co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G25390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032499: detection of peptidoglycan	0.00E+00
2	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
3	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
4	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
5	GO:0002764: immune response-regulating signaling pathway	0.00E+00
6	GO:0045730: respiratory burst	0.00E+00
7	GO:0035264: multicellular organism growth	0.00E+00
8	GO:0010200: response to chitin	9.71E-09
9	GO:0042742: defense response to bacterium	3.01E-07
10	GO:0009697: salicylic acid biosynthetic process	8.01E-07
11	GO:0006468: protein phosphorylation	1.22E-06
12	GO:0009626: plant-type hypersensitive response	3.96E-06
13	GO:0000187: activation of MAPK activity	2.89E-05
14	GO:0009617: response to bacterium	4.25E-05
15	GO:0060548: negative regulation of cell death	5.21E-05
16	GO:0010107: potassium ion import	5.21E-05
17	GO:0080142: regulation of salicylic acid biosynthetic process	5.21E-05
18	GO:0002237: response to molecule of bacterial origin	5.66E-05
19	GO:0070588: calcium ion transmembrane transport	6.79E-05
20	GO:0031348: negative regulation of defense response	1.44E-04
21	GO:0046777: protein autophosphorylation	1.61E-04
22	GO:2000037: regulation of stomatal complex patterning	1.64E-04
23	GO:0006952: defense response	1.96E-04
24	GO:1900056: negative regulation of leaf senescence	2.16E-04
25	GO:0010118: stomatal movement	2.31E-04
26	GO:0048482: plant ovule morphogenesis	2.80E-04
27	GO:0010365: positive regulation of ethylene biosynthetic process	2.80E-04
28	GO:0051938: L-glutamate import	2.80E-04
29	GO:0051245: negative regulation of cellular defense response	2.80E-04
30	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.80E-04
31	GO:0010941: regulation of cell death	2.80E-04
32	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.80E-04
33	GO:0051180: vitamin transport	2.80E-04
34	GO:0030974: thiamine pyrophosphate transport	2.80E-04
35	GO:0010045: response to nickel cation	2.80E-04
36	GO:0019673: GDP-mannose metabolic process	2.80E-04
37	GO:0032491: detection of molecule of fungal origin	2.80E-04
38	GO:0051865: protein autoubiquitination	4.05E-04
39	GO:0043069: negative regulation of programmed cell death	5.60E-04
40	GO:0046939: nucleotide phosphorylation	6.14E-04
41	GO:0015802: basic amino acid transport	6.14E-04
42	GO:0007584: response to nutrient	6.14E-04
43	GO:0015893: drug transport	6.14E-04
44	GO:0010042: response to manganese ion	6.14E-04
45	GO:0002221: pattern recognition receptor signaling pathway	6.14E-04
46	GO:0043091: L-arginine import	6.14E-04
47	GO:0008219: cell death	7.69E-04
48	GO:0010229: inflorescence development	8.37E-04
49	GO:0034605: cellular response to heat	9.39E-04
50	GO:0009738: abscisic acid-activated signaling pathway	9.82E-04
51	GO:0046621: negative regulation of organ growth	9.96E-04
52	GO:0048281: inflorescence morphogenesis	9.96E-04
53	GO:0010581: regulation of starch biosynthetic process	9.96E-04
54	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	9.96E-04
55	GO:0002230: positive regulation of defense response to virus by host	9.96E-04
56	GO:0016045: detection of bacterium	9.96E-04
57	GO:1900140: regulation of seedling development	9.96E-04
58	GO:0010359: regulation of anion channel activity	9.96E-04
59	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	9.96E-04
60	GO:0051176: positive regulation of sulfur metabolic process	9.96E-04
61	GO:0046713: borate transport	1.42E-03
