co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G21960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071000: response to magnetism	0.00E+00
2	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
3	GO:0009583: detection of light stimulus	0.00E+00
4	GO:0048657: anther wall tapetum cell differentiation	4.45E-05
5	GO:0042547: cell wall modification involved in multidimensional cell growth	4.45E-05
6	GO:0072387: flavin adenine dinucleotide metabolic process	4.45E-05
7	GO:0000066: mitochondrial ornithine transport	4.45E-05
8	GO:0080005: photosystem stoichiometry adjustment	1.10E-04
9	GO:0010617: circadian regulation of calcium ion oscillation	1.10E-04
10	GO:0099402: plant organ development	1.10E-04
11	GO:0010343: singlet oxygen-mediated programmed cell death	1.10E-04
12	GO:1901529: positive regulation of anion channel activity	1.10E-04
13	GO:0006435: threonyl-tRNA aminoacylation	1.10E-04
14	GO:0001578: microtubule bundle formation	1.89E-04
15	GO:1902448: positive regulation of shade avoidance	1.89E-04
16	GO:1901672: positive regulation of systemic acquired resistance	1.89E-04
17	GO:0009646: response to absence of light	2.39E-04
18	GO:1901332: negative regulation of lateral root development	2.78E-04
19	GO:1902347: response to strigolactone	3.73E-04
20	GO:0051322: anaphase	3.73E-04
21	GO:0006183: GTP biosynthetic process	3.73E-04
22	GO:0006552: leucine catabolic process	3.73E-04
23	GO:0007020: microtubule nucleation	3.73E-04
24	GO:0046785: microtubule polymerization	4.75E-04
25	GO:0010117: photoprotection	4.75E-04
26	GO:0046283: anthocyanin-containing compound metabolic process	4.75E-04
27	GO:1902183: regulation of shoot apical meristem development	4.75E-04
28	GO:0010158: abaxial cell fate specification	4.75E-04
29	GO:0060918: auxin transport	5.82E-04
30	GO:0042549: photosystem II stabilization	5.82E-04
31	GO:1901371: regulation of leaf morphogenesis	5.82E-04
32	GO:0080167: response to karrikin	6.28E-04
33	GO:0010310: regulation of hydrogen peroxide metabolic process	6.94E-04
34	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	6.94E-04
35	GO:0022904: respiratory electron transport chain	8.11E-04
36	GO:0051510: regulation of unidimensional cell growth	8.11E-04
37	GO:0048528: post-embryonic root development	8.11E-04
38	GO:0009704: de-etiolation	9.32E-04
39	GO:0048564: photosystem I assembly	9.32E-04
40	GO:0022900: electron transport chain	1.06E-03
41	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.19E-03
42	GO:2000024: regulation of leaf development	1.19E-03
43	GO:1900426: positive regulation of defense response to bacterium	1.32E-03
44	GO:0009638: phototropism	1.32E-03
45	GO:0010215: cellulose microfibril organization	1.47E-03
46	GO:0009750: response to fructose	1.61E-03
47	GO:0010075: regulation of meristem growth	1.92E-03
48	GO:0006094: gluconeogenesis	1.92E-03
49	GO:0009767: photosynthetic electron transport chain	1.92E-03
50	GO:0009785: blue light signaling pathway	1.92E-03
51	GO:0010207: photosystem II assembly	2.09E-03
52	GO:0090351: seedling development	2.25E-03
53	GO:0009825: multidimensional cell growth	2.25E-03
54	GO:0009944: polarity specification of adaxial/abaxial axis	2.60E-03
55	GO:2000377: regulation of reactive oxygen species metabolic process	2.60E-03
56	GO:0006825: copper ion transport	2.77E-03
57	GO:0043622: cortical microtubule organization	2.77E-03
58	GO:0009814: defense response, incompatible interaction	3.14E-03
59	GO:0080092: regulation of pollen tube growth	3.14E-03
60	GO:0006730: one-carbon metabolic process	3.14E-03
61	GO:0010584: pollen exine formation	3.53E-03
62	GO:0010118: stomatal movement	3.93E-03
63	GO:0010268: brassinosteroid homeostasis	4.14E-03
64	GO:0010154: fruit development	4.14E-03
65	GO:0042752: regulation of circadian rhythm	4.35E-03
66	GO:0009749: response to glucose	4.56E-03
67	GO:0016132: brassinosteroid biosynthetic process	4.77E-03
68	GO:0071281: cellular response to iron ion	5.22E-03
69	GO:0046777: protein autophosphorylation	5.35E-03
70	GO:0016125: sterol metabolic process	5.45E-03
71	GO:0000910: cytokinesis	5.91E-03
72	GO:0009911: positive regulation of flower development	6.15E-03
73	GO:0010411: xyloglucan metabolic process	6.89E-03
74	GO:0018298: protein-chromophore linkage	7.39E-03
75	GO:0009817: defense response to fungus, incompatible interaction	7.39E-03
76	GO:0010218: response to far red light	7.91E-03
77	GO:0007568: aging	8.18E-03
78	GO:0009637: response to blue light	8.71E-03
79	GO:0009853: photorespiration	8.71E-03
80	GO:0006839: mitochondrial transport	9.55E-03
81	GO:0008283: cell proliferation	1.04E-02
82	GO:0010114: response to red light	1.04E-02
83	GO:0009744: response to sucrose	1.04E-02
84	GO:0009640: photomorphogenesis	1.04E-02
85	GO:0042546: cell wall biogenesis	1.07E-02
86	GO:0009644: response to high light intensity	1.10E-02
87	GO:0010224: response to UV-B	1.32E-02
