Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G21560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009312: oligosaccharide biosynthetic process0.00E+00
2GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
3GO:0046865: terpenoid transport0.00E+00
4GO:0018063: cytochrome c-heme linkage0.00E+00
5GO:0051553: flavone biosynthetic process0.00E+00
6GO:0010324: membrane invagination0.00E+00
7GO:0010055: atrichoblast differentiation0.00E+00
8GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
9GO:1902001: fatty acid transmembrane transport0.00E+00
10GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
11GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
12GO:0015690: aluminum cation transport0.00E+00
13GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
14GO:0010112: regulation of systemic acquired resistance7.82E-07
15GO:0071456: cellular response to hypoxia8.10E-07
16GO:0051707: response to other organism5.54E-06
17GO:0009751: response to salicylic acid9.12E-06
18GO:0010150: leaf senescence1.80E-05
19GO:0006952: defense response4.13E-05
20GO:0009636: response to toxic substance9.02E-05
21GO:0009617: response to bacterium2.08E-04
22GO:0009643: photosynthetic acclimation2.41E-04
23GO:1900057: positive regulation of leaf senescence4.18E-04
24GO:0033306: phytol metabolic process4.34E-04
25GO:0010482: regulation of epidermal cell division4.34E-04
26GO:0009700: indole phytoalexin biosynthetic process4.34E-04
27GO:0010230: alternative respiration4.34E-04
28GO:0034214: protein hexamerization4.34E-04
29GO:0050691: regulation of defense response to virus by host4.34E-04
30GO:0009968: negative regulation of signal transduction4.34E-04
31GO:1990542: mitochondrial transmembrane transport4.34E-04
32GO:0032107: regulation of response to nutrient levels4.34E-04
33GO:1902600: hydrogen ion transmembrane transport4.34E-04
34GO:0048508: embryonic meristem development4.34E-04
35GO:0015760: glucose-6-phosphate transport4.34E-04
36GO:0046256: 2,4,6-trinitrotoluene catabolic process4.34E-04
37GO:0043547: positive regulation of GTPase activity4.34E-04
38GO:0080173: male-female gamete recognition during double fertilization4.34E-04
39GO:0042391: regulation of membrane potential5.42E-04
40GO:0042742: defense response to bacterium6.08E-04
41GO:0010200: response to chitin6.12E-04
42GO:0010120: camalexin biosynthetic process6.37E-04
43GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.99E-04
44GO:0010115: regulation of abscisic acid biosynthetic process9.39E-04
45GO:0000719: photoreactive repair9.39E-04
46GO:0015908: fatty acid transport9.39E-04
47GO:0044419: interspecies interaction between organisms9.39E-04
48GO:0009945: radial axis specification9.39E-04
49GO:0010271: regulation of chlorophyll catabolic process9.39E-04
50GO:0015712: hexose phosphate transport9.39E-04
51GO:0051258: protein polymerization9.39E-04
52GO:0015012: heparan sulfate proteoglycan biosynthetic process9.39E-04
53GO:0071668: plant-type cell wall assembly9.39E-04
54GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.39E-04
55GO:0009838: abscission9.39E-04
56GO:0080181: lateral root branching9.39E-04
57GO:0006024: glycosaminoglycan biosynthetic process9.39E-04
58GO:0055088: lipid homeostasis9.39E-04
59GO:0019521: D-gluconate metabolic process9.39E-04
60GO:0009620: response to fungus1.27E-03
61GO:1900055: regulation of leaf senescence1.53E-03
62GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.53E-03
63GO:0006954: inflammatory response1.53E-03
64GO:0080163: regulation of protein serine/threonine phosphatase activity1.53E-03
65GO:0035436: triose phosphate transmembrane transport1.53E-03
66GO:0071398: cellular response to fatty acid1.53E-03
67GO:0015783: GDP-fucose transport1.53E-03
68GO:0015692: lead ion transport1.53E-03
69GO:0015695: organic cation transport1.53E-03
70GO:0015714: phosphoenolpyruvate transport1.53E-03
71GO:0080168: abscisic acid transport1.53E-03
72GO:0050832: defense response to fungus1.63E-03
73GO:0006979: response to oxidative stress1.87E-03
74GO:0009407: toxin catabolic process1.97E-03
75GO:0015696: ammonium transport2.21E-03
76GO:0051289: protein homotetramerization2.21E-03
77GO:0010116: positive regulation of abscisic acid biosynthetic process2.21E-03
