GO Enrichment Analysis of Co-expressed Genes with
AT4G23885
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 2 | GO:1900409: positive regulation of cellular response to oxidative stress | 0.00E+00 |
| 3 | GO:0072722: response to amitrole | 0.00E+00 |
| 4 | GO:0071985: multivesicular body sorting pathway | 0.00E+00 |
| 5 | GO:0006216: cytidine catabolic process | 0.00E+00 |
| 6 | GO:2000117: negative regulation of cysteine-type endopeptidase activity | 0.00E+00 |
| 7 | GO:0006102: isocitrate metabolic process | 2.14E-06 |
| 8 | GO:0009407: toxin catabolic process | 2.76E-05 |
| 9 | GO:0006564: L-serine biosynthetic process | 3.89E-05 |
| 10 | GO:0046283: anthocyanin-containing compound metabolic process | 3.89E-05 |
| 11 | GO:0006099: tricarboxylic acid cycle | 3.96E-05 |
| 12 | GO:1900384: regulation of flavonol biosynthetic process | 1.77E-04 |
| 13 | GO:0010421: hydrogen peroxide-mediated programmed cell death | 1.77E-04 |
| 14 | GO:0042964: thioredoxin reduction | 1.77E-04 |
| 15 | GO:0046686: response to cadmium ion | 2.07E-04 |
| 16 | GO:0016192: vesicle-mediated transport | 2.43E-04 |
| 17 | GO:0006886: intracellular protein transport | 3.30E-04 |
| 18 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 3.93E-04 |
| 19 | GO:0051252: regulation of RNA metabolic process | 4.01E-04 |
| 20 | GO:0015709: thiosulfate transport | 4.01E-04 |
| 21 | GO:0071422: succinate transmembrane transport | 4.01E-04 |
| 22 | GO:0009805: coumarin biosynthetic process | 4.01E-04 |
| 23 | GO:0015865: purine nucleotide transport | 4.01E-04 |
| 24 | GO:1902000: homogentisate catabolic process | 4.01E-04 |
| 25 | GO:0006807: nitrogen compound metabolic process | 4.47E-04 |
| 26 | GO:0000162: tryptophan biosynthetic process | 6.28E-04 |
| 27 | GO:0044375: regulation of peroxisome size | 6.55E-04 |
| 28 | GO:0072661: protein targeting to plasma membrane | 6.55E-04 |
| 29 | GO:0006517: protein deglycosylation | 6.55E-04 |
| 30 | GO:0010272: response to silver ion | 6.55E-04 |
| 31 | GO:0009072: aromatic amino acid family metabolic process | 6.55E-04 |
| 32 | GO:0006591: ornithine metabolic process | 6.55E-04 |
| 33 | GO:0055074: calcium ion homeostasis | 6.55E-04 |
| 34 | GO:0009636: response to toxic substance | 7.32E-04 |
| 35 | GO:0006874: cellular calcium ion homeostasis | 7.64E-04 |
| 36 | GO:0016998: cell wall macromolecule catabolic process | 8.37E-04 |
| 37 | GO:0015729: oxaloacetate transport | 9.34E-04 |
| 38 | GO:0046902: regulation of mitochondrial membrane permeability | 9.34E-04 |
| 39 | GO:0010188: response to microbial phytotoxin | 1.24E-03 |
| 40 | GO:0006878: cellular copper ion homeostasis | 1.24E-03 |
| 41 | GO:0009851: auxin biosynthetic process | 1.55E-03 |
| 42 | GO:0006465: signal peptide processing | 1.57E-03 |
| 43 | GO:0071423: malate transmembrane transport | 1.57E-03 |
| 44 | GO:0045454: cell redox homeostasis | 1.63E-03 |
| 45 | GO:1901657: glycosyl compound metabolic process | 1.88E-03 |
| 46 | GO:0009972: cytidine deamination | 1.94E-03 |
| 47 | GO:0006561: proline biosynthetic process | 1.94E-03 |
| 48 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.94E-03 |
| 49 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.94E-03 |
| 50 | GO:0009228: thiamine biosynthetic process | 1.94E-03 |
| 51 | GO:0035435: phosphate ion transmembrane transport | 1.94E-03 |
| 52 | GO:0009099: valine biosynthetic process | 2.32E-03 |