62	GO:0072334: UDP-galactose transmembrane transport	1.42E-03
63	GO:0010306: rhamnogalacturonan II biosynthetic process	1.42E-03
64	GO:0006612: protein targeting to membrane	1.42E-03
65	GO:0015696: ammonium transport	1.42E-03
66	GO:0002679: respiratory burst involved in defense response	1.42E-03
67	GO:0071323: cellular response to chitin	1.42E-03
68	GO:0046836: glycolipid transport	1.42E-03
69	GO:0007166: cell surface receptor signaling pathway	1.52E-03
70	GO:0071456: cellular response to hypoxia	1.70E-03
71	GO:0009814: defense response, incompatible interaction	1.70E-03
72	GO:0016226: iron-sulfur cluster assembly	1.70E-03
73	GO:0050832: defense response to fungus	1.82E-03
74	GO:0010227: floral organ abscission	1.86E-03
75	GO:0046345: abscisic acid catabolic process	1.91E-03
76	GO:0010483: pollen tube reception	1.91E-03
77	GO:0072488: ammonium transmembrane transport	1.91E-03
78	GO:0010363: regulation of plant-type hypersensitive response	1.91E-03
79	GO:0071219: cellular response to molecule of bacterial origin	1.91E-03
80	GO:2000038: regulation of stomatal complex development	1.91E-03
81	GO:0010508: positive regulation of autophagy	1.91E-03
82	GO:0006486: protein glycosylation	2.07E-03
83	GO:0009737: response to abscisic acid	2.29E-03
84	GO:0010225: response to UV-C	2.43E-03
85	GO:0032957: inositol trisphosphate metabolic process	2.43E-03
86	GO:0045487: gibberellin catabolic process	2.43E-03
87	GO:0010117: photoprotection	2.43E-03
88	GO:0009620: response to fungus	2.88E-03
89	GO:0048317: seed morphogenesis	3.00E-03
90	GO:1900425: negative regulation of defense response to bacterium	3.00E-03
91	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.00E-03
92	GO:0046855: inositol phosphate dephosphorylation	3.00E-03
93	GO:0010405: arabinogalactan protein metabolic process	3.00E-03
94	GO:0002229: defense response to oomycetes	3.14E-03
95	GO:0006891: intra-Golgi vesicle-mediated transport	3.14E-03
96	GO:0016032: viral process	3.35E-03
97	GO:0009742: brassinosteroid mediated signaling pathway	3.49E-03
98	GO:0010555: response to mannitol	3.62E-03
99	GO:2000067: regulation of root morphogenesis	3.62E-03
100	GO:0042372: phylloquinone biosynthetic process	3.62E-03
101	GO:0010161: red light signaling pathway	4.26E-03
102	GO:0098869: cellular oxidant detoxification	4.26E-03
103	GO:0046470: phosphatidylcholine metabolic process	4.26E-03
104	GO:0070370: cellular heat acclimation	4.26E-03
105	GO:0010038: response to metal ion	4.26E-03
106	GO:0051607: defense response to virus	4.28E-03
107	GO:0035556: intracellular signal transduction	4.36E-03
108	GO:0009615: response to virus	4.53E-03
109	GO:0032875: regulation of DNA endoreduplication	4.95E-03
110	GO:0009808: lignin metabolic process	5.67E-03
111	GO:0010099: regulation of photomorphogenesis	5.67E-03
112	GO:0007186: G-protein coupled receptor signaling pathway	5.67E-03
113	GO:0048193: Golgi vesicle transport	5.67E-03
114	GO:0010204: defense response signaling pathway, resistance gene-independent	5.67E-03
115	GO:0007165: signal transduction	6.29E-03
116	GO:0009051: pentose-phosphate shunt, oxidative branch	6.43E-03
117	GO:0090333: regulation of stomatal closure	6.43E-03
118	GO:0010112: regulation of systemic acquired resistance	6.43E-03
119	GO:0009651: response to salt stress	6.69E-03
120	GO:0048354: mucilage biosynthetic process involved in seed coat development	7.22E-03
121	GO:0045087: innate immune response	7.49E-03
122	GO:0009409: response to cold	7.65E-03
123	GO:0007064: mitotic sister chromatid cohesion	8.04E-03