78GO:0006020: inositol metabolic process2.21E-03
79GO:0002239: response to oomycetes2.21E-03
80GO:0080147: root hair cell development2.45E-03
81GO:2000377: regulation of reactive oxygen species metabolic process2.45E-03
82GO:0051567: histone H3-K9 methylation2.97E-03
83GO:0015713: phosphoglycerate transport2.97E-03
84GO:1901141: regulation of lignin biosynthetic process2.97E-03
85GO:0010109: regulation of photosynthesis2.97E-03
86GO:0072488: ammonium transmembrane transport2.97E-03
87GO:0009625: response to insect3.55E-03
88GO:0034052: positive regulation of plant-type hypersensitive response3.80E-03
89GO:0009229: thiamine diphosphate biosynthetic process3.80E-03
90GO:0016094: polyprenol biosynthetic process3.80E-03
91GO:0006855: drug transmembrane transport3.96E-03
92GO:0007166: cell surface receptor signaling pathway4.15E-03
93GO:0009737: response to abscisic acid4.29E-03
94GO:0033365: protein localization to organelle4.71E-03
95GO:0009228: thiamine biosynthetic process4.71E-03
96GO:0009759: indole glucosinolate biosynthetic process4.71E-03
97GO:0010256: endomembrane system organization4.71E-03
98GO:0009753: response to jasmonic acid5.21E-03
99GO:0009749: response to glucose5.63E-03
100GO:0042372: phylloquinone biosynthetic process5.68E-03
101GO:0045926: negative regulation of growth5.68E-03
102GO:0009942: longitudinal axis specification5.68E-03
103GO:0071470: cellular response to osmotic stress5.68E-03
104GO:0002229: defense response to oomycetes6.03E-03
105GO:0010193: response to ozone6.03E-03
106GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.71E-03
107GO:0050829: defense response to Gram-negative bacterium6.71E-03
108GO:1902074: response to salt6.71E-03
109GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway6.71E-03
110GO:0043090: amino acid import6.71E-03
111GO:1900056: negative regulation of leaf senescence6.71E-03
112GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.81E-03
113GO:0009819: drought recovery7.81E-03
114GO:0009850: auxin metabolic process7.81E-03
115GO:0043068: positive regulation of programmed cell death7.81E-03
116GO:0031540: regulation of anthocyanin biosynthetic process7.81E-03
117GO:0010928: regulation of auxin mediated signaling pathway7.81E-03
118GO:0051607: defense response to virus8.25E-03
119GO:0006997: nucleus organization8.97E-03
120GO:0010204: defense response signaling pathway, resistance gene-independent8.97E-03
121GO:0017004: cytochrome complex assembly8.97E-03
122GO:0010208: pollen wall assembly8.97E-03
123GO:0080167: response to karrikin9.13E-03
124GO:0009627: systemic acquired resistance9.77E-03
125GO:0019432: triglyceride biosynthetic process1.02E-02
126GO:0015780: nucleotide-sugar transport1.02E-02
127GO:0009835: fruit ripening1.02E-02
128GO:0007338: single fertilization1.02E-02
129GO:0006098: pentose-phosphate shunt1.02E-02
130GO:0048268: clathrin coat assembly1.15E-02
131GO:0010380: regulation of chlorophyll biosynthetic process1.15E-02
132GO:0008202: steroid metabolic process1.15E-02
133GO:0019538: protein metabolic process1.28E-02
134GO:0009870: defense response signaling pathway, resistance gene-dependent1.28E-02
135GO:0006032: chitin catabolic process1.28E-02
136GO:0051555: flavonol biosynthetic process1.28E-02
137GO:0009611: response to wounding1.30E-02
138GO:0019684: photosynthesis, light reaction1.42E-02
139GO:0009089: lysine biosynthetic process via diaminopimelate1.42E-02
140GO:0048765: root hair cell differentiation1.42E-02
141GO:0009684: indoleacetic acid biosynthetic process1.42E-02
142GO:0000266: mitochondrial fission1.56E-02
143GO:0012501: programmed cell death1.56E-02
144GO:2000028: regulation of photoperiodism, flowering1.71E-02
145GO:0006829: zinc II ion transport1.71E-02
146GO:0006887: exocytosis1.73E-02
147GO:0006897: endocytosis1.73E-02
148GO:0002237: response to molecule of bacterial origin1.86E-02
149GO:0046688: response to copper ion2.02E-02
150GO:0009225: nucleotide-sugar metabolic process2.02E-02
151GO:0000162: tryptophan biosynthetic process2.18E-02
152GO:0031347: regulation of defense response2.27E-02
153GO:0006289: nucleotide-excision repair2.35E-02
154GO:0015031: protein transport2.41E-02
155GO:0010026: trichome differentiation2.52E-02
156GO:0006825: copper ion transport2.52E-02
