-02
32GO:0042651: thylakoid membrane3.85E-02
33GO:0009532: plastid stroma4.12E-02
34GO:0009579: thylakoid4.59E-02
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Gene type



Gene DE type