Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G22756

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046460: neutral lipid biosynthetic process0.00E+00
2GO:0090355: positive regulation of auxin metabolic process0.00E+00
3GO:0031116: positive regulation of microtubule polymerization0.00E+00
4GO:0043972: histone H3-K23 acetylation0.00E+00
5GO:0015739: sialic acid transport0.00E+00
6GO:0090358: positive regulation of tryptophan metabolic process0.00E+00
7GO:0044154: histone H3-K14 acetylation0.00E+00
8GO:1901698: response to nitrogen compound0.00E+00
9GO:0048657: anther wall tapetum cell differentiation1.42E-04
10GO:0051171: regulation of nitrogen compound metabolic process1.42E-04
11GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process1.42E-04
12GO:1902265: abscisic acid homeostasis1.42E-04
13GO:0043971: histone H3-K18 acetylation1.42E-04
14GO:0010275: NAD(P)H dehydrogenase complex assembly3.25E-04
15GO:0001578: microtubule bundle formation5.33E-04
16GO:0045493: xylan catabolic process5.33E-04
17GO:0031022: nuclear migration along microfilament5.33E-04
18GO:0006013: mannose metabolic process5.33E-04
19GO:0071705: nitrogen compound transport5.33E-04
20GO:0009800: cinnamic acid biosynthetic process7.63E-04
21GO:0010306: rhamnogalacturonan II biosynthetic process7.63E-04
22GO:0010255: glucose mediated signaling pathway7.63E-04
23GO:0006168: adenine salvage7.63E-04
24GO:0006166: purine ribonucleoside salvage7.63E-04
25GO:0048868: pollen tube development9.96E-04
26GO:0015846: polyamine transport1.01E-03
27GO:0009902: chloroplast relocation1.01E-03
28GO:0051322: anaphase1.01E-03
29GO:0071249: cellular response to nitrate1.01E-03
30GO:0007020: microtubule nucleation1.01E-03
31GO:0046785: microtubule polymerization1.28E-03
32GO:0031365: N-terminal protein amino acid modification1.28E-03
33GO:0044209: AMP salvage1.28E-03
34GO:0006665: sphingolipid metabolic process1.28E-03
35GO:0016125: sterol metabolic process1.47E-03
36GO:0010315: auxin efflux1.57E-03
37GO:0006559: L-phenylalanine catabolic process1.57E-03
38GO:0009903: chloroplast avoidance movement1.88E-03
39GO:0034389: lipid particle organization1.88E-03
40GO:0009451: RNA modification1.96E-03
41GO:0009610: response to symbiotic fungus2.21E-03
42GO:0048528: post-embryonic root development2.21E-03
43GO:0009834: plant-type secondary cell wall biogenesis2.50E-03
44GO:0007155: cell adhesion2.56E-03
45GO:0009787: regulation of abscisic acid-activated signaling pathway2.56E-03
46GO:0006353: DNA-templated transcription, termination2.56E-03
47GO:0007389: pattern specification process2.93E-03
48GO:0044030: regulation of DNA methylation2.93E-03
49GO:0006002: fructose 6-phosphate metabolic process2.93E-03
50GO:0022900: electron transport chain2.93E-03
51GO:0009827: plant-type cell wall modification2.93E-03
52GO:0015780: nucleotide-sugar transport3.31E-03
53GO:0019432: triglyceride biosynthetic process3.31E-03
54GO:0048354: mucilage biosynthetic process involved in seed coat development3.71E-03
55GO:0010380: regulation of chlorophyll biosynthetic process3.71E-03
56GO:0010192: mucilage biosynthetic process4.12E-03
57GO:0015706: nitrate transport4.99E-03
58GO:0030048: actin filament-based movement5.45E-03
59GO:0009825: multidimensional cell growth6.41E-03
60GO:0080188: RNA-directed DNA methylation6.41E-03
61GO:0010167: response to nitrate6.41E-03
62GO:0006071: glycerol metabolic process6.91E-03
63GO:0000162: tryptophan biosynthetic process6.91E-03
64GO:0006289: nucleotide-excision repair7.42E-03
