GO Enrichment Analysis of Co-expressed Genes with
AT4G25080
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 2 | GO:0051775: response to redox state | 3.25E-05 |
| 3 | GO:0000481: maturation of 5S rRNA | 3.25E-05 |
| 4 | GO:0042371: vitamin K biosynthetic process | 3.25E-05 |
| 5 | GO:0071461: cellular response to redox state | 3.25E-05 |
| 6 | GO:0034337: RNA folding | 3.25E-05 |
| 7 | GO:0009629: response to gravity | 8.18E-05 |
| 8 | GO:0080005: photosystem stoichiometry adjustment | 8.18E-05 |
| 9 | GO:0010541: acropetal auxin transport | 8.18E-05 |
| 10 | GO:0010160: formation of animal organ boundary | 1.42E-04 |
| 11 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 2.11E-04 |
| 12 | GO:0010731: protein glutathionylation | 2.11E-04 |
| 13 | GO:2001141: regulation of RNA biosynthetic process | 2.11E-04 |
| 14 | GO:0006107: oxaloacetate metabolic process | 2.11E-04 |
| 15 | GO:2000122: negative regulation of stomatal complex development | 2.85E-04 |
| 16 | GO:0006546: glycine catabolic process | 2.85E-04 |
| 17 | GO:0006734: NADH metabolic process | 2.85E-04 |
| 18 | GO:0015995: chlorophyll biosynthetic process | 3.15E-04 |
| 19 | GO:0010375: stomatal complex patterning | 3.65E-04 |
| 20 | GO:0043097: pyrimidine nucleoside salvage | 3.65E-04 |
| 21 | GO:0009107: lipoate biosynthetic process | 3.65E-04 |
| 22 | GO:0015979: photosynthesis | 4.45E-04 |
| 23 | GO:0006206: pyrimidine nucleobase metabolic process | 4.48E-04 |
| 24 | GO:0060918: auxin transport | 4.48E-04 |
| 25 | GO:0050665: hydrogen peroxide biosynthetic process | 4.48E-04 |
| 26 | GO:0009854: oxidative photosynthetic carbon pathway | 5.36E-04 |
| 27 | GO:0010019: chloroplast-nucleus signaling pathway | 5.36E-04 |
| 28 | GO:0009926: auxin polar transport | 5.65E-04 |
| 29 | GO:0009645: response to low light intensity stimulus | 6.27E-04 |
| 30 | GO:0006400: tRNA modification | 6.27E-04 |
| 31 | GO:0010374: stomatal complex development | 6.27E-04 |
| 32 | GO:0006605: protein targeting | 7.22E-04 |
| 33 | GO:0032508: DNA duplex unwinding | 7.22E-04 |
| 34 | GO:0031540: regulation of anthocyanin biosynthetic process | 7.22E-04 |
| 35 | GO:0010052: guard cell differentiation | 8.20E-04 |
| 36 | GO:0010204: defense response signaling pathway, resistance gene-independent | 8.20E-04 |
| 37 | GO:0017004: cytochrome complex assembly | 8.20E-04 |
| 38 | GO:0071482: cellular response to light stimulus | 8.20E-04 |
| 39 | GO:0006754: ATP biosynthetic process | 9.20E-04 |
| 40 | GO:0043069: negative regulation of programmed cell death | 1.13E-03 |
| 41 | GO:0043085: positive regulation of catalytic activity | 1.24E-03 |
| 42 | GO:0006352: DNA-templated transcription, initiation | 1.24E-03 |
| 43 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.24E-03 |
| 44 | GO:0008361: regulation of cell size | 1.36E-03 |
| 45 | GO:0006108: malate metabolic process | 1.47E-03 |
| 46 | GO:0019253: reductive pentose-phosphate cycle | 1.60E-03 |
| 47 | GO:0010540: basipetal auxin transport | 1.60E-03 |
| 48 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.12E-03 |
| 49 | GO:0010073: meristem maintenance | 2.12E-03 |
| 50 | GO:0030245: cellulose catabolic process | 2.40E-03 |
| 51 | GO:0048443: stamen development | 2.69E-03 |
| 52 | GO:0009306: protein secretion | 2.69E-03 |
| 53 | GO:0009958: positive gravitropism | 3.15E-03 |
| 54 | GO:0009639: response to red or far red light | 4.14E-03 |
| 55 | GO:0009409: response to cold | 4.43E-03 |
| 56 | GO:0010027: thylakoid membrane organization | 4.67E-03 |
| 57 | GO:0009627: systemic acquired resistance | 5.04E-03 |
| 58 | GO:0005975: carbohydrate metabolic process | 5.12E-03 |
| 59 | GO:0018298: protein-chromophore linkage | 5.60E-03 |
| 60 | GO:0009813: flavonoid biosynthetic process | 5.80E-03 |
| 61 | GO:0010218: response to far red light | 5.99E-03 |
| 62 | GO:0048527: lateral root development | 6.19E-03 |
| 63 | GO:0009637: response to blue light | 6.60E-03 |
| 64 | GO:0006099: tricarboxylic acid cycle | 6.80E-03 |
| 65 | GO:0006631: fatty acid metabolic process | 7.43E-03 |
| 66 | GO:0009640: photomorphogenesis | 7.87E-03 |
| 67 | GO:0009735: response to cytokinin | 8.00E-03 |
| 68 | GO:0009644: response to high light intensity | 8.31E-03 |
| 69 | GO:0009636: response to toxic substance | 8.53E-03 |
| 70 | GO:0016310: phosphorylation | 9.42E-03 |
| 71 | GO:0010224: response to UV-B | 9.93E-03 |
| 72 | GO:0009058: biosynthetic process | 1.51E-02 |
| 73 | GO:0006633: fatty acid biosynthetic process | 1.71E-02 |
