co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G23020

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
2	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
3	GO:0080127: fruit septum development	0.00E+00
4	GO:0006907: pinocytosis	0.00E+00
5	GO:0045014: negative regulation of transcription by glucose	0.00E+00
6	GO:0061062: regulation of nematode larval development	7.04E-06
7	GO:0009733: response to auxin	7.83E-06
8	GO:0046620: regulation of organ growth	1.58E-05
9	GO:0009734: auxin-activated signaling pathway	1.19E-04
10	GO:0009686: gibberellin biosynthetic process	3.31E-04
11	GO:0045786: negative regulation of cell cycle	3.97E-04
12	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.97E-04
13	GO:0009926: auxin polar transport	4.41E-04
14	GO:0009739: response to gibberellin	7.07E-04
15	GO:0031648: protein destabilization	8.60E-04
16	GO:0006351: transcription, DNA-templated	9.27E-04
17	GO:0071398: cellular response to fatty acid	1.40E-03
18	GO:0048575: short-day photoperiodism, flowering	1.40E-03
19	GO:0090506: axillary shoot meristem initiation	1.40E-03
20	GO:0048366: leaf development	1.66E-03
21	GO:0006863: purine nucleobase transport	1.93E-03
22	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.93E-03
23	GO:0010321: regulation of vegetative phase change	2.02E-03
24	GO:0010371: regulation of gibberellin biosynthetic process	2.02E-03
25	GO:0040008: regulation of growth	2.56E-03
26	GO:0009956: radial pattern formation	2.71E-03
27	GO:0009755: hormone-mediated signaling pathway	2.71E-03
28	GO:0048629: trichome patterning	2.71E-03
29	GO:0016567: protein ubiquitination	2.98E-03
30	GO:0045487: gibberellin catabolic process	3.47E-03
31	GO:0048497: maintenance of floral organ identity	3.47E-03
32	GO:0009107: lipoate biosynthetic process	3.47E-03
33	GO:0010438: cellular response to sulfur starvation	3.47E-03
34	GO:0010305: leaf vascular tissue pattern formation	4.26E-03
35	GO:0009913: epidermal cell differentiation	4.29E-03
36	GO:1902456: regulation of stomatal opening	4.29E-03
37	GO:0003006: developmental process involved in reproduction	4.29E-03
38	GO:0010942: positive regulation of cell death	4.29E-03
39	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	4.29E-03
40	GO:0010358: leaf shaping	4.29E-03
41	GO:0006355: regulation of transcription, DNA-templated	4.37E-03
42	GO:0031930: mitochondria-nucleus signaling pathway	5.17E-03
43	GO:0006694: steroid biosynthetic process	5.17E-03
44	GO:0071554: cell wall organization or biogenesis	5.26E-03
45	GO:0032502: developmental process	5.62E-03
46	GO:0007050: cell cycle arrest	6.11E-03
47	GO:0009567: double fertilization forming a zygote and endosperm	6.38E-03
48	GO:0009819: drought recovery	7.10E-03
49	GO:0042255: ribosome assembly	7.10E-03
50	GO:0006353: DNA-templated transcription, termination	7.10E-03
51	GO:0006402: mRNA catabolic process	7.10E-03
52	GO:0010439: regulation of glucosinolate biosynthetic process	7.10E-03
53	GO:0009690: cytokinin metabolic process	7.10E-03
54	GO:0009704: de-etiolation	7.10E-03
55	GO:2000070: regulation of response to water deprivation	7.10E-03
56	GO:0007186: G-protein coupled receptor signaling pathway	8.15E-03
57	GO:0048573: photoperiodism, flowering	8.98E-03
58	GO:0048507: meristem development	9.25E-03
59	GO:0051865: protein autoubiquitination	9.25E-03
60	GO:0000373: Group II intron splicing	9.25E-03
61	GO:0048589: developmental growth	9.25E-03
62	GO:0009056: catabolic process	9.25E-03
63	GO:0000902: cell morphogenesis	9.25E-03
64	GO:0009416: response to light stimulus	9.89E-03
65	GO:0045892: negative regulation of transcription, DNA-templated	1.00E-02
66	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.16E-02
