Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G24200

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000630: positive regulation of miRNA metabolic process0.00E+00
2GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
3GO:2000636: positive regulation of primary miRNA processing0.00E+00
4GO:0010324: membrane invagination0.00E+00
5GO:0009225: nucleotide-sugar metabolic process1.33E-05
6GO:0045227: capsule polysaccharide biosynthetic process1.51E-05
7GO:0033358: UDP-L-arabinose biosynthetic process1.51E-05
8GO:0071456: cellular response to hypoxia3.07E-05
9GO:0006012: galactose metabolic process3.54E-05
10GO:0009643: photosynthetic acclimation3.71E-05
11GO:0048508: embryonic meristem development1.35E-04
12GO:0015760: glucose-6-phosphate transport1.35E-04
13GO:0046256: 2,4,6-trinitrotoluene catabolic process1.35E-04
14GO:0019567: arabinose biosynthetic process1.35E-04
15GO:0019305: dTDP-rhamnose biosynthetic process1.35E-04
16GO:0006527: arginine catabolic process3.11E-04
17GO:0044419: interspecies interaction between organisms3.11E-04
18GO:0009945: radial axis specification3.11E-04
19GO:0015712: hexose phosphate transport3.11E-04
20GO:0009446: putrescine biosynthetic process3.11E-04
21GO:0009636: response to toxic substance4.56E-04
22GO:2000377: regulation of reactive oxygen species metabolic process4.84E-04
23GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway5.13E-04
24GO:0015714: phosphoenolpyruvate transport5.13E-04
25GO:1900055: regulation of leaf senescence5.13E-04
26GO:0006954: inflammatory response5.13E-04
27GO:0035436: triose phosphate transmembrane transport5.13E-04
28GO:0045836: positive regulation of meiotic nuclear division5.13E-04
29GO:0042391: regulation of membrane potential8.75E-04
30GO:0033320: UDP-D-xylose biosynthetic process9.73E-04
31GO:0015713: phosphoglycerate transport9.73E-04
32GO:0008295: spermidine biosynthetic process9.73E-04
33GO:0009694: jasmonic acid metabolic process9.73E-04
34GO:0010109: regulation of photosynthesis9.73E-04
35GO:0009409: response to cold9.87E-04
36GO:0009749: response to glucose1.08E-03
37GO:0045927: positive regulation of growth1.23E-03
38GO:0034052: positive regulation of plant-type hypersensitive response1.23E-03
39GO:0009753: response to jasmonic acid1.40E-03
40GO:0042732: D-xylose metabolic process1.51E-03
41GO:0010337: regulation of salicylic acid metabolic process1.51E-03
42GO:0006596: polyamine biosynthetic process1.51E-03
43GO:0010150: leaf senescence1.76E-03
44GO:0071470: cellular response to osmotic stress1.81E-03
45GO:0009942: longitudinal axis specification1.81E-03
46GO:0009651: response to salt stress1.83E-03
47GO:0009414: response to water deprivation2.13E-03
48GO:0006979: response to oxidative stress2.25E-03
49GO:0009407: toxin catabolic process2.35E-03
50GO:0009737: response to abscisic acid2.41E-03
51GO:0010928: regulation of auxin mediated signaling pathway2.46E-03
52GO:0009787: regulation of abscisic acid-activated signaling pathway2.46E-03
53GO:0009819: drought recovery2.46E-03
54GO:0043068: positive regulation of programmed cell death2.46E-03
55GO:0009611: response to wounding3.12E-03
56GO:0010112: regulation of systemic acquired resistance3.17E-03
57GO:0009056: catabolic process3.17E-03
58GO:0006897: endocytosis3.20E-03
59GO:0048268: clathrin coat assembly3.55E-03
60GO:0008202: steroid metabolic process3.55E-03
61GO:1900426: positive regulation of defense response to bacterium3.55E-03
