Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G22290

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045014: negative regulation of transcription by glucose0.00E+00
2GO:0070455: positive regulation of heme biosynthetic process0.00E+00
3GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA0.00E+00
4GO:0006468: protein phosphorylation1.49E-05
5GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.17E-05
6GO:0010495: long-distance posttranscriptional gene silencing8.96E-05
7GO:0010070: zygote asymmetric cell division8.96E-05
8GO:0010069: zygote asymmetric cytokinesis in embryo sac2.12E-04
9GO:0080175: phragmoplast microtubule organization2.12E-04
10GO:0070919: production of siRNA involved in chromatin silencing by small RNA3.54E-04
11GO:0016567: protein ubiquitination4.17E-04
12GO:0033014: tetrapyrrole biosynthetic process5.10E-04
13GO:1902290: positive regulation of defense response to oomycetes5.10E-04
14GO:0009956: radial pattern formation6.78E-04
15GO:0051225: spindle assembly8.59E-04
16GO:0009616: virus induced gene silencing8.59E-04
17GO:0009959: negative gravitropism1.05E-03
18GO:0035194: posttranscriptional gene silencing by RNA1.05E-03
19GO:0016458: gene silencing1.05E-03
20GO:0015995: chlorophyll biosynthetic process1.12E-03
21GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity1.25E-03
22GO:0048444: floral organ morphogenesis1.25E-03
23GO:0009416: response to light stimulus1.28E-03
24GO:0006401: RNA catabolic process1.46E-03
25GO:0009610: response to symbiotic fungus1.46E-03
26GO:0051865: protein autoubiquitination2.18E-03
27GO:0006783: heme biosynthetic process2.18E-03
28GO:0048589: developmental growth2.18E-03
29GO:0031347: regulation of defense response2.41E-03
30GO:1900426: positive regulation of defense response to bacterium2.43E-03
31GO:0006782: protoporphyrinogen IX biosynthetic process2.70E-03
32GO:0030422: production of siRNA involved in RNA interference2.70E-03
33GO:0048829: root cap development2.70E-03
34GO:0016441: posttranscriptional gene silencing2.70E-03
35GO:1903507: negative regulation of nucleic acid-templated transcription2.98E-03
36GO:0016485: protein processing2.98E-03
37GO:0010152: pollen maturation3.26E-03
38GO:0009767: photosynthetic electron transport chain3.56E-03
39GO:0009718: anthocyanin-containing compound biosynthetic process3.56E-03
40GO:0009933: meristem structural organization3.86E-03
41GO:0010540: basipetal auxin transport3.86E-03
42GO:0009934: regulation of meristem structural organization3.86E-03
43GO:0051726: regulation of cell cycle4.02E-03
44GO:0009825: multidimensional cell growth4.18E-03
45GO:0080188: RNA-directed DNA methylation4.18E-03
46GO:0007010: cytoskeleton organization4.83E-03
47GO:0080147: root hair cell development4.83E-03
48GO:0051302: regulation of cell division5.17E-03
49GO:0006306: DNA methylation5.52E-03
50GO:0003333: amino acid transmembrane transport5.52E-03
51GO:2000022: regulation of jasmonic acid mediated signaling pathway5.87E-03
52GO:0048443: stamen development6.61E-03
53GO:0006284: base-excision repair6.61E-03
54GO:0042127: regulation of cell proliferation6.61E-03
55GO:0048653: anther development7.37E-03
56GO:0000271: polysaccharide biosynthetic process7.37E-03
57GO:0010051: xylem and phloem pattern formation7.37E-03
58GO:0051301: cell division7.43E-03
59GO:0045489: pectin biosynthetic process7.77E-03
60GO:0010305: leaf vascular tissue pattern formation7.77E-03
61GO:0009958: positive gravitropism7.77E-03
62GO:0009741: response to brassinosteroid7.77E-03
63GO:0009791: post-embryonic development8.58E-03
64GO:0048510: regulation of timing of transition from vegetative to reproductive phase8.99E-03
65GO:0002229: defense response to oomycetes8.99E-03
66GO:0010583: response to cyclopentenone9.42E-03
67GO:0031047: gene silencing by RNA9.42E-03
68GO:0009639: response to red or far red light1.03E-02
69GO:0007049: cell cycle1.13E-02