| 53 | GO:0009554: megasporogenesis | 2.32E-03 |
| 54 | GO:0009082: branched-chain amino acid biosynthetic process | 2.32E-03 |
| 55 | GO:1900056: negative regulation of leaf senescence | 2.74E-03 |
| 56 | GO:0071669: plant-type cell wall organization or biogenesis | 2.74E-03 |
| 57 | GO:0008272: sulfate transport | 2.74E-03 |
| 58 | GO:0050829: defense response to Gram-negative bacterium | 2.74E-03 |
| 59 | GO:0010150: leaf senescence | 2.84E-03 |
| 60 | GO:0016559: peroxisome fission | 3.17E-03 |
| 61 | GO:0006491: N-glycan processing | 3.17E-03 |
| 62 | GO:0010204: defense response signaling pathway, resistance gene-independent | 3.63E-03 |
| 63 | GO:0009699: phenylpropanoid biosynthetic process | 3.63E-03 |
| 64 | GO:0022900: electron transport chain | 3.63E-03 |
| 65 | GO:0007186: G-protein coupled receptor signaling pathway | 3.63E-03 |
| 66 | GO:0010497: plasmodesmata-mediated intercellular transport | 3.63E-03 |
| 67 | GO:0019430: removal of superoxide radicals | 3.63E-03 |
| 68 | GO:0010120: camalexin biosynthetic process | 3.63E-03 |
| 69 | GO:0009097: isoleucine biosynthetic process | 3.63E-03 |
| 70 | GO:0042742: defense response to bacterium | 4.32E-03 |
| 71 | GO:0006839: mitochondrial transport | 4.45E-03 |
| 72 | GO:0009098: leucine biosynthetic process | 4.60E-03 |
| 73 | GO:2000280: regulation of root development | 4.60E-03 |
| 74 | GO:0009688: abscisic acid biosynthetic process | 5.11E-03 |
| 75 | GO:0043069: negative regulation of programmed cell death | 5.11E-03 |
| 76 | GO:0006032: chitin catabolic process | 5.11E-03 |
| 77 | GO:0000272: polysaccharide catabolic process | 5.65E-03 |
| 78 | GO:0052544: defense response by callose deposition in cell wall | 5.65E-03 |
| 79 | GO:0016925: protein sumoylation | 6.20E-03 |
| 80 | GO:0006790: sulfur compound metabolic process | 6.20E-03 |
| 81 | GO:0015031: protein transport | 6.57E-03 |
| 82 | GO:0009718: anthocyanin-containing compound biosynthetic process | 6.78E-03 |
| 83 | GO:0010102: lateral root morphogenesis | 6.78E-03 |
| 84 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 6.78E-03 |
| 85 | GO:0006417: regulation of translation | 7.51E-03 |
| 86 | GO:0090351: seedling development | 7.98E-03 |
| 87 | GO:0046854: phosphatidylinositol phosphorylation | 7.98E-03 |
| 88 | GO:0007033: vacuole organization | 7.98E-03 |
| 89 | GO:0007031: peroxisome organization | 7.98E-03 |
| 90 | GO:0007030: Golgi organization | 7.98E-03 |
| 91 | GO:0010167: response to nitrate | 7.98E-03 |
| 92 | GO:0009626: plant-type hypersensitive response | 8.55E-03 |
| 93 | GO:0005992: trehalose biosynthetic process | 9.26E-03 |
| 94 | GO:0019748: secondary metabolic process | 1.13E-02 |
| 95 | GO:0009306: protein secretion | 1.27E-02 |
| 96 | GO:0009058: biosynthetic process | 1.28E-02 |
| 97 | GO:0055114: oxidation-reduction process | 1.32E-02 |
| 98 | GO:0042147: retrograde transport, endosome to Golgi | 1.35E-02 |
| 99 | GO:0006662: glycerol ether metabolic process | 1.50E-02 |
| 100 | GO:0045489: pectin biosynthetic process | 1.50E-02 |
| 101 | GO:0048544: recognition of pollen | 1.58E-02 |
| 102 | GO:0010183: pollen tube guidance | 1.66E-02 |
| 103 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.75E-02 |
| 104 | GO:0009630: gravitropism | 1.83E-02 |
| 105 | GO:0009615: response to virus | 2.27E-02 |
| 106 | GO:0009409: response to cold | 2.45E-02 |
| 107 | GO:0009627: systemic acquired resistance | 2.45E-02 |
