Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G25000

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006793: phosphorus metabolic process0.00E+00
2GO:0006073: cellular glucan metabolic process0.00E+00
3GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
4GO:0001881: receptor recycling0.00E+00
5GO:0006593: ornithine catabolic process0.00E+00
6GO:0019544: arginine catabolic process to glutamate6.06E-06
7GO:0045905: positive regulation of translational termination1.65E-05
8GO:0051592: response to calcium ion1.65E-05
9GO:0045901: positive regulation of translational elongation1.65E-05
10GO:0006452: translational frameshifting1.65E-05
11GO:0010351: lithium ion transport3.04E-05
12GO:0008333: endosome to lysosome transport3.04E-05
13GO:0051646: mitochondrion localization3.04E-05
14GO:0006882: cellular zinc ion homeostasis4.72E-05
15GO:0006561: proline biosynthetic process1.10E-04
16GO:0030026: cellular manganese ion homeostasis1.60E-04
17GO:0006744: ubiquinone biosynthetic process1.60E-04
18GO:0015996: chlorophyll catabolic process2.14E-04
19GO:0055062: phosphate ion homeostasis3.02E-04
20GO:0007034: vacuolar transport4.30E-04
21GO:0000162: tryptophan biosynthetic process4.98E-04
22GO:0006874: cellular calcium ion homeostasis5.68E-04
23GO:0042147: retrograde transport, endosome to Golgi7.52E-04
24GO:0006814: sodium ion transport8.70E-04
25GO:0006623: protein targeting to vacuole9.08E-04
26GO:0009816: defense response to bacterium, incompatible interaction1.25E-03
27GO:0010411: xyloglucan metabolic process1.34E-03
28GO:0006099: tricarboxylic acid cycle1.72E-03
29GO:0006839: mitochondrial transport1.82E-03
30GO:0006631: fatty acid metabolic process1.87E-03
31GO:0042546: cell wall biogenesis2.03E-03
32GO:0006812: cation transport2.30E-03
33GO:0042538: hyperosmotic salinity response2.30E-03
34GO:0009626: plant-type hypersensitive response2.82E-03
35GO:0009624: response to nematode3.06E-03
36GO:0006413: translational initiation4.23E-03
37GO:0009651: response to salt stress7.58E-03
38GO:0071555: cell wall organization2.25E-02
39GO:0006810: transport2.97E-02
40GO:0046686: response to cadmium ion3.10E-02
RankGO TermAdjusted P value
1GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity0.00E+00
2GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
3GO:0016405: CoA-ligase activity0.00E+00
4GO:0080124: pheophytinase activity0.00E+00
5GO:0004048: anthranilate phosphoribosyltransferase activity6.06E-06
6GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity6.06E-06
7GO:0004566: beta-glucuronidase activity1.65E-05
8GO:0016798: hydrolase activity, acting on glycosyl bonds3.28E-05
9GO:0004108: citrate (Si)-synthase activity4.72E-05
10GO:0015368: calcium:cation antiporter activity6.61E-05
11GO:0015369: calcium:proton antiporter activity6.61E-05
12GO:0043022: ribosome binding1.86E-04
13GO:0015491: cation:cation antiporter activity1.86E-04
14GO:0016207: 4-coumarate-CoA ligase activity2.43E-04
15GO:0015114: phosphate ion transmembrane transporter activity3.97E-04
16GO:0016762: xyloglucan:xyloglucosyl transferase activity9.49E-04
17GO:0003746: translation elongation factor activity1.67E-03
18GO:0030170: pyridoxal phosphate binding3.82E-03
19GO:0003743: translation initiation factor activity4.93E-03
20GO:0042802: identical protein binding5.22E-03
21GO:0004722: protein serine/threonine phosphatase activity8.39E-03
22GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.66E-02
23GO:0016491: oxidoreductase activity2.75E-02
24GO:0004672: protein kinase activity2.97E-02
25GO:0016787: hydrolase activity3.89E-02
RankGO TermAdjusted P value
1GO:0005777: peroxisome9.60E-05
2GO:0005771: multivesicular body1.10E-04
3GO:0030904: retromer complex1.10E-04
4GO:0005759: mitochondrial matrix2.19E-04
5GO:0005765: lysosomal membrane3.33E-04
6GO:0005774: vacuolar membrane1.04E-03
7GO:0005618: cell wall1.22E-03
8GO:0031902: late endosome membrane1.87E-03
9GO:0009705: plant-type vacuole membrane4.43E-03
10GO:0009507: chloroplast4.47E-03
11GO:0016020: membrane7.98E-03
12GO:0048046: apoplast8.22E-03
13GO:0005743: mitochondrial inner membrane8.66E-03
14GO:0043231: intracellular membrane-bounded organelle9.75E-03
15GO:0009570: chloroplast stroma1.49E-02
16GO:0009536: plastid2.61E-02
17GO:0009505: plant-type cell wall2.65E-02
18GO:0009535: chloroplast thylakoid membrane4.01E-02
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Gene type



Gene DE type