65GO:0010187: negative regulation of seed germination7.42E-03
66GO:0010073: meristem maintenance7.95E-03
67GO:0043622: cortical microtubule organization7.95E-03
68GO:0016226: iron-sulfur cluster assembly9.05E-03
69GO:0080092: regulation of pollen tube growth9.05E-03
70GO:0010584: pollen exine formation1.02E-02
71GO:0010268: brassinosteroid homeostasis1.20E-02
72GO:0045489: pectin biosynthetic process1.20E-02
73GO:0007623: circadian rhythm1.22E-02
74GO:0009851: auxin biosynthetic process1.33E-02
75GO:0016132: brassinosteroid biosynthetic process1.39E-02
76GO:0007264: small GTPase mediated signal transduction1.46E-02
77GO:0010252: auxin homeostasis1.60E-02
78GO:0000910: cytokinesis1.74E-02
79GO:0006508: proteolysis1.74E-02
80GO:0009911: positive regulation of flower development1.81E-02
81GO:0009826: unidimensional cell growth1.82E-02
82GO:0010029: regulation of seed germination1.88E-02
83GO:0055085: transmembrane transport1.99E-02
84GO:0010411: xyloglucan metabolic process2.03E-02
85GO:0009860: pollen tube growth2.04E-02
86GO:0030244: cellulose biosynthetic process2.19E-02
87GO:0006811: ion transport2.34E-02
88GO:0007568: aging2.42E-02
89GO:0009910: negative regulation of flower development2.42E-02
90GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.43E-02
91GO:0009637: response to blue light2.59E-02
92GO:0009853: photorespiration2.59E-02
93GO:0008283: cell proliferation3.10E-02
94GO:0009926: auxin polar transport3.10E-02
95GO:0051707: response to other organism3.10E-02
96GO:0006468: protein phosphorylation3.27E-02
97GO:0008643: carbohydrate transport3.28E-02
98GO:0071555: cell wall organization3.57E-02
99GO:0008152: metabolic process3.81E-02
100GO:0051603: proteolysis involved in cellular protein catabolic process3.93E-02
101GO:0010224: response to UV-B3.93E-02
102GO:0006096: glycolytic process4.32E-02
103GO:0006952: defense response4.65E-02
104GO:0009740: gibberellic acid mediated signaling pathway4.72E-02
105GO:0009553: embryo sac development4.82E-02
106GO:0009734: auxin-activated signaling pathway4.85E-02
RankGO TermAdjusted P value
1GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
2GO:0019808: polyamine binding0.00E+00
3GO:0015136: sialic acid transmembrane transporter activity0.00E+00
4GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
5GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity0.00E+00
6GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity0.00E+00
7GO:0080062: cytokinin 9-beta-glucosyltransferase activity1.42E-04
8GO:0047807: cytokinin 7-beta-glucosyltransferase activity1.42E-04
9GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity1.42E-04
10GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity3.25E-04
11GO:0004047: aminomethyltransferase activity3.25E-04
12GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity3.25E-04
13GO:0032549: ribonucleoside binding5.33E-04
14GO:0016805: dipeptidase activity5.33E-04
15GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity5.33E-04
16GO:0045548: phenylalanine ammonia-lyase activity5.33E-04
17GO:0003999: adenine phosphoribosyltransferase activity7.63E-04
18GO:0070628: proteasome binding1.01E-03
19GO:0009044: xylan 1,4-beta-xylosidase activity1.01E-03
20GO:0046556: alpha-L-arabinofuranosidase activity1.01E-03
21GO:0010385: double-stranded methylated DNA binding1.01E-03
22GO:0031593: polyubiquitin binding1.57E-03
23GO:0004144: diacylglycerol O-acyltransferase activity1.88E-03
24GO:0004559: alpha-mannosidase activity1.88E-03
25GO:0019899: enzyme binding2.21E-03
26GO:0005338: nucleotide-sugar transmembrane transporter activity2.21E-03