| 108 | GO:0006906: vesicle fusion | 2.45E-02 |
| 109 | GO:0006974: cellular response to DNA damage stimulus | 2.45E-02 |
| 110 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.55E-02 |
| 111 | GO:0016049: cell growth | 2.64E-02 |
| 112 | GO:0009817: defense response to fungus, incompatible interaction | 2.74E-02 |
| 113 | GO:0006499: N-terminal protein myristoylation | 2.94E-02 |
| 114 | GO:0010043: response to zinc ion | 3.04E-02 |
| 115 | GO:0034599: cellular response to oxidative stress | 3.35E-02 |
| 116 | GO:0009651: response to salt stress | 3.45E-02 |
| 117 | GO:0006887: exocytosis | 3.67E-02 |
| 118 | GO:0042542: response to hydrogen peroxide | 3.78E-02 |
| 119 | GO:0051707: response to other organism | 3.88E-02 |
| 120 | GO:0000209: protein polyubiquitination | 4.00E-02 |
| 121 | GO:0031347: regulation of defense response | 4.45E-02 |
| 122 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 4.45E-02 |
| 123 | GO:0009664: plant-type cell wall organization | 4.56E-02 |
| 124 | GO:0009846: pollen germination | 4.56E-02 |
| 125 | GO:0042538: hyperosmotic salinity response | 4.56E-02 |
| 126 | GO:0009751: response to salicylic acid | 4.66E-02 |
| 127 | GO:0006629: lipid metabolic process | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 2 | GO:0016034: maleylacetoacetate isomerase activity | 0.00E+00 |
| 3 | GO:0051766: inositol trisphosphate kinase activity | 0.00E+00 |
| 4 | GO:0047844: deoxycytidine deaminase activity | 0.00E+00 |
| 5 | GO:0051765: inositol tetrakisphosphate kinase activity | 0.00E+00 |
| 6 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 3.69E-08 |
| 7 | GO:0019172: glyoxalase III activity | 1.52E-06 |
| 8 | GO:0004364: glutathione transferase activity | 5.49E-05 |
| 9 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 5.77E-05 |
| 10 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 5.77E-05 |
| 11 | GO:0008320: protein transmembrane transporter activity | 1.07E-04 |
| 12 | GO:2001147: camalexin binding | 1.77E-04 |
| 13 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 1.77E-04 |
| 14 | GO:0004649: poly(ADP-ribose) glycohydrolase activity | 1.77E-04 |
| 15 | GO:0016229: steroid dehydrogenase activity | 1.77E-04 |
| 16 | GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 1.77E-04 |
| 17 | GO:2001227: quercitrin binding | 1.77E-04 |
| 18 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.77E-04 |
| 19 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 1.77E-04 |
| 20 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 1.77E-04 |
| 21 | GO:0070401: NADP+ binding | 1.77E-04 |
| 22 | GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity | 1.77E-04 |
| 23 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 1.77E-04 |
| 24 | GO:0032266: phosphatidylinositol-3-phosphate binding | 1.77E-04 |
| 25 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 1.77E-04 |
| 26 | GO:0048037: cofactor binding | 1.77E-04 |
| 27 | GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 4.01E-04 |
| 28 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 4.01E-04 |
| 29 | GO:0052739: phosphatidylserine 1-acylhydrolase activity | 4.01E-04 |
| 30 | GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity | 4.01E-04 |
| 31 | GO:0004617: phosphoglycerate dehydrogenase activity | 4.01E-04 |
| 32 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 4.01E-04 |
| 33 | GO:0015117: thiosulfate transmembrane transporter activity | 4.01E-04 |