62GO:0009684: indoleacetic acid biosynthetic process4.36E-03
63GO:0009682: induced systemic resistance4.36E-03
64GO:0019684: photosynthesis, light reaction4.36E-03
65GO:0072593: reactive oxygen species metabolic process4.36E-03
66GO:2000028: regulation of photoperiodism, flowering5.22E-03
67GO:0034605: cellular response to heat5.68E-03
68GO:0080188: RNA-directed DNA methylation6.14E-03
69GO:0010167: response to nitrate6.14E-03
70GO:0046688: response to copper ion6.14E-03
71GO:0009751: response to salicylic acid6.46E-03
72GO:0000162: tryptophan biosynthetic process6.62E-03
73GO:0009624: response to nematode6.62E-03
74GO:0006874: cellular calcium ion homeostasis7.62E-03
75GO:0006825: copper ion transport7.62E-03
76GO:0051321: meiotic cell cycle8.14E-03
77GO:0010017: red or far-red light signaling pathway8.67E-03
78GO:0009625: response to insect9.21E-03
79GO:0006470: protein dephosphorylation1.31E-02
80GO:0007166: cell surface receptor signaling pathway1.31E-02
81GO:0071554: cell wall organization or biogenesis1.34E-02
82GO:0019761: glucosinolate biosynthetic process1.40E-02
83GO:0045893: positive regulation of transcription, DNA-templated1.63E-02
84GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.80E-02
85GO:0006970: response to osmotic stress1.92E-02
86GO:0006950: response to stress1.95E-02
87GO:0009832: plant-type cell wall biogenesis2.17E-02
88GO:0080167: response to karrikin2.21E-02
89GO:0010200: response to chitin2.28E-02
90GO:0009631: cold acclimation2.32E-02
91GO:0010119: regulation of stomatal movement2.32E-02
92GO:0007275: multicellular organism development2.43E-02
93GO:0009867: jasmonic acid mediated signaling pathway2.48E-02
94GO:0015979: photosynthesis2.52E-02
95GO:0006468: protein phosphorylation2.91E-02
96GO:0051707: response to other organism2.97E-02
97GO:0009744: response to sucrose2.97E-02
98GO:0009408: response to heat3.26E-02
99GO:0006855: drug transmembrane transport3.31E-02
100GO:0042538: hyperosmotic salinity response3.49E-02
101GO:0009664: plant-type cell wall organization3.49E-02
102GO:0010224: response to UV-B3.76E-02
103GO:0009873: ethylene-activated signaling pathway4.19E-02
104GO:0006952: defense response4.21E-02
105GO:0048316: seed development4.23E-02
106GO:0006357: regulation of transcription from RNA polymerase II promoter4.30E-02
107GO:0009626: plant-type hypersensitive response4.32E-02
RankGO TermAdjusted P value
1GO:0080131: hydroxyjasmonate sulfotransferase activity0.00E+00
2GO:0005212: structural constituent of eye lens0.00E+00
3GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
4GO:0003978: UDP-glucose 4-epimerase activity4.35E-07
5GO:0050373: UDP-arabinose 4-epimerase activity1.51E-05
6GO:0043295: glutathione binding7.02E-05
7GO:2001227: quercitrin binding1.35E-04
8GO:0019707: protein-cysteine S-acyltransferase activity1.35E-04
9GO:2001147: camalexin binding1.35E-04
10GO:0008792: arginine decarboxylase activity1.35E-04
11GO:0015152: glucose-6-phosphate transmembrane transporter activity3.11E-04
12GO:0008460: dTDP-glucose 4,6-dehydratase activity3.11E-04
13GO:0047364: desulfoglucosinolate sulfotransferase activity3.11E-04
14GO:0030553: cGMP binding3.91E-04
15GO:0008146: sulfotransferase activity3.91E-04
16GO:0030552: cAMP binding3.91E-04
17GO:0004324: ferredoxin-NADP+ reductase activity5.13E-04
18GO:0016531: copper chaperone activity5.13E-04
19GO:0032403: protein complex binding5.13E-04
20GO:0071917: triose-phosphate transmembrane transporter activity5.13E-04
