Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G25960

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006081: cellular aldehyde metabolic process7.77E-05
2GO:0071484: cellular response to light intensity1.17E-04
3GO:0006021: inositol biosynthetic process1.61E-04
4GO:0006536: glutamate metabolic process1.61E-04
5GO:0010117: photoprotection2.09E-04
6GO:0035434: copper ion transmembrane transport2.09E-04
7GO:0009972: cytidine deamination2.59E-04
8GO:0010264: myo-inositol hexakisphosphate biosynthetic process2.59E-04
9GO:0009644: response to high light intensity2.70E-04
10GO:0010189: vitamin E biosynthetic process3.11E-04
11GO:0008272: sulfate transport3.66E-04
12GO:0019827: stem cell population maintenance4.23E-04
13GO:0071482: cellular response to light stimulus4.82E-04
14GO:0010205: photoinhibition6.04E-04
15GO:0000038: very long-chain fatty acid metabolic process7.34E-04
16GO:0009698: phenylpropanoid metabolic process7.34E-04
17GO:0009773: photosynthetic electron transport in photosystem I7.34E-04
18GO:0006633: fatty acid biosynthetic process7.35E-04
19GO:0006094: gluconeogenesis8.70E-04
20GO:0006807: nitrogen compound metabolic process8.70E-04
21GO:0010143: cutin biosynthetic process9.39E-04
22GO:0010025: wax biosynthetic process1.08E-03
23GO:0006636: unsaturated fatty acid biosynthetic process1.08E-03
24GO:0006825: copper ion transport1.23E-03
25GO:0031408: oxylipin biosynthetic process1.31E-03
26GO:0080167: response to karrikin1.49E-03
27GO:0010118: stomatal movement1.73E-03
28GO:0042335: cuticle development1.73E-03
29GO:0048868: pollen tube development1.82E-03
30GO:0019252: starch biosynthetic process2.00E-03
31GO:0008654: phospholipid biosynthetic process2.00E-03
32GO:0016042: lipid catabolic process2.12E-03
33GO:0048235: pollen sperm cell differentiation2.18E-03
34GO:0051607: defense response to virus2.57E-03
35GO:0015995: chlorophyll biosynthetic process2.99E-03
36GO:0000160: phosphorelay signal transduction system3.31E-03
37GO:0010311: lateral root formation3.31E-03
38GO:0006631: fatty acid metabolic process4.23E-03
39GO:0042542: response to hydrogen peroxide4.35E-03
40GO:0051707: response to other organism4.47E-03
41GO:0009736: cytokinin-activated signaling pathway5.48E-03
42GO:0006857: oligopeptide transport5.74E-03
43GO:0006096: glycolytic process6.15E-03
44GO:0016036: cellular response to phosphate starvation9.74E-03
45GO:0007623: circadian rhythm1.02E-02
46GO:0010200: response to chitin1.66E-02
47GO:0015979: photosynthesis1.78E-02
48GO:0006869: lipid transport1.97E-02
49GO:0009408: response to heat2.14E-02
50GO:0048364: root development2.21E-02
51GO:0050832: defense response to fungus2.31E-02
52GO:0009735: response to cytokinin3.02E-02
53GO:0009416: response to light stimulus3.22E-02
RankGO TermAdjusted P value
1GO:0045550: geranylgeranyl reductase activity0.00E+00
2GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
3GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
4GO:0033840: NDP-glucose-starch glucosyltransferase activity0.00E+00
5GO:0031957: very long-chain fatty acid-CoA ligase activity1.67E-05
6GO:0008509: anion transmembrane transporter activity4.35E-05
7GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity4.35E-05
8GO:0004512: inositol-3-phosphate synthase activity4.35E-05
9GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity7.77E-05
10GO:0004373: glycogen (starch) synthase activity7.77E-05
11GO:0004351: glutamate decarboxylase activity1.17E-04
12GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.17E-04
13GO:0009011: starch synthase activity1.61E-04
14GO:0009922: fatty acid elongase activity2.09E-04
15GO:0004029: aldehyde dehydrogenase (NAD) activity2.59E-04
16GO:0004332: fructose-bisphosphate aldolase activity2.59E-04
17GO:0004126: cytidine deaminase activity3.11E-04
18GO:0102391: decanoate--CoA ligase activity3.11E-04
19GO:0004467: long-chain fatty acid-CoA ligase activity3.66E-04
20GO:0015140: malate transmembrane transporter activity3.66E-04
21GO:0005375: copper ion transmembrane transporter activity4.82E-04
22GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water4.82E-04
23GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity6.04E-04
24GO:0004565: beta-galactosidase activity8.70E-04
25GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.08E-03
26GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.08E-03
27GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.08E-03
28GO:0003954: NADH dehydrogenase activity1.16E-03
29GO:0016788: hydrolase activity, acting on ester bonds1.24E-03
30GO:0052689: carboxylic ester hydrolase activity1.65E-03
31GO:0000156: phosphorelay response regulator activity2.28E-03
32GO:0004185: serine-type carboxypeptidase activity4.47E-03
33GO:0016874: ligase activity6.70E-03
34GO:0016829: lyase activity8.63E-03
35GO:0030170: pyridoxal phosphate binding8.79E-03
36GO:0009055: electron carrier activity2.25E-02
37GO:0005515: protein binding2.27E-02
38GO:0008289: lipid binding2.71E-02
39GO:0005516: calmodulin binding4.31E-02
RankGO TermAdjusted P value
1GO:0031304: intrinsic component of mitochondrial inner membrane4.35E-05
2GO:0009569: chloroplast starch grain4.35E-05
3GO:0009534: chloroplast thylakoid4.81E-05
4GO:0031969: chloroplast membrane1.49E-03
5GO:0012505: endomembrane system6.84E-03
6GO:0009705: plant-type vacuole membrane1.02E-02
7GO:0005783: endoplasmic reticulum1.23E-02
8GO:0009507: chloroplast1.43E-02
9GO:0009535: chloroplast thylakoid membrane1.74E-02
10GO:0016020: membrane1.78E-02
11GO:0048046: apoplast2.83E-02
12GO:0005618: cell wall3.08E-02
13GO:0005777: peroxisome3.55E-02
14GO:0009941: chloroplast envelope3.65E-02
15GO:0009579: thylakoid3.66E-02
16GO:0005773: vacuole4.12E-02
17GO:0031225: anchored component of membrane4.42E-02
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Gene type



Gene DE type