| 34 | GO:0008428: ribonuclease inhibitor activity | 4.01E-04 |
| 35 | GO:1901677: phosphate transmembrane transporter activity | 4.01E-04 |
| 36 | GO:0005217: intracellular ligand-gated ion channel activity | 5.64E-04 |
| 37 | GO:0004970: ionotropic glutamate receptor activity | 5.64E-04 |
| 38 | GO:0005310: dicarboxylic acid transmembrane transporter activity | 6.55E-04 |
| 39 | GO:0015141: succinate transmembrane transporter activity | 6.55E-04 |
| 40 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 6.55E-04 |
| 41 | GO:0051287: NAD binding | 8.04E-04 |
| 42 | GO:0052656: L-isoleucine transaminase activity | 9.34E-04 |
| 43 | GO:0052654: L-leucine transaminase activity | 9.34E-04 |
| 44 | GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity | 9.34E-04 |
| 45 | GO:0017077: oxidative phosphorylation uncoupler activity | 9.34E-04 |
| 46 | GO:0052655: L-valine transaminase activity | 9.34E-04 |
| 47 | GO:0015131: oxaloacetate transmembrane transporter activity | 9.34E-04 |
| 48 | GO:0004834: tryptophan synthase activity | 1.24E-03 |
| 49 | GO:0004084: branched-chain-amino-acid transaminase activity | 1.24E-03 |
| 50 | GO:0004930: G-protein coupled receptor activity | 1.24E-03 |
| 51 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 1.24E-03 |
| 52 | GO:0004031: aldehyde oxidase activity | 1.24E-03 |
| 53 | GO:0050302: indole-3-acetaldehyde oxidase activity | 1.24E-03 |
| 54 | GO:0004791: thioredoxin-disulfide reductase activity | 1.44E-03 |
| 55 | GO:0015035: protein disulfide oxidoreductase activity | 1.47E-03 |
| 56 | GO:0031386: protein tag | 1.57E-03 |
| 57 | GO:0005471: ATP:ADP antiporter activity | 1.57E-03 |
| 58 | GO:0008374: O-acyltransferase activity | 1.57E-03 |
| 59 | GO:0008948: oxaloacetate decarboxylase activity | 1.57E-03 |
| 60 | GO:0035252: UDP-xylosyltransferase activity | 1.94E-03 |
| 61 | GO:0051920: peroxiredoxin activity | 2.32E-03 |
| 62 | GO:0004126: cytidine deaminase activity | 2.32E-03 |
| 63 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.32E-03 |
| 64 | GO:0004602: glutathione peroxidase activity | 2.32E-03 |
| 65 | GO:0043295: glutathione binding | 2.74E-03 |
| 66 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 2.74E-03 |
| 67 | GO:0015140: malate transmembrane transporter activity | 2.74E-03 |
| 68 | GO:0102483: scopolin beta-glucosidase activity | 2.80E-03 |
| 69 | GO:0016209: antioxidant activity | 3.17E-03 |
| 70 | GO:0004033: aldo-keto reductase (NADP) activity | 3.17E-03 |
| 71 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 3.63E-03 |
| 72 | GO:0008422: beta-glucosidase activity | 4.27E-03 |
| 73 | GO:0030955: potassium ion binding | 4.60E-03 |
| 74 | GO:0004743: pyruvate kinase activity | 4.60E-03 |
| 75 | GO:0000287: magnesium ion binding | 4.82E-03 |
| 76 | GO:0004601: peroxidase activity | 4.93E-03 |
| 77 | GO:0004568: chitinase activity | 5.11E-03 |
| 78 | GO:0008794: arsenate reductase (glutaredoxin) activity | 5.65E-03 |
| 79 | GO:0015116: sulfate transmembrane transporter activity | 6.20E-03 |
| 80 | GO:0031624: ubiquitin conjugating enzyme binding | 7.37E-03 |
| 81 | GO:0008061: chitin binding | 7.98E-03 |
| 82 | GO:0005507: copper ion binding | 9.18E-03 |
| 83 | GO:0043130: ubiquitin binding | 9.26E-03 |
| 84 | GO:0004499: N,N-dimethylaniline monooxygenase activity | 1.27E-02 |
| 85 | GO:0047134: protein-disulfide reductase activity | 1.35E-02 |