67	GO:0009641: shade avoidance	1.16E-02
68	GO:0009867: jasmonic acid mediated signaling pathway	1.27E-02
69	GO:0009682: induced systemic resistance	1.29E-02
70	GO:0008285: negative regulation of cell proliferation	1.29E-02
71	GO:0009750: response to fructose	1.29E-02
72	GO:0010582: floral meristem determinacy	1.42E-02
73	GO:0010152: pollen maturation	1.42E-02
74	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.42E-02
75	GO:0009753: response to jasmonic acid	1.49E-02
76	GO:0006631: fatty acid metabolic process	1.51E-02
77	GO:0010102: lateral root morphogenesis	1.55E-02
78	GO:0010628: positive regulation of gene expression	1.55E-02
79	GO:2000028: regulation of photoperiodism, flowering	1.55E-02
80	GO:0010588: cotyledon vascular tissue pattern formation	1.55E-02
81	GO:0009933: meristem structural organization	1.69E-02
82	GO:0010207: photosystem II assembly	1.69E-02
83	GO:0010223: secondary shoot formation	1.69E-02
84	GO:0009887: animal organ morphogenesis	1.69E-02
85	GO:0010540: basipetal auxin transport	1.69E-02
86	GO:0006302: double-strand break repair	1.69E-02
87	GO:0006468: protein phosphorylation	1.69E-02
88	GO:0048768: root hair cell tip growth	1.69E-02
89	GO:0048467: gynoecium development	1.69E-02
90	GO:0042546: cell wall biogenesis	1.70E-02
91	GO:0090351: seedling development	1.83E-02
92	GO:0009825: multidimensional cell growth	1.83E-02
93	GO:0005992: trehalose biosynthetic process	2.13E-02
94	GO:0051321: meiotic cell cycle	2.44E-02
95	GO:0016114: terpenoid biosynthetic process	2.44E-02
96	GO:0010431: seed maturation	2.44E-02
97	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.61E-02
98	GO:0009723: response to ethylene	2.64E-02
99	GO:0048367: shoot system development	2.70E-02
100	GO:0009693: ethylene biosynthetic process	2.77E-02
101	GO:0071215: cellular response to abscisic acid stimulus	2.77E-02
102	GO:0010082: regulation of root meristem growth	2.77E-02
103	GO:0001944: vasculature development	2.77E-02
104	GO:0009625: response to insect	2.77E-02
105	GO:0006284: base-excision repair	2.94E-02
106	GO:0048443: stamen development	2.94E-02
107	GO:0045492: xylan biosynthetic process	2.94E-02
108	GO:0009740: gibberellic acid mediated signaling pathway	2.96E-02
109	GO:0009624: response to nematode	3.14E-02
110	GO:0000271: polysaccharide biosynthetic process	3.29E-02
111	GO:0080022: primary root development	3.29E-02
112	GO:0010087: phloem or xylem histogenesis	3.29E-02
113	GO:0071555: cell wall organization	3.29E-02
114	GO:0010118: stomatal movement	3.29E-02
115	GO:0009958: positive gravitropism	3.48E-02
116	GO:0010182: sugar mediated signaling pathway	3.48E-02
117	GO:0009741: response to brassinosteroid	3.48E-02
118	GO:0010268: brassinosteroid homeostasis	3.48E-02
119	GO:0045489: pectin biosynthetic process	3.48E-02
120	GO:0007018: microtubule-based movement	3.66E-02
121	GO:0048825: cotyledon development	3.85E-02
122	GO:0009749: response to glucose	3.85E-02
123	GO:0002229: defense response to oomycetes	4.04E-02
124	GO:0016132: brassinosteroid biosynthetic process	4.04E-02
125	GO:0007275: multicellular organism development	4.18E-02
126	GO:0010583: response to cyclopentenone	4.23E-02
127	GO:0019761: glucosinolate biosynthetic process	4.23E-02
128	GO:0009751: response to salicylic acid	4.57E-02
129	GO:0009639: response to red or far red light	4.63E-02
130	GO:0006464: cellular protein modification process	4.63E-02
131	GO:0016125: sterol metabolic process	4.63E-02
132	GO:0019760: glucosinolate metabolic process	4.63E-02
133	GO:0007165: signal transduction	4.64E-02
134	GO:0048364: root development	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0071633: dihydroceramidase activity	0.00E+00
