co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G21850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
2	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
3	GO:0015690: aluminum cation transport	0.00E+00
4	GO:0002376: immune system process	0.00E+00
5	GO:0045730: respiratory burst	0.00E+00
6	GO:0010324: membrane invagination	0.00E+00
7	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
8	GO:0006979: response to oxidative stress	5.71E-06
9	GO:0010112: regulation of systemic acquired resistance	8.65E-06
10	GO:0010200: response to chitin	8.90E-06
11	GO:0060548: negative regulation of cell death	3.85E-05
12	GO:0006952: defense response	6.65E-05
13	GO:0006468: protein phosphorylation	7.95E-05
14	GO:0009646: response to absence of light	2.00E-04
15	GO:0080173: male-female gamete recognition during double fertilization	2.34E-04
16	GO:0009700: indole phytoalexin biosynthetic process	2.34E-04
17	GO:0009270: response to humidity	2.34E-04
18	GO:0048508: embryonic meristem development	2.34E-04
19	GO:0015760: glucose-6-phosphate transport	2.34E-04
20	GO:0050832: defense response to fungus	3.01E-04
21	GO:0006098: pentose-phosphate shunt	3.13E-04
22	GO:0080167: response to karrikin	4.63E-04
23	GO:1903507: negative regulation of nucleic acid-templated transcription	5.04E-04
24	GO:0019521: D-gluconate metabolic process	5.20E-04
25	GO:0044419: interspecies interaction between organisms	5.20E-04
26	GO:0009945: radial axis specification	5.20E-04
27	GO:0015712: hexose phosphate transport	5.20E-04
28	GO:0051258: protein polymerization	5.20E-04
29	GO:0019725: cellular homeostasis	5.20E-04
30	GO:0019441: tryptophan catabolic process to kynurenine	5.20E-04
31	GO:0015914: phospholipid transport	5.20E-04
32	GO:0009838: abscission	5.20E-04
33	GO:0015802: basic amino acid transport	5.20E-04
34	GO:0080181: lateral root branching	5.20E-04
35	GO:0009266: response to temperature stimulus	7.36E-04
36	GO:0015695: organic cation transport	8.44E-04
37	GO:0015714: phosphoenolpyruvate transport	8.44E-04
38	GO:1900055: regulation of leaf senescence	8.44E-04
39	GO:1900140: regulation of seedling development	8.44E-04
40	GO:0035436: triose phosphate transmembrane transport	8.44E-04
41	GO:0045793: positive regulation of cell size	8.44E-04
42	GO:0010186: positive regulation of cellular defense response	8.44E-04
43	GO:0010150: leaf senescence	8.47E-04
44	GO:2000377: regulation of reactive oxygen species metabolic process	1.01E-03
45	GO:0002679: respiratory burst involved in defense response	1.20E-03
46	GO:0015696: ammonium transport	1.20E-03
47	GO:0051289: protein homotetramerization	1.20E-03
48	GO:0048194: Golgi vesicle budding	1.20E-03
49	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.33E-03
50	GO:0009625: response to insect	1.44E-03
51	GO:0006486: protein glycosylation	1.49E-03
52	GO:0072488: ammonium transmembrane transport	1.61E-03
53	GO:0010107: potassium ion import	1.61E-03
54	GO:0015713: phosphoglycerate transport	1.61E-03
55	GO:1901141: regulation of lignin biosynthetic process	1.61E-03
56	GO:0010109: regulation of photosynthesis	1.61E-03
57	GO:0010483: pollen tube reception	1.61E-03
58	GO:0048638: regulation of developmental growth	1.61E-03
59	GO:0009652: thigmotropism	1.61E-03
60	GO:0034052: positive regulation of plant-type hypersensitive response	2.05E-03
61	GO:0009164: nucleoside catabolic process	2.05E-03
62	GO:0009697: salicylic acid biosynthetic process	2.05E-03
63	GO:0006623: protein targeting to vacuole	2.27E-03
64	GO:0009738: abscisic acid-activated signaling pathway	2.37E-03
65	GO:0006828: manganese ion transport	2.52E-03
66	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.52E-03
67	GO:0009117: nucleotide metabolic process	2.52E-03
68	GO:0006574: valine catabolic process	2.52E-03
69	GO:0009643: photosynthetic acclimation	2.52E-03
70	GO:0010405: arabinogalactan protein metabolic process	2.52E-03
71	GO:0015691: cadmium ion transport	2.52E-03
72	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.52E-03
73	GO:0042742: defense response to bacterium	2.53E-03