70GO:0009832: plant-type cell wall biogenesis1.46E-02
71GO:0009834: plant-type secondary cell wall biogenesis1.51E-02
72GO:0006865: amino acid transport1.61E-02
73GO:0016051: carbohydrate biosynthetic process1.66E-02
74GO:0030001: metal ion transport1.82E-02
75GO:0009926: auxin polar transport1.99E-02
76GO:0009965: leaf morphogenesis2.16E-02
77GO:0006260: DNA replication2.28E-02
78GO:0006364: rRNA processing2.46E-02
79GO:0051603: proteolysis involved in cellular protein catabolic process2.52E-02
80GO:0009734: auxin-activated signaling pathway2.62E-02
81GO:0016036: cellular response to phosphate starvation4.44E-02
82GO:0009451: RNA modification4.74E-02
RankGO TermAdjusted P value
1GO:0008859: exoribonuclease II activity0.00E+00
2GO:0098519: nucleotide phosphatase activity, acting on free nucleotides0.00E+00
3GO:0047807: cytokinin 7-beta-glucosyltransferase activity8.96E-05
4GO:0080062: cytokinin 9-beta-glucosyltransferase activity8.96E-05
5GO:0004109: coproporphyrinogen oxidase activity2.12E-04
6GO:0008805: carbon-monoxide oxygenase activity2.12E-04
7GO:0004674: protein serine/threonine kinase activity3.41E-04
8GO:0004672: protein kinase activity3.69E-04
9GO:0004871: signal transducer activity4.21E-04
10GO:0010011: auxin binding6.78E-04
11GO:0010328: auxin influx transmembrane transporter activity6.78E-04
12GO:0043495: protein anchor6.78E-04
13GO:0016301: kinase activity8.41E-04
14GO:0008725: DNA-3-methyladenine glycosylase activity8.59E-04
15GO:0003968: RNA-directed 5'-3' RNA polymerase activity1.05E-03
16GO:0005524: ATP binding1.31E-03
17GO:0003724: RNA helicase activity1.93E-03
18GO:0009982: pseudouridine synthase activity3.56E-03
19GO:0000175: 3'-5'-exoribonuclease activity3.56E-03
20GO:0003714: transcription corepressor activity4.83E-03
21GO:0004540: ribonuclease activity5.52E-03
22GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity5.87E-03
23GO:0008017: microtubule binding6.83E-03
24GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity7.77E-03
25GO:0008080: N-acetyltransferase activity7.77E-03
26GO:0010181: FMN binding8.17E-03
27GO:0019901: protein kinase binding8.58E-03
28GO:0008237: metallopeptidase activity1.07E-02
29GO:0008236: serine-type peptidase activity1.36E-02
30GO:0004222: metalloendopeptidase activity1.51E-02
31GO:0004693: cyclin-dependent protein serine/threonine kinase activity1.51E-02
32GO:0005515: protein binding1.62E-02
33GO:0004712: protein serine/threonine/tyrosine kinase activity1.77E-02
34GO:0004185: serine-type carboxypeptidase activity1.99E-02
35GO:0015293: symporter activity2.16E-02
36GO:0004842: ubiquitin-protein transferase activity2.45E-02
37GO:0003777: microtubule motor activity2.65E-02
38GO:0015171: amino acid transmembrane transporter activity2.65E-02
39GO:0080044: quercetin 7-O-glucosyltransferase activity2.96E-02
40GO:0080043: quercetin 3-O-glucosyltransferase activity2.96E-02
41GO:0051082: unfolded protein binding3.16E-02
42GO:0016758: transferase activity, transferring hexosyl groups3.64E-02
43GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.44E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0005819: spindle1.47E-04
3GO:0070652: HAUS complex3.54E-04
4GO:0000178: exosome (RNase complex)8.59E-04
5GO:0010005: cortical microtubule, transverse to long axis1.25E-03
6GO:0005886: plasma membrane3.57E-03
7GO:0000419: DNA-directed RNA polymerase V complex4.50E-03
8GO:0043234: protein complex4.50E-03
9GO:0009524: phragmoplast4.99E-03
10GO:0071944: cell periphery9.85E-03
11GO:0016021: integral component of membrane1.07E-02
12GO:0000932: P-body1.17E-02
13GO:0005874: microtubule1.21E-02
14GO:0031977: thylakoid lumen1.88E-02
15GO:0090406: pollen tube1.99E-02
16GO:0009505: plant-type cell wall2.17E-02
17GO:0005654: nucleoplasm3.64E-02
18GO:0009543: chloroplast thylakoid lumen3.71E-02
19GO:0005759: mitochondrial matrix4.36E-02
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Gene type



Gene DE type