2	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
3	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
4	GO:0010012: steroid 22-alpha hydroxylase activity	3.97E-04
5	GO:0005227: calcium activated cation channel activity	3.97E-04
6	GO:0004871: signal transducer activity	6.86E-04
7	GO:0017118: lipoyltransferase activity	8.60E-04
8	GO:0045543: gibberellin 2-beta-dioxygenase activity	8.60E-04
9	GO:0010296: prenylcysteine methylesterase activity	8.60E-04
10	GO:0016415: octanoyltransferase activity	8.60E-04
11	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	8.60E-04
12	GO:0008805: carbon-monoxide oxygenase activity	8.60E-04
13	GO:0016707: gibberellin 3-beta-dioxygenase activity	1.40E-03
14	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.47E-03
15	GO:0045544: gibberellin 20-oxidase activity	2.02E-03
16	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	2.02E-03
17	GO:0043565: sequence-specific DNA binding	2.26E-03
18	GO:0005345: purine nucleobase transmembrane transporter activity	2.36E-03
19	GO:0010011: auxin binding	2.71E-03
20	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	2.71E-03
21	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.47E-03
22	GO:0008725: DNA-3-methyladenine glycosylase activity	3.47E-03
23	GO:0030332: cyclin binding	4.29E-03
24	GO:0004709: MAP kinase kinase kinase activity	4.29E-03
25	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	4.29E-03
26	GO:0016832: aldehyde-lyase activity	5.17E-03
27	GO:0016413: O-acetyltransferase activity	7.19E-03
28	GO:0004672: protein kinase activity	9.17E-03
29	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	9.25E-03
30	GO:0004805: trehalose-phosphatase activity	1.16E-02
31	GO:0003725: double-stranded RNA binding	1.55E-02
32	GO:0043621: protein self-association	1.77E-02
33	GO:0003712: transcription cofactor activity	1.83E-02
34	GO:0008134: transcription factor binding	2.13E-02
35	GO:0031418: L-ascorbic acid binding	2.13E-02
36	GO:0033612: receptor serine/threonine kinase binding	2.44E-02
37	GO:0003964: RNA-directed DNA polymerase activity	2.44E-02
38	GO:0008408: 3'-5' exonuclease activity	2.44E-02
39	GO:0010333: terpene synthase activity	2.44E-02
40	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.61E-02
41	GO:0003727: single-stranded RNA binding	2.94E-02
42	GO:0016874: ligase activity	2.96E-02
43	GO:0003779: actin binding	3.05E-02
44	GO:0005199: structural constituent of cell wall	3.48E-02
45	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	3.48E-02
46	GO:0016853: isomerase activity	3.66E-02
47	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.04E-02
48	GO:0016762: xyloglucan:xyloglucosyl transferase activity	4.04E-02
49	GO:0004518: nuclease activity	4.23E-02
50	GO:0003677: DNA binding	4.32E-02
51	GO:0000156: phosphorelay response regulator activity	4.43E-02
52	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.47E-02
53	GO:0016759: cellulose synthase activity	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0000408: EKC/KEOPS complex	0.00E+00
2	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
3	GO:0000791: euchromatin	3.97E-04
4	GO:0030870: Mre11 complex	8.60E-04
5	GO:0009531: secondary cell wall	2.02E-03
6	GO:0000795: synaptonemal complex	3.47E-03
7	GO:0005886: plasma membrane	1.23E-02
8	GO:0030095: chloroplast photosystem II	1.69E-02
9	GO:0005875: microtubule associated complex	1.98E-02
10	GO:0005634: nucleus	2.06E-02
11	GO:0009654: photosystem II oxygen evolving complex	2.29E-02
12	GO:0009532: plastid stroma	2.44E-02
13	GO:0005871: kinesin complex	3.12E-02
14	GO:0009504: cell plate	3.85E-02
15	GO:0019898: extrinsic component of membrane	3.85E-02
16	GO:0016592: mediator complex	4.23E-02
17	GO:0000785: chromatin	4.23E-02