74	GO:0009611: response to wounding	2.61E-03
75	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.03E-03
76	GO:0009094: L-phenylalanine biosynthetic process	3.03E-03
77	GO:0042372: phylloquinone biosynthetic process	3.03E-03
78	GO:0009612: response to mechanical stimulus	3.03E-03
79	GO:0009942: longitudinal axis specification	3.03E-03
80	GO:0071446: cellular response to salicylic acid stimulus	3.58E-03
81	GO:1900056: negative regulation of leaf senescence	3.58E-03
82	GO:0050829: defense response to Gram-negative bacterium	3.58E-03
83	GO:0098869: cellular oxidant detoxification	3.58E-03
84	GO:0043090: amino acid import	3.58E-03
85	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.15E-03
86	GO:0009819: drought recovery	4.15E-03
87	GO:0030091: protein repair	4.15E-03
88	GO:0010120: camalexin biosynthetic process	4.74E-03
89	GO:0030968: endoplasmic reticulum unfolded protein response	4.74E-03
90	GO:0009808: lignin metabolic process	4.74E-03
91	GO:2000031: regulation of salicylic acid mediated signaling pathway	4.74E-03
92	GO:0009699: phenylpropanoid biosynthetic process	4.74E-03
93	GO:0009407: toxin catabolic process	5.04E-03
94	GO:0010119: regulation of stomatal movement	5.28E-03
95	GO:0007568: aging	5.28E-03
96	GO:0009051: pentose-phosphate shunt, oxidative branch	5.37E-03
97	GO:0051865: protein autoubiquitination	5.37E-03
98	GO:0046916: cellular transition metal ion homeostasis	5.37E-03
99	GO:0006470: protein dephosphorylation	5.55E-03
100	GO:0007166: cell surface receptor signaling pathway	5.55E-03
101	GO:0048354: mucilage biosynthetic process involved in seed coat development	6.03E-03
102	GO:0030001: metal ion transport	6.60E-03
103	GO:0006995: cellular response to nitrogen starvation	6.71E-03
104	GO:0007064: mitotic sister chromatid cohesion	6.71E-03
105	GO:0006032: chitin catabolic process	6.71E-03
106	GO:0043069: negative regulation of programmed cell death	6.71E-03
107	GO:0006897: endocytosis	6.88E-03
108	GO:0006816: calcium ion transport	7.43E-03
109	GO:0048229: gametophyte development	7.43E-03
110	GO:0051707: response to other organism	7.46E-03
111	GO:0006790: sulfur compound metabolic process	8.17E-03
112	GO:0009414: response to water deprivation	8.29E-03
113	GO:0009636: response to toxic substance	8.39E-03
114	GO:2000012: regulation of auxin polar transport	8.93E-03
115	GO:0006006: glucose metabolic process	8.93E-03
116	GO:0031347: regulation of defense response	9.04E-03
117	GO:0009809: lignin biosynthetic process	1.01E-02
118	GO:0046854: phosphatidylinositol phosphorylation	1.05E-02
119	GO:0009969: xyloglucan biosynthetic process	1.05E-02
120	GO:0009737: response to abscisic acid	1.11E-02
121	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.12E-02
122	GO:0009626: plant-type hypersensitive response	1.27E-02
123	GO:0006874: cellular calcium ion homeostasis	1.31E-02
124	GO:0009620: response to fungus	1.31E-02
125	GO:0003333: amino acid transmembrane transport	1.40E-02
126	GO:0016998: cell wall macromolecule catabolic process	1.40E-02
127	GO:0048511: rhythmic process	1.40E-02
128	GO:0009624: response to nematode	1.44E-02
129	GO:0031348: negative regulation of defense response	1.50E-02
130	GO:0071456: cellular response to hypoxia	1.50E-02
131	GO:0009742: brassinosteroid mediated signaling pathway	1.52E-02
132	GO:0019722: calcium-mediated signaling	1.69E-02
133	GO:0070417: cellular response to cold	1.79E-02
134	GO:0042631: cellular response to water deprivation	1.89E-02
135	GO:0042391: regulation of membrane potential	1.89E-02
136	GO:0000271: polysaccharide biosynthetic process	1.89E-02
137	GO:0000413: protein peptidyl-prolyl isomerization	1.89E-02
138	GO:0010118: stomatal movement	1.89E-02
139	GO:0009845: seed germination	1.95E-02
140	GO:0045489: pectin biosynthetic process	1.99E-02
141	GO:0006885: regulation of pH	1.99E-02
142	GO:0010197: polar nucleus fusion	1.99E-02
143	GO:0009749: response to glucose	2.20E-02
144	GO:0008654: phospholipid biosynthetic process	2.20E-02
145	GO:0010193: response to ozone	2.31E-02
146	GO:0000302: response to reactive oxygen species	2.31E-02