| 86 | GO:0030170: pyridoxal phosphate binding | 1.35E-02 |
| 87 | GO:0004527: exonuclease activity | 1.50E-02 |
| 88 | GO:0005199: structural constituent of cell wall | 1.50E-02 |
| 89 | GO:0008080: N-acetyltransferase activity | 1.50E-02 |
| 90 | GO:0004518: nuclease activity | 1.83E-02 |
| 91 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.91E-02 |
| 92 | GO:0016597: amino acid binding | 2.18E-02 |
| 93 | GO:0051213: dioxygenase activity | 2.27E-02 |
| 94 | GO:0004683: calmodulin-dependent protein kinase activity | 2.55E-02 |
| 95 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.55E-02 |
| 96 | GO:0016740: transferase activity | 2.82E-02 |
| 97 | GO:0043531: ADP binding | 2.85E-02 |
| 98 | GO:0050660: flavin adenine dinucleotide binding | 3.00E-02 |
| 99 | GO:0030145: manganese ion binding | 3.04E-02 |
| 100 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.04E-02 |
| 101 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.24E-02 |
| 102 | GO:0003993: acid phosphatase activity | 3.35E-02 |
| 103 | GO:0000149: SNARE binding | 3.45E-02 |
| 104 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.45E-02 |
| 105 | GO:0050661: NADP binding | 3.56E-02 |
| 106 | GO:0042393: histone binding | 3.56E-02 |
| 107 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 3.85E-02 |
| 108 | GO:0005484: SNAP receptor activity | 3.88E-02 |
| 109 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.11E-02 |
| 110 | GO:0005198: structural molecule activity | 4.22E-02 |
| 111 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 4.28E-02 |
| 112 | GO:0003924: GTPase activity | 4.73E-02 |
| 113 | GO:0016298: lipase activity | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 1.07E-04 |
| 2 | GO:0031901: early endosome membrane | 2.09E-04 |
| 3 | GO:0031090: organelle membrane | 2.09E-04 |
| 4 | GO:0000814: ESCRT II complex | 4.01E-04 |
| 5 | GO:0009530: primary cell wall | 6.55E-04 |
| 6 | GO:0030130: clathrin coat of trans-Golgi network vesicle | 6.55E-04 |
| 7 | GO:0030132: clathrin coat of coated pit | 6.55E-04 |
| 8 | GO:0005829: cytosol | 1.52E-03 |
| 9 | GO:0032580: Golgi cisterna membrane | 2.00E-03 |
| 10 | GO:0030173: integral component of Golgi membrane | 2.32E-03 |
| 11 | GO:0005779: integral component of peroxisomal membrane | 3.63E-03 |
| 12 | GO:0005750: mitochondrial respiratory chain complex III | 7.37E-03 |
| 13 | GO:0005769: early endosome | 8.61E-03 |
| 14 | GO:0005794: Golgi apparatus | 1.40E-02 |
| 15 | GO:0005770: late endosome | 1.50E-02 |
| 16 | GO:0009504: cell plate | 1.66E-02 |
| 17 | GO:0016592: mediator complex | 1.83E-02 |
| 18 | GO:0071944: cell periphery | 1.91E-02 |
| 19 | GO:0005783: endoplasmic reticulum | 2.01E-02 |
| 20 | GO:0005778: peroxisomal membrane | 2.09E-02 |
| 21 | GO:0005788: endoplasmic reticulum lumen | 2.36E-02 |
| 22 | GO:0000139: Golgi membrane | 2.45E-02 |
| 23 | GO:0005886: plasma membrane | 2.72E-02 |
| 24 | GO:0000151: ubiquitin ligase complex | 2.74E-02 |
| 25 | GO:0005789: endoplasmic reticulum membrane | 2.93E-02 |
| 26 | GO:0009506: plasmodesma | 3.33E-02 |
| 27 | GO:0031201: SNARE complex | 3.67E-02 |
| 28 | GO:0090406: pollen tube | 3.88E-02 |
| 29 | GO:0009570: chloroplast stroma | 4.33E-02 |
| 30 | GO:0005743: mitochondrial inner membrane | 4.40E-02 |
| 31 | GO:0005618: cell wall | 4.52E-02 |
| 32 | GO:0005768: endosome | 4.63E-02 |
| 33 | GO:0000502: proteasome complex | 4.80E-02 |
| 34 | GO:0005737: cytoplasm | 4.96E-02 |