157GO:0006874: cellular calcium ion homeostasis2.52E-02
158GO:0006486: protein glycosylation2.53E-02
159GO:0016998: cell wall macromolecule catabolic process2.70E-02
160GO:0006334: nucleosome assembly2.70E-02
161GO:0009269: response to desiccation2.70E-02
162GO:0016226: iron-sulfur cluster assembly2.87E-02
163GO:0009693: ethylene biosynthetic process3.06E-02
164GO:0009411: response to UV3.06E-02
165GO:0006012: galactose metabolic process3.06E-02
166GO:0009723: response to ethylene3.13E-02
167GO:0009626: plant-type hypersensitive response3.19E-02
168GO:0042127: regulation of cell proliferation3.25E-02
169GO:0070417: cellular response to cold3.44E-02
170GO:0009624: response to nematode3.60E-02
171GO:0000271: polysaccharide biosynthetic process3.63E-02
172GO:0000413: protein peptidyl-prolyl isomerization3.63E-02
173GO:0006520: cellular amino acid metabolic process3.83E-02
174GO:0010182: sugar mediated signaling pathway3.83E-02
175GO:0048868: pollen tube development3.83E-02
176GO:0045489: pectin biosynthetic process3.83E-02
177GO:0009414: response to water deprivation3.96E-02
178GO:0015979: photosynthesis4.01E-02
179GO:0009646: response to absence of light4.03E-02
180GO:0071554: cell wall organization or biogenesis4.45E-02
181GO:0019761: glucosinolate biosynthetic process4.66E-02
RankGO TermAdjusted P value
1GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
2GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
3GO:0050334: thiaminase activity0.00E+00
4GO:0005212: structural constituent of eye lens0.00E+00
5GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
6GO:0033759: flavone synthase activity0.00E+00
7GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
8GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
9GO:0030552: cAMP binding1.76E-04
10GO:0030553: cGMP binding1.76E-04
11GO:0005216: ion channel activity2.73E-04
12GO:0043295: glutathione binding4.18E-04
13GO:0019707: protein-cysteine S-acyltransferase activity4.34E-04
14GO:0047940: glucuronokinase activity4.34E-04
15GO:2001147: camalexin binding4.34E-04
16GO:0015245: fatty acid transporter activity4.34E-04
17GO:0010285: L,L-diaminopimelate aminotransferase activity4.34E-04
18GO:0016920: pyroglutamyl-peptidase activity4.34E-04
19GO:2001227: quercitrin binding4.34E-04
20GO:0047893: flavonol 3-O-glucosyltransferase activity5.22E-04
21GO:0005249: voltage-gated potassium channel activity5.42E-04
22GO:0030551: cyclic nucleotide binding5.42E-04
23GO:0050736: O-malonyltransferase activity9.39E-04
24GO:0015036: disulfide oxidoreductase activity9.39E-04
25GO:0047364: desulfoglucosinolate sulfotransferase activity9.39E-04
26GO:0015152: glucose-6-phosphate transmembrane transporter activity9.39E-04
27GO:0032934: sterol binding9.39E-04
28GO:0071917: triose-phosphate transmembrane transporter activity1.53E-03
29GO:0005457: GDP-fucose transmembrane transporter activity1.53E-03
30GO:0004324: ferredoxin-NADP+ reductase activity1.53E-03
31GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.53E-03
32GO:0016531: copper chaperone activity1.53E-03
33GO:0022890: inorganic cation transmembrane transporter activity2.21E-03
34GO:0010178: IAA-amino acid conjugate hydrolase activity2.21E-03
35GO:0017077: oxidative phosphorylation uncoupler activity2.21E-03
36GO:0035529: NADH pyrophosphatase activity2.21E-03
37GO:0001046: core promoter sequence-specific DNA binding2.45E-03
38GO:0050378: UDP-glucuronate 4-epimerase activity2.97E-03
39GO:0004930: G-protein coupled receptor activity2.97E-03
40GO:0009916: alternative oxidase activity2.97E-03
41GO:0015120: phosphoglycerate transmembrane transporter activity2.97E-03
42GO:0004834: tryptophan synthase activity2.97E-03
43GO:0004737: pyruvate decarboxylase activity2.97E-03
44GO:0035251: UDP-glucosyltransferase activity2.97E-03
45GO:0004364: glutathione transferase activity3.09E-03
46GO:0015297: antiporter activity3.15E-03
47GO:0002094: polyprenyltransferase activity3.80E-03
48GO:0016773: phosphotransferase activity, alcohol group as acceptor3.80E-03
49GO:0005496: steroid binding3.80E-03
50GO:0047631: ADP-ribose diphosphatase activity3.80E-03
51GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.80E-03
52GO:0004499: N,N-dimethylaniline monooxygenase activity3.86E-03
53GO:0000210: NAD+ diphosphatase activity4.71E-03