147	GO:0019761: glucosinolate biosynthetic process	2.42E-02
148	GO:1901657: glycosyl compound metabolic process	2.54E-02
149	GO:0009651: response to salt stress	2.64E-02
150	GO:0006904: vesicle docking involved in exocytosis	2.77E-02
151	GO:0009617: response to bacterium	2.97E-02
152	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.13E-02
153	GO:0016311: dephosphorylation	3.50E-02
154	GO:0008219: cell death	3.63E-02
155	GO:0010311: lateral root formation	3.76E-02
156	GO:0009832: plant-type cell wall biogenesis	3.76E-02
157	GO:0016310: phosphorylation	3.96E-02
158	GO:0048527: lateral root development	4.03E-02
159	GO:0009910: negative regulation of flower development	4.03E-02
160	GO:0055114: oxidation-reduction process	4.13E-02
161	GO:0006865: amino acid transport	4.16E-02
162	GO:0009867: jasmonic acid mediated signaling pathway	4.30E-02
163	GO:0045087: innate immune response	4.30E-02
164	GO:0016051: carbohydrate biosynthetic process	4.30E-02
165	GO:0009409: response to cold	4.36E-02
166	GO:0006887: exocytosis	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
3	GO:0004168: dolichol kinase activity	0.00E+00
4	GO:0015370: solute:sodium symporter activity	0.00E+00
5	GO:0016301: kinase activity	3.04E-05
6	GO:0004012: phospholipid-translocating ATPase activity	1.24E-04
7	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.24E-04
8	GO:0019901: protein kinase binding	2.20E-04
9	GO:0019707: protein-cysteine S-acyltransferase activity	2.34E-04
10	GO:2001147: camalexin binding	2.34E-04
11	GO:0031127: alpha-(1,2)-fucosyltransferase activity	2.34E-04
12	GO:2001227: quercitrin binding	2.34E-04
13	GO:0008171: O-methyltransferase activity	4.36E-04
14	GO:0004674: protein serine/threonine kinase activity	4.59E-04
15	GO:0015152: glucose-6-phosphate transmembrane transporter activity	5.20E-04
16	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	5.20E-04
17	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	5.20E-04
18	GO:0001671: ATPase activator activity	5.20E-04
19	GO:0004061: arylformamidase activity	5.20E-04
20	GO:0004385: guanylate kinase activity	5.20E-04
21	GO:0047364: desulfoglucosinolate sulfotransferase activity	5.20E-04
22	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.54E-04
23	GO:0005524: ATP binding	7.22E-04
24	GO:0042409: caffeoyl-CoA O-methyltransferase activity	8.44E-04
25	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	8.44E-04
26	GO:0071917: triose-phosphate transmembrane transporter activity	8.44E-04
27	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	8.44E-04
28	GO:0003714: transcription corepressor activity	1.01E-03
29	GO:0015293: symporter activity	1.19E-03
30	GO:0015204: urea transmembrane transporter activity	1.61E-03
31	GO:0015120: phosphoglycerate transmembrane transporter activity	1.61E-03
32	GO:0015368: calcium:cation antiporter activity	1.61E-03
33	GO:0047769: arogenate dehydratase activity	1.61E-03
34	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.61E-03
35	GO:0004664: prephenate dehydratase activity	1.61E-03
36	GO:0015369: calcium:proton antiporter activity	1.61E-03
37	GO:0047631: ADP-ribose diphosphatase activity	2.05E-03
38	GO:0000210: NAD+ diphosphatase activity	2.52E-03
39	GO:0008519: ammonium transmembrane transporter activity	2.52E-03
40	GO:0004605: phosphatidate cytidylyltransferase activity	2.52E-03
41	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.52E-03
42	GO:0016758: transferase activity, transferring hexosyl groups	3.00E-03
43	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.03E-03
44	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.03E-03
45	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	3.03E-03
46	GO:0005261: cation channel activity	3.03E-03
47	GO:0019900: kinase binding	3.03E-03
48	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.03E-03
49	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.12E-03
50	GO:0004722: protein serine/threonine phosphatase activity	3.43E-03
51	GO:0043295: glutathione binding	3.58E-03
52	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	3.58E-03