| 74 | GO:0042742: defense response to bacterium | 1.78E-02 |
| 75 | GO:0071555: cell wall organization | 1.78E-02 |
| 76 | GO:0009733: response to auxin | 2.00E-02 |
| 77 | GO:0009658: chloroplast organization | 2.50E-02 |
| 78 | GO:0006869: lipid transport | 3.53E-02 |
| 79 | GO:0016042: lipid catabolic process | 3.76E-02 |
| 80 | GO:0048364: root development | 3.96E-02 |
| 81 | GO:0009753: response to jasmonic acid | 4.04E-02 |
| 82 | GO:0009734: auxin-activated signaling pathway | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 3 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 4 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 5 | GO:0080132: fatty acid alpha-hydroxylase activity | 3.25E-05 |
| 6 | GO:0008746: NAD(P)+ transhydrogenase activity | 3.25E-05 |
| 7 | GO:0004328: formamidase activity | 3.25E-05 |
| 8 | GO:0046906: tetrapyrrole binding | 3.25E-05 |
| 9 | GO:0004047: aminomethyltransferase activity | 8.18E-05 |
| 10 | GO:0016992: lipoate synthase activity | 1.42E-04 |
| 11 | GO:0016851: magnesium chelatase activity | 2.11E-04 |
| 12 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 2.11E-04 |
| 13 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 2.11E-04 |
| 14 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 2.11E-04 |
| 15 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 2.11E-04 |
| 16 | GO:0016987: sigma factor activity | 2.85E-04 |
| 17 | GO:0008891: glycolate oxidase activity | 2.85E-04 |
| 18 | GO:0001053: plastid sigma factor activity | 2.85E-04 |
| 19 | GO:0016615: malate dehydrogenase activity | 4.48E-04 |
| 20 | GO:0030060: L-malate dehydrogenase activity | 5.36E-04 |
| 21 | GO:0004849: uridine kinase activity | 5.36E-04 |
| 22 | GO:0019899: enzyme binding | 6.27E-04 |
| 23 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 9.20E-04 |
| 24 | GO:0016887: ATPase activity | 1.06E-03 |
| 25 | GO:0004565: beta-galactosidase activity | 1.47E-03 |
| 26 | GO:0010329: auxin efflux transmembrane transporter activity | 1.47E-03 |
| 27 | GO:0031409: pigment binding | 1.85E-03 |
| 28 | GO:0005528: FK506 binding | 1.99E-03 |
| 29 | GO:0008810: cellulase activity | 2.55E-03 |
| 30 | GO:0010181: FMN binding | 3.31E-03 |
| 31 | GO:0016491: oxidoreductase activity | 4.28E-03 |
| 32 | GO:0008483: transaminase activity | 4.32E-03 |
| 33 | GO:0016168: chlorophyll binding | 4.85E-03 |
| 34 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 5.60E-03 |
| 35 | GO:0004364: glutathione transferase activity | 7.65E-03 |
| 36 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.76E-03 |
| 37 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 9.69E-03 |
| 38 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.16E-02 |
| 39 | GO:0004650: polygalacturonase activity | 1.17E-02 |
| 40 | GO:0003824: catalytic activity | 1.95E-02 |
| 41 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.17E-02 |
| 42 | GO:0016788: hydrolase activity, acting on ester bonds | 2.53E-02 |
| 43 | GO:0003729: mRNA binding | 2.65E-02 |
| 44 | GO:0005524: ATP binding | 2.75E-02 |
| 45 | GO:0052689: carboxylic ester hydrolase activity | 3.12E-02 |
| 46 | GO:0042803: protein homodimerization activity | 3.42E-02 |
| 47 | GO:0009055: electron carrier activity | 4.04E-02 |
| 48 | GO:0008289: lipid binding | 4.85E-02 |
| 49 | GO:0005515: protein binding | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 7.11E-08 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 2.36E-07 |
| 3 | GO:0009782: photosystem I antenna complex | 3.25E-05 |
| 4 | GO:0009570: chloroplast stroma | 9.26E-05 |
| 5 | GO:0010007: magnesium chelatase complex | 1.42E-04 |
| 6 | GO:0031977: thylakoid lumen | 5.22E-04 |
| 7 | GO:0048046: apoplast | 7.44E-04 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.30E-03 |
| 9 | GO:0032040: small-subunit processome | 1.36E-03 |
| 10 | GO:0009579: thylakoid | 1.56E-03 |
| 11 | GO:0030076: light-harvesting complex | 1.72E-03 |
| 12 | GO:0009522: photosystem I | 3.31E-03 |
| 13 | GO:0010319: stromule | 4.32E-03 |
| 14 | GO:0009941: chloroplast envelope | 5.11E-03 |
| 15 | GO:0005777: peroxisome | 1.01E-02 |
| 16 | GO:0031225: anchored component of membrane | 1.37E-02 |
| 17 | GO:0010287: plastoglobule | 1.40E-02 |
| 18 | GO:0009705: plant-type vacuole membrane | 1.83E-02 |
| 19 | GO:0046658: anchored component of plasma membrane | 2.23E-02 |
| 20 | GO:0016020: membrane | 2.91E-02 |
| 21 | GO:0031969: chloroplast membrane | 2.91E-02 |
| 22 | GO:0005783: endoplasmic reticulum | 3.52E-02 |