co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G25640

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
2	GO:1902065: response to L-glutamate	3.37E-05
3	GO:1903648: positive regulation of chlorophyll catabolic process	3.37E-05
4	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	3.37E-05
5	GO:0009727: detection of ethylene stimulus	8.48E-05
6	GO:0080183: response to photooxidative stress	8.48E-05
7	GO:1901562: response to paraquat	1.47E-04
8	GO:0009738: abscisic acid-activated signaling pathway	1.62E-04
9	GO:0071323: cellular response to chitin	2.18E-04
10	GO:0022622: root system development	2.95E-04
11	GO:0045087: innate immune response	4.63E-04
12	GO:1900057: positive regulation of leaf senescence	6.47E-04
13	GO:0010044: response to aluminum ion	6.47E-04
14	GO:0042538: hyperosmotic salinity response	7.35E-04
15	GO:0045037: protein import into chloroplast stroma	1.40E-03
16	GO:0018107: peptidyl-threonine phosphorylation	1.52E-03
17	GO:0070588: calcium ion transmembrane transport	1.78E-03
18	GO:0009901: anther dehiscence	1.78E-03
19	GO:0055085: transmembrane transport	1.78E-03
20	GO:0034976: response to endoplasmic reticulum stress	1.91E-03
21	GO:0006470: protein dephosphorylation	2.12E-03
22	GO:0071369: cellular response to ethylene stimulus	2.63E-03
23	GO:0009306: protein secretion	2.78E-03
24	GO:0010584: pollen exine formation	2.78E-03
25	GO:0010197: polar nucleus fusion	3.25E-03
26	GO:0006623: protein targeting to vacuole	3.59E-03
27	GO:0016192: vesicle-mediated transport	3.71E-03
28	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	5.02E-03
29	GO:0010029: regulation of seed germination	5.02E-03
30	GO:0009408: response to heat	5.18E-03
31	GO:0008152: metabolic process	5.71E-03
32	GO:0006839: mitochondrial transport	7.47E-03
33	GO:0006897: endocytosis	7.69E-03
34	GO:0010114: response to red light	8.14E-03
35	GO:0000209: protein polyubiquitination	8.37E-03
36	GO:0009735: response to cytokinin	8.40E-03
37	GO:0031347: regulation of defense response	9.30E-03
38	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	9.30E-03
39	GO:0010224: response to UV-B	1.03E-02
40	GO:0006857: oligopeptide transport	1.05E-02
41	GO:0006096: glycolytic process	1.13E-02
42	GO:0018105: peptidyl-serine phosphorylation	1.31E-02
43	GO:0009845: seed germination	1.59E-02
44	GO:0010150: leaf senescence	1.89E-02
45	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.05E-02
46	GO:0007166: cell surface receptor signaling pathway	2.08E-02
47	GO:0015031: protein transport	2.38E-02
48	GO:0010200: response to chitin	3.08E-02
49	GO:0045454: cell redox homeostasis	3.42E-02
50	GO:0045892: negative regulation of transcription, DNA-templated	3.46E-02
51	GO:0006351: transcription, DNA-templated	3.50E-02
52	GO:0007275: multicellular organism development	3.67E-02
53	GO:0009737: response to abscisic acid	3.97E-02
54	GO:0009793: embryo development ending in seed dormancy	4.31E-02

Rank	GO Term	Adjusted P value
1	GO:0016530: metallochaperone activity	0.00E+00
2	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	8.48E-05
3	GO:0000975: regulatory region DNA binding	1.47E-04
4	GO:0046527: glucosyltransferase activity	2.95E-04
5	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.01E-03
6	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.01E-03
7	GO:0022857: transmembrane transporter activity	1.04E-03
8	GO:0030955: potassium ion binding	1.06E-03
9	GO:0004743: pyruvate kinase activity	1.06E-03
10	GO:0015198: oligopeptide transporter activity	1.40E-03
11	GO:0005388: calcium-transporting ATPase activity	1.52E-03
12	GO:0008061: chitin binding	1.78E-03
13	GO:0008194: UDP-glycosyltransferase activity	2.07E-03
14	GO:0004707: MAP kinase activity	2.33E-03
15	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.46E-03
16	GO:0004722: protein serine/threonine phosphatase activity	4.61E-03
17	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	5.79E-03
18	GO:0004222: metalloendopeptidase activity	6.20E-03
19	GO:0043565: sequence-specific DNA binding	6.26E-03
20	GO:0051537: 2 iron, 2 sulfur cluster binding	8.60E-03
21	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.26E-02
22	GO:0015035: protein disulfide oxidoreductase activity	1.31E-02
23	GO:0015144: carbohydrate transmembrane transporter activity	1.71E-02
24	GO:0005509: calcium ion binding	1.72E-02
25	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.80E-02
26	GO:0005351: sugar:proton symporter activity	1.86E-02
27	GO:0044212: transcription regulatory region DNA binding	1.87E-02
28	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.24E-02
29	GO:0005515: protein binding	2.35E-02
30	GO:0000287: magnesium ion binding	2.55E-02
31	GO:0005524: ATP binding	3.05E-02
32	GO:0061630: ubiquitin protein ligase activity	3.12E-02
33	GO:0042803: protein homodimerization activity	3.54E-02
34	GO:0016301: kinase activity	3.70E-02
35	GO:0016787: hydrolase activity	4.00E-02
36	GO:0009055: electron carrier activity	4.18E-02
37	GO:0046872: metal ion binding	4.33E-02

Rank	GO Term	Adjusted P value
1	GO:0031902: late endosome membrane	5.47E-04
2	GO:0043231: intracellular membrane-bounded organelle	7.38E-04
3	GO:0030665: clathrin-coated vesicle membrane	1.06E-03
4	GO:0017119: Golgi transport complex	1.17E-03
5	GO:0016592: mediator complex	3.93E-03
6	GO:0000139: Golgi membrane	4.72E-03
7	GO:0005788: endoplasmic reticulum lumen	5.02E-03
8	GO:0000325: plant-type vacuole	6.40E-03
9	GO:0005887: integral component of plasma membrane	7.03E-03
10	GO:0016021: integral component of membrane	1.02E-02
11	GO:0010008: endosome membrane	1.15E-02
12	GO:0016020: membrane	1.20E-02
13	GO:0009706: chloroplast inner membrane	1.28E-02
14	GO:0009543: chloroplast thylakoid lumen	1.51E-02
15	GO:0005789: endoplasmic reticulum membrane	2.86E-02
16	GO:0005783: endoplasmic reticulum	3.74E-02
17	GO:0005743: mitochondrial inner membrane	3.77E-02