53	GO:0005544: calcium-dependent phospholipid binding	4.15E-03
54	GO:0004033: aldo-keto reductase (NADP) activity	4.15E-03
55	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.15E-03
56	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.28E-03
57	GO:0016207: 4-coumarate-CoA ligase activity	5.37E-03
58	GO:0071949: FAD binding	5.37E-03
59	GO:0008417: fucosyltransferase activity	5.37E-03
60	GO:0004672: protein kinase activity	5.39E-03
61	GO:0047617: acyl-CoA hydrolase activity	6.03E-03
62	GO:0050661: NADP binding	6.60E-03
63	GO:0015020: glucuronosyltransferase activity	6.71E-03
64	GO:0004568: chitinase activity	6.71E-03
65	GO:0004364: glutathione transferase activity	7.17E-03
66	GO:0005509: calcium ion binding	7.51E-03
67	GO:0008378: galactosyltransferase activity	8.17E-03
68	GO:0005315: inorganic phosphate transmembrane transporter activity	8.93E-03
69	GO:0008146: sulfotransferase activity	1.05E-02
70	GO:0005217: intracellular ligand-gated ion channel activity	1.05E-02
71	GO:0004970: ionotropic glutamate receptor activity	1.05E-02
72	GO:0004190: aspartic-type endopeptidase activity	1.05E-02
73	GO:0030552: cAMP binding	1.05E-02
74	GO:0030553: cGMP binding	1.05E-02
75	GO:0004497: monooxygenase activity	1.07E-02
76	GO:0015171: amino acid transmembrane transporter activity	1.12E-02
77	GO:0005216: ion channel activity	1.31E-02
78	GO:0051087: chaperone binding	1.31E-02
79	GO:0033612: receptor serine/threonine kinase binding	1.40E-02
80	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.40E-02
81	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.50E-02
82	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.69E-02
83	GO:0030551: cyclic nucleotide binding	1.89E-02
84	GO:0005451: monovalent cation:proton antiporter activity	1.89E-02
85	GO:0005249: voltage-gated potassium channel activity	1.89E-02
86	GO:0015299: solute:proton antiporter activity	2.10E-02
87	GO:0015297: antiporter activity	2.38E-02
88	GO:0015385: sodium:proton antiporter activity	2.54E-02
89	GO:0016597: amino acid binding	2.89E-02
90	GO:0102483: scopolin beta-glucosidase activity	3.38E-02
91	GO:0004721: phosphoprotein phosphatase activity	3.38E-02
92	GO:0015238: drug transmembrane transporter activity	3.76E-02
93	GO:0000287: magnesium ion binding	3.78E-02
94	GO:0004222: metalloendopeptidase activity	3.89E-02
95	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.03E-02
96	GO:0050897: cobalt ion binding	4.03E-02
97	GO:0043531: ADP binding	4.21E-02
98	GO:0000987: core promoter proximal region sequence-specific DNA binding	4.43E-02
99	GO:0050660: flavin adenine dinucleotide binding	4.44E-02
100	GO:0004842: ubiquitin-protein transferase activity	4.49E-02
101	GO:0008422: beta-glucosidase activity	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005886: plasma membrane	2.53E-12
3	GO:0016021: integral component of membrane	1.01E-07
4	GO:0005901: caveola	2.56E-06
5	GO:0000138: Golgi trans cisterna	2.34E-04
6	GO:0008287: protein serine/threonine phosphatase complex	8.44E-04
7	GO:0070062: extracellular exosome	1.20E-03
8	GO:0032586: protein storage vacuole membrane	1.61E-03
9	GO:0000326: protein storage vacuole	4.74E-03
10	GO:0030125: clathrin vesicle coat	6.71E-03
11	GO:0031012: extracellular matrix	8.93E-03
12	GO:0030176: integral component of endoplasmic reticulum membrane	1.05E-02
13	GO:0005769: early endosome	1.14E-02
14	GO:0005777: peroxisome	1.21E-02
15	GO:0005905: clathrin-coated pit	1.40E-02
16	GO:0005789: endoplasmic reticulum membrane	1.80E-02
17	GO:0016020: membrane	1.89E-02
18	GO:0005794: Golgi apparatus	1.91E-02
19	GO:0005783: endoplasmic reticulum	1.97E-02
20	GO:0005770: late endosome	1.99E-02
21	GO:0031965: nuclear membrane	2.20E-02
22	GO:0000145: exocyst	2.42E-02
23	GO:0005887: integral component of plasma membrane	2.58E-02
24	GO:0005773: vacuole	2.60E-02
25	GO:0032580: Golgi cisterna membrane	2.65E-02
26	GO:0000151: ubiquitin ligase complex	3.63E-02
27	GO:0009506: plasmodesma	3.83E-02
28	GO:0000786: nucleosome	4.16E-02
29	GO:0031969: chloroplast membrane	4.76E-02
30	GO:0031902: late endosome membrane	4.85E-02