27GO:0008235: metalloexopeptidase activity2.21E-03
28GO:0003872: 6-phosphofructokinase activity2.21E-03
29GO:0009672: auxin:proton symporter activity3.71E-03
30GO:0015020: glucuronosyltransferase activity4.12E-03
31GO:0005089: Rho guanyl-nucleotide exchange factor activity4.55E-03
32GO:0008327: methyl-CpG binding4.55E-03
33GO:0001054: RNA polymerase I activity4.55E-03
34GO:0004177: aminopeptidase activity4.55E-03
35GO:0010329: auxin efflux transmembrane transporter activity5.45E-03
36GO:0042973: glucan endo-1,3-beta-D-glucosidase activity5.92E-03
37GO:0080043: quercetin 3-O-glucosyltransferase activity6.43E-03
38GO:0080044: quercetin 7-O-glucosyltransferase activity6.43E-03
39GO:0022857: transmembrane transporter activity6.62E-03
40GO:0043130: ubiquitin binding7.42E-03
41GO:0004519: endonuclease activity7.91E-03
42GO:0004176: ATP-dependent peptidase activity8.49E-03
43GO:0004402: histone acetyltransferase activity1.14E-02
44GO:0001085: RNA polymerase II transcription factor binding1.20E-02
45GO:0008017: microtubule binding1.28E-02
46GO:0008194: UDP-glycosyltransferase activity1.36E-02
47GO:0003684: damaged DNA binding1.60E-02
48GO:0008237: metallopeptidase activity1.67E-02
49GO:0004672: protein kinase activity1.72E-02
50GO:0016413: O-acetyltransferase activity1.74E-02
51GO:0004806: triglyceride lipase activity2.03E-02
52GO:0030247: polysaccharide binding2.03E-02
53GO:0043531: ADP binding2.07E-02
54GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.09E-02
55GO:0030246: carbohydrate binding2.14E-02
56GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.42E-02
57GO:0042393: histone binding2.84E-02
58GO:0004185: serine-type carboxypeptidase activity3.10E-02
59GO:0051537: 2 iron, 2 sulfur cluster binding3.28E-02
60GO:0043621: protein self-association3.28E-02
61GO:0003924: GTPase activity3.46E-02
62GO:0004674: protein serine/threonine kinase activity3.83E-02
63GO:0003899: DNA-directed 5'-3' RNA polymerase activity3.83E-02
64GO:0003777: microtubule motor activity4.12E-02
65GO:0005524: ATP binding4.69E-02
RankGO TermAdjusted P value
1GO:0042597: periplasmic space0.00E+00
2GO:0010370: perinucleolar chromocenter1.42E-04
3GO:0009507: chloroplast2.10E-04
4GO:0009897: external side of plasma membrane5.33E-04
5GO:0009505: plant-type cell wall9.58E-04
6GO:0072686: mitotic spindle1.28E-03
7GO:0005945: 6-phosphofructokinase complex1.28E-03
8GO:0005802: trans-Golgi network1.64E-03
9GO:0010005: cortical microtubule, transverse to long axis1.88E-03
10GO:0005768: endosome2.05E-03
11GO:0005811: lipid particle2.93E-03
12GO:0005819: spindle3.12E-03
13GO:0005720: nuclear heterochromatin3.31E-03
14GO:0005736: DNA-directed RNA polymerase I complex3.31E-03
15GO:0055028: cortical microtubule4.12E-03
16GO:0016324: apical plasma membrane4.12E-03
17GO:0009574: preprophase band5.45E-03
18GO:0005938: cell cortex5.45E-03
19GO:0016602: CCAAT-binding factor complex5.45E-03
20GO:0045271: respiratory chain complex I7.95E-03
21GO:0043231: intracellular membrane-bounded organelle8.05E-03
22GO:0046658: anchored component of plasma membrane1.62E-02
23GO:0005667: transcription factor complex1.96E-02
24GO:0009707: chloroplast outer membrane2.19E-02
25GO:0005874: microtubule2.27E-02
26GO:0031225: anchored component of membrane2.58E-02
27GO:0005886: plasma membrane3.12E-02
28GO:0005856: cytoskeleton3.37E-02
29GO:0031966: mitochondrial membrane3.65E-02
30GO:0005747: mitochondrial respiratory chain complex I4.42E-02
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Gene type



Gene DE type