21GO:0005216: ion channel activity5.33E-04
22GO:0030551: cyclic nucleotide binding8.75E-04
23GO:0005249: voltage-gated potassium channel activity8.75E-04
24GO:0004737: pyruvate decarboxylase activity9.73E-04
25GO:0015120: phosphoglycerate transmembrane transporter activity9.73E-04
26GO:0004834: tryptophan synthase activity9.73E-04
27GO:0019901: protein kinase binding1.08E-03
28GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.47E-03
29GO:0048040: UDP-glucuronate decarboxylase activity1.51E-03
30GO:0030976: thiamine pyrophosphate binding1.51E-03
31GO:0070403: NAD+ binding1.81E-03
32GO:0003950: NAD+ ADP-ribosyltransferase activity1.81E-03
33GO:0008375: acetylglucosaminyltransferase activity1.83E-03
34GO:0016831: carboxy-lyase activity2.12E-03
35GO:0004033: aldo-keto reductase (NADP) activity2.46E-03
36GO:0008135: translation factor activity, RNA binding2.81E-03
37GO:0008142: oxysterol binding2.81E-03
38GO:0004364: glutathione transferase activity3.33E-03
39GO:0005545: 1-phosphatidylinositol binding3.95E-03
40GO:0008559: xenobiotic-transporting ATPase activity4.36E-03
41GO:0005315: inorganic phosphate transmembrane transporter activity5.22E-03
42GO:0005516: calmodulin binding5.61E-03
43GO:0005217: intracellular ligand-gated ion channel activity6.14E-03
44GO:0004970: ionotropic glutamate receptor activity6.14E-03
45GO:0001046: core promoter sequence-specific DNA binding7.11E-03
46GO:0019706: protein-cysteine S-palmitoyltransferase activity8.14E-03
47GO:0003824: catalytic activity1.01E-02
48GO:0015297: antiporter activity1.09E-02
49GO:0030276: clathrin binding1.15E-02
50GO:0005199: structural constituent of cell wall1.15E-02
51GO:0043565: sequence-specific DNA binding1.33E-02
52GO:0004197: cysteine-type endopeptidase activity1.40E-02
53GO:0016413: O-acetyltransferase activity1.66E-02
54GO:0016757: transferase activity, transferring glycosyl groups1.86E-02
55GO:0030247: polysaccharide binding1.95E-02
56GO:0004721: phosphoprotein phosphatase activity1.95E-02
57GO:0043531: ADP binding1.95E-02
58GO:0015238: drug transmembrane transporter activity2.17E-02
59GO:0050897: cobalt ion binding2.32E-02
60GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.64E-02
61GO:0004722: protein serine/threonine phosphatase activity2.90E-02
62GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.94E-02
63GO:0035091: phosphatidylinositol binding3.14E-02
RankGO TermAdjusted P value
1GO:0000813: ESCRT I complex2.48E-05
2GO:0032580: Golgi cisterna membrane1.08E-04
3GO:0000138: Golgi trans cisterna1.35E-04
4GO:0005901: caveola3.11E-04
5GO:0016021: integral component of membrane3.42E-04
6GO:0008287: protein serine/threonine phosphatase complex5.13E-04
7GO:0009530: primary cell wall5.13E-04
8GO:0005794: Golgi apparatus7.85E-04
9GO:0016363: nuclear matrix1.81E-03
10GO:0015030: Cajal body3.55E-03
11GO:0031012: extracellular matrix5.22E-03
12GO:0005578: proteinaceous extracellular matrix5.22E-03
13GO:0005802: trans-Golgi network6.17E-03
14GO:0005769: early endosome6.62E-03
15GO:0005758: mitochondrial intermembrane space7.11E-03
16GO:0005886: plasma membrane7.91E-03
17GO:0005905: clathrin-coated pit8.14E-03
18GO:0030136: clathrin-coated vesicle1.03E-02
19GO:0000325: plant-type vacuole2.32E-02
20GO:0000786: nucleosome2.40E-02
21GO:0005768: endosome2.90E-02
22GO:0005681: spliceosomal complex4.13E-02
23GO:0005887: integral component of plasma membrane4.41E-02
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Gene type



Gene DE type