124	GO:0009870: defense response signaling pathway, resistance gene-dependent	8.04E-03
125	GO:0006032: chitin catabolic process	8.04E-03
126	GO:0046856: phosphatidylinositol dephosphorylation	8.90E-03
127	GO:0000272: polysaccharide catabolic process	8.90E-03
128	GO:0009750: response to fructose	8.90E-03
129	GO:0006887: exocytosis	8.91E-03
130	GO:0009744: response to sucrose	9.67E-03
131	GO:0008361: regulation of cell size	9.79E-03
132	GO:0012501: programmed cell death	9.79E-03
133	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	9.79E-03
134	GO:0055046: microgametogenesis	1.07E-02
135	GO:0009785: blue light signaling pathway	1.07E-02
136	GO:0006006: glucose metabolic process	1.07E-02
137	GO:0006855: drug transmembrane transport	1.13E-02
138	GO:0007034: vacuolar transport	1.17E-02
139	GO:0006446: regulation of translational initiation	1.17E-02
140	GO:0000165: MAPK cascade	1.17E-02
141	GO:0006970: response to osmotic stress	1.25E-02
142	GO:0009969: xyloglucan biosynthetic process	1.26E-02
143	GO:0042343: indole glucosinolate metabolic process	1.26E-02
144	GO:0090351: seedling development	1.26E-02
145	GO:0046854: phosphatidylinositol phosphorylation	1.26E-02
146	GO:0006979: response to oxidative stress	1.37E-02
147	GO:0009909: regulation of flower development	1.45E-02
148	GO:0009863: salicylic acid mediated signaling pathway	1.47E-02
149	GO:0009611: response to wounding	1.50E-02
150	GO:0009695: jasmonic acid biosynthetic process	1.58E-02
151	GO:0048511: rhythmic process	1.68E-02
152	GO:0098542: defense response to other organism	1.68E-02
153	GO:0048278: vesicle docking	1.68E-02
154	GO:0031408: oxylipin biosynthetic process	1.68E-02
155	GO:0003333: amino acid transmembrane transport	1.68E-02
156	GO:0016998: cell wall macromolecule catabolic process	1.68E-02
157	GO:0010017: red or far-red light signaling pathway	1.80E-02
158	GO:0009624: response to nematode	1.86E-02
159	GO:0045892: negative regulation of transcription, DNA-templated	1.91E-02
160	GO:0009686: gibberellin biosynthetic process	1.91E-02
161	GO:0019722: calcium-mediated signaling	2.03E-02
162	GO:0042147: retrograde transport, endosome to Golgi	2.15E-02
163	GO:0070417: cellular response to cold	2.15E-02
164	GO:0042391: regulation of membrane potential	2.27E-02
165	GO:0000271: polysaccharide biosynthetic process	2.27E-02
166	GO:0045489: pectin biosynthetic process	2.39E-02
167	GO:0009751: response to salicylic acid	2.39E-02
168	GO:0071472: cellular response to salt stress	2.39E-02
169	GO:0061025: membrane fusion	2.52E-02
170	GO:0009749: response to glucose	2.65E-02
171	GO:0008654: phospholipid biosynthetic process	2.65E-02
172	GO:0010193: response to ozone	2.78E-02
173	GO:0030163: protein catabolic process	3.05E-02
174	GO:0009639: response to red or far red light	3.19E-02
175	GO:0010150: leaf senescence	3.22E-02
176	GO:0006904: vesicle docking involved in exocytosis	3.33E-02
177	GO:0000910: cytokinesis	3.47E-02
178	GO:0009911: positive regulation of flower development	3.62E-02
179	GO:0001666: response to hypoxia	3.62E-02
180	GO:0006470: protein dephosphorylation	3.68E-02
181	GO:0009816: defense response to bacterium, incompatible interaction	3.76E-02
182	GO:0010468: regulation of gene expression	3.84E-02
183	GO:0009627: systemic acquired resistance	3.91E-02
184	GO:0006906: vesicle fusion	3.91E-02
185	GO:0009414: response to water deprivation	3.96E-02
186	GO:0048573: photoperiodism, flowering	4.06E-02
187	GO:0016049: cell growth	4.21E-02
188	GO:0009817: defense response to fungus, incompatible interaction	4.37E-02