88	GO:0006417: regulation of translation	1.38E-02
89	GO:0009740: gibberellic acid mediated signaling pathway	1.58E-02
90	GO:0016036: cellular response to phosphate starvation	2.31E-02
91	GO:0007623: circadian rhythm	2.43E-02
92	GO:0045490: pectin catabolic process	2.43E-02
93	GO:0009739: response to gibberellin	2.63E-02
94	GO:0006470: protein dephosphorylation	2.68E-02
95	GO:0010468: regulation of gene expression	2.76E-02
96	GO:0009826: unidimensional cell growth	3.23E-02
97	GO:0009658: chloroplast organization	3.32E-02
98	GO:0009860: pollen tube growth	3.50E-02
99	GO:0009723: response to ethylene	3.68E-02
100	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.96E-02

Rank	GO Term	Adjusted P value
1	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
2	GO:0048039: ubiquinone binding	0.00E+00
3	GO:0003858: 3-hydroxybutyrate dehydrogenase activity	0.00E+00
4	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
5	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
6	GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity	4.45E-05
7	GO:0005290: L-histidine transmembrane transporter activity	4.45E-05
8	GO:0004008: copper-exporting ATPase activity	4.45E-05
9	GO:0004829: threonine-tRNA ligase activity	1.10E-04
10	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.10E-04
11	GO:0003938: IMP dehydrogenase activity	1.10E-04
12	GO:0000064: L-ornithine transmembrane transporter activity	1.10E-04
13	GO:0030267: glyoxylate reductase (NADP) activity	1.89E-04
14	GO:0009882: blue light photoreceptor activity	2.78E-04
15	GO:0015189: L-lysine transmembrane transporter activity	2.78E-04
16	GO:0015181: arginine transmembrane transporter activity	2.78E-04
17	GO:0046872: metal ion binding	4.85E-04
18	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	6.94E-04
19	GO:0051537: 2 iron, 2 sulfur cluster binding	8.93E-04
20	GO:0005375: copper ion transmembrane transporter activity	1.06E-03
21	GO:0071949: FAD binding	1.19E-03
22	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.61E-03
23	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.92E-03
24	GO:0004190: aspartic-type endopeptidase activity	2.25E-03
25	GO:0030570: pectate lyase activity	3.33E-03
26	GO:0016762: xyloglucan:xyloglucosyl transferase activity	4.77E-03
27	GO:0004518: nuclease activity	4.99E-03
28	GO:0004722: protein serine/threonine phosphatase activity	6.56E-03
29	GO:0004721: phosphoprotein phosphatase activity	6.89E-03
30	GO:0016798: hydrolase activity, acting on glycosyl bonds	6.89E-03
31	GO:0009055: electron carrier activity	7.91E-03
32	GO:0004672: protein kinase activity	8.23E-03
33	GO:0003993: acid phosphatase activity	8.99E-03
34	GO:0051539: 4 iron, 4 sulfur cluster binding	9.55E-03
35	GO:0051287: NAD binding	1.19E-02
36	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.97E-02
37	GO:0016829: lyase activity	2.05E-02
38	GO:0008017: microtubule binding	2.51E-02
39	GO:0005506: iron ion binding	2.62E-02
40	GO:0005524: ATP binding	2.83E-02
41	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.88E-02
42	GO:0042802: identical protein binding	2.88E-02
43	GO:0008233: peptidase activity	3.82E-02
44	GO:0004497: monooxygenase activity	3.87E-02
45	GO:0052689: carboxylic ester hydrolase activity	4.15E-02
46	GO:0042803: protein homodimerization activity	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0009930: longitudinal side of cell surface	0.00E+00
3	GO:0009897: external side of plasma membrane	1.89E-04
4	GO:0016605: PML body	1.89E-04
5	GO:0016328: lateral plasma membrane	1.89E-04
6	GO:0030660: Golgi-associated vesicle membrane	3.73E-04
7	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	3.73E-04
8	GO:0072686: mitotic spindle	4.75E-04
9	GO:0031225: anchored component of membrane	6.21E-04
10	GO:0009535: chloroplast thylakoid membrane	6.57E-04
11	GO:0010005: cortical microtubule, transverse to long axis	6.94E-04
12	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	9.32E-04
13	GO:0031305: integral component of mitochondrial inner membrane	9.32E-04
14	GO:0016604: nuclear body	1.32E-03
15	GO:0055028: cortical microtubule	1.47E-03
16	GO:0005740: mitochondrial envelope	1.47E-03
17	GO:0016324: apical plasma membrane	1.47E-03
18	GO:0005765: lysosomal membrane	1.61E-03
19	GO:0009574: preprophase band	1.92E-03
20	GO:0005938: cell cortex	1.92E-03
21	GO:0009507: chloroplast	2.51E-03
22	GO:0046658: anchored component of plasma membrane	3.47E-03
23	GO:0009707: chloroplast outer membrane	7.39E-03
24	GO:0005819: spindle	9.27E-03
25	GO:0010008: endosome membrane	1.48E-02
26	GO:0009579: thylakoid	1.57E-02
27	GO:0009706: chloroplast inner membrane	1.65E-02
28	GO:0009524: phragmoplast	2.01E-02
29	GO:0005759: mitochondrial matrix	2.27E-02
30	GO:0009505: plant-type cell wall	3.34E-02
31	GO:0005874: microtubule	3.78E-02
32	GO:0005743: mitochondrial inner membrane	4.85E-02