189	GO:0009813: flavonoid biosynthetic process	4.52E-02
190	GO:0009832: plant-type cell wall biogenesis	4.52E-02
191	GO:0006499: N-terminal protein myristoylation	4.68E-02
192	GO:0009826: unidimensional cell growth	4.78E-02
193	GO:0010043: response to zinc ion	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0004168: dolichol kinase activity	0.00E+00
2	GO:2001080: chitosan binding	0.00E+00
3	GO:0016301: kinase activity	4.77E-08
4	GO:0004674: protein serine/threonine kinase activity	1.60E-06
5	GO:0005524: ATP binding	1.52E-05
6	GO:0005388: calcium-transporting ATPase activity	4.67E-05
7	GO:0019199: transmembrane receptor protein kinase activity	5.21E-05
8	GO:0043531: ADP binding	1.03E-04
9	GO:0033612: receptor serine/threonine kinase binding	1.26E-04
10	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.92E-04
11	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.73E-04
12	GO:0004708: MAP kinase kinase activity	2.73E-04
13	GO:0090422: thiamine pyrophosphate transporter activity	2.80E-04
14	GO:0015085: calcium ion transmembrane transporter activity	2.80E-04
15	GO:0080042: ADP-glucose pyrophosphohydrolase activity	2.80E-04
16	GO:0008446: GDP-mannose 4,6-dehydratase activity	2.80E-04
17	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.80E-04
18	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.80E-04
19	GO:0008909: isochorismate synthase activity	2.80E-04
20	GO:0031127: alpha-(1,2)-fucosyltransferase activity	2.80E-04
21	GO:0004672: protein kinase activity	2.83E-04
22	GO:0005515: protein binding	5.74E-04
23	GO:0080041: ADP-ribose pyrophosphohydrolase activity	6.14E-04
24	GO:0017110: nucleoside-diphosphatase activity	6.14E-04
25	GO:0001664: G-protein coupled receptor binding	9.96E-04
26	GO:0031683: G-protein beta/gamma-subunit complex binding	9.96E-04
27	GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity	9.96E-04
28	GO:0046423: allene-oxide cyclase activity	9.96E-04
29	GO:0016595: glutamate binding	9.96E-04
30	GO:0008061: chitin binding	1.05E-03
31	GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity	1.42E-03
32	GO:0015189: L-lysine transmembrane transporter activity	1.42E-03
33	GO:0017089: glycolipid transporter activity	1.42E-03
34	GO:0043424: protein histidine kinase binding	1.42E-03
35	GO:0019201: nucleotide kinase activity	1.42E-03
36	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.42E-03
37	GO:0004445: inositol-polyphosphate 5-phosphatase activity	1.42E-03
38	GO:0015181: arginine transmembrane transporter activity	1.42E-03
39	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.91E-03
40	GO:0051861: glycolipid binding	1.91E-03
41	GO:0005313: L-glutamate transmembrane transporter activity	1.91E-03
42	GO:0005516: calmodulin binding	2.35E-03
43	GO:0008234: cysteine-type peptidase activity	2.35E-03
44	GO:0045431: flavonol synthase activity	2.43E-03
45	GO:0010294: abscisic acid glucosyltransferase activity	2.43E-03
46	GO:0005459: UDP-galactose transmembrane transporter activity	2.43E-03
47	GO:0047631: ADP-ribose diphosphatase activity	2.43E-03
48	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.43E-03
49	GO:0008519: ammonium transmembrane transporter activity	3.00E-03
50	GO:0004605: phosphatidate cytidylyltransferase activity	3.00E-03
51	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.00E-03
52	GO:0000210: NAD+ diphosphatase activity	3.00E-03
53	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	3.00E-03
54	GO:0035252: UDP-xylosyltransferase activity	3.00E-03
55	GO:0005509: calcium ion binding	3.61E-03
56	GO:0004017: adenylate kinase activity	3.62E-03
57	GO:0004012: phospholipid-translocating ATPase activity	3.62E-03
58	GO:0019900: kinase binding	3.62E-03
59	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.03E-03
60	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	4.26E-03
61	GO:0004620: phospholipase activity	4.26E-03
62	GO:0052747: sinapyl alcohol dehydrogenase activity	4.95E-03
63	GO:0004630: phospholipase D activity	5.67E-03
64	GO:0005267: potassium channel activity	5.67E-03
65	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	5.67E-03
66	GO:0004430: 1-phosphatidylinositol 4-kinase activity	5.67E-03
67	GO:0015238: drug transmembrane transporter activity	6.21E-03
68	GO:0008417: fucosyltransferase activity	6.43E-03
69	GO:0071949: FAD binding	6.43E-03
70	GO:0015174: basic amino acid transmembrane transporter activity	7.22E-03
71	GO:0004568: chitinase activity	8.04E-03
72	GO:0008047: enzyme activator activity	8.04E-03
73	GO:0004713: protein tyrosine kinase activity	8.04E-03
74	GO:0047372: acylglycerol lipase activity	8.90E-03
75	GO:0005525: GTP binding	9.46E-03
76	GO:0008378: galactosyltransferase activity	9.79E-03
77	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	9.79E-03
78	GO:0045551: cinnamyl-alcohol dehydrogenase activity	9.79E-03
79	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.07E-02
80	GO:0004190: aspartic-type endopeptidase activity	1.26E-02
81	GO:0030552: cAMP binding	1.26E-02
82	GO:0030553: cGMP binding	1.26E-02
83	GO:0043130: ubiquitin binding	1.47E-02
84	GO:0005216: ion channel activity	1.58E-02
85	GO:0004707: MAP kinase activity	1.68E-02
86	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.68E-02
87	GO:0043565: sequence-specific DNA binding	1.77E-02
88	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.80E-02
89	GO:0005249: voltage-gated potassium channel activity	2.27E-02
90	GO:0030551: cyclic nucleotide binding	2.27E-02
91	GO:0016758: transferase activity, transferring hexosyl groups	2.27E-02
92	GO:0003713: transcription coactivator activity	2.39E-02
93	GO:0003924: GTPase activity	2.44E-02
94	GO:0004197: cysteine-type endopeptidase activity	2.91E-02
95	GO:0015297: antiporter activity	3.08E-02
96	GO:0008375: acetylglucosaminyltransferase activity	3.91E-02
97	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.91E-02
98	GO:0004683: calmodulin-dependent protein kinase activity	4.06E-02
99	GO:0004806: triglyceride lipase activity	4.06E-02
100	GO:0004721: phosphoprotein phosphatase activity	4.06E-02
101	GO:0016757: transferase activity, transferring glycosyl groups	4.36E-02
102	GO:0005215: transporter activity	4.73E-02
103	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.78E-08
2	GO:0005901: caveola	6.14E-04
3	GO:0030176: integral component of endoplasmic reticulum membrane	1.05E-03
4	GO:0016021: integral component of membrane	1.17E-03
5	GO:0012505: endomembrane system	3.12E-03
6	GO:0030173: integral component of Golgi membrane	3.62E-03
7	GO:0005887: integral component of plasma membrane	9.66E-03
8	GO:0005795: Golgi stack	1.26E-02
9	GO:0043234: protein complex	1.37E-02
10	GO:0005758: mitochondrial intermembrane space	1.47E-02
11	GO:0010008: endosome membrane	1.60E-02
12	GO:0009504: cell plate	2.65E-02
13	GO:0043231: intracellular membrane-bounded organelle	2.75E-02
14	GO:0000145: exocyst	2.91E-02
15	GO:0032580: Golgi cisterna membrane	3.19E-02
16	GO:0005794: Golgi apparatus	3.83E-02
17	GO:0005737: cytoplasm	4.06E-02
18	GO:0016020: membrane	4.52E-02