54GO:0008519: ammonium transmembrane transporter activity4.71E-03
55GO:0030976: thiamine pyrophosphate binding4.71E-03
56GO:0102391: decanoate--CoA ligase activity5.68E-03
57GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.68E-03
58GO:0005261: cation channel activity5.68E-03
59GO:0004144: diacylglycerol O-acyltransferase activity5.68E-03
60GO:0003978: UDP-glucose 4-epimerase activity5.68E-03
61GO:0004656: procollagen-proline 4-dioxygenase activity5.68E-03
62GO:0004467: long-chain fatty acid-CoA ligase activity6.71E-03
63GO:0016831: carboxy-lyase activity6.71E-03
64GO:0102425: myricetin 3-O-glucosyltransferase activity6.71E-03
65GO:0102360: daphnetin 3-O-glucosyltransferase activity6.71E-03
66GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity7.77E-03
67GO:0008483: transaminase activity7.77E-03
68GO:0004033: aldo-keto reductase (NADP) activity7.81E-03
69GO:0004714: transmembrane receptor protein tyrosine kinase activity7.81E-03
70GO:0008142: oxysterol binding8.97E-03
71GO:0004497: monooxygenase activity9.13E-03
72GO:0016301: kinase activity9.13E-03
73GO:0016758: transferase activity, transferring hexosyl groups9.62E-03
74GO:0008375: acetylglucosaminyltransferase activity9.77E-03
75GO:0071949: FAD binding1.02E-02
76GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.02E-02
77GO:0047617: acyl-CoA hydrolase activity1.15E-02
78GO:0015238: drug transmembrane transporter activity1.20E-02
79GO:0004864: protein phosphatase inhibitor activity1.28E-02
80GO:0004568: chitinase activity1.28E-02
81GO:0005545: 1-phosphatidylinositol binding1.28E-02
82GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.37E-02
83GO:0016757: transferase activity, transferring glycosyl groups1.38E-02
84GO:0015386: potassium:proton antiporter activity1.42E-02
85GO:0008559: xenobiotic-transporting ATPase activity1.42E-02
86GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.45E-02
87GO:0050661: NADP binding1.66E-02
88GO:0005315: inorganic phosphate transmembrane transporter activity1.71E-02
89GO:0008194: UDP-glycosyltransferase activity1.73E-02
90GO:0043565: sequence-specific DNA binding1.73E-02
91GO:0016740: transferase activity1.76E-02
92GO:0008266: poly(U) RNA binding1.86E-02
93GO:0003712: transcription cofactor activity2.02E-02
94GO:0008146: sulfotransferase activity2.02E-02
95GO:0004970: ionotropic glutamate receptor activity2.02E-02
96GO:0005217: intracellular ligand-gated ion channel activity2.02E-02
97GO:0051536: iron-sulfur cluster binding2.35E-02
98GO:0031418: L-ascorbic acid binding2.35E-02
99GO:0003954: NADH dehydrogenase activity2.35E-02
100GO:0015079: potassium ion transmembrane transporter activity2.52E-02
101GO:0008324: cation transmembrane transporter activity2.52E-02
102GO:0005516: calmodulin binding2.52E-02
103GO:0019706: protein-cysteine S-palmitoyltransferase activity2.70E-02
104GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.87E-02
105GO:0080043: quercetin 3-O-glucosyltransferase activity3.29E-02
106GO:0080044: quercetin 7-O-glucosyltransferase activity3.29E-02
107GO:0004674: protein serine/threonine kinase activity3.34E-02
108GO:0005199: structural constituent of cell wall3.83E-02
109GO:0046873: metal ion transmembrane transporter activity3.83E-02
110GO:0030276: clathrin binding3.83E-02
111GO:0050662: coenzyme binding4.03E-02
112GO:0015299: solute:proton antiporter activity4.03E-02
113GO:0019901: protein kinase binding4.24E-02
114GO:0046872: metal ion binding4.27E-02
115GO:0042803: protein homodimerization activity4.50E-02
116GO:0004871: signal transducer activity4.50E-02
117GO:0004197: cysteine-type endopeptidase activity4.66E-02
118GO:0030170: pyridoxal phosphate binding4.98E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0016021: integral component of membrane4.33E-08
3GO:0005794: Golgi apparatus2.43E-06
4GO:0000164: protein phosphatase type 1 complex1.69E-04
5GO:0000138: Golgi trans cisterna4.34E-04
6GO:0005886: plasma membrane6.29E-04
7GO:0005901: caveola9.39E-04
8GO:0031314: extrinsic component of mitochondrial inner membrane9.39E-04
9GO:0031304: intrinsic component of mitochondrial inner membrane9.39E-04
10GO:0005802: trans-Golgi network1.05E-03
11GO:0005768: endosome1.42E-03
12GO:0009530: primary cell wall1.53E-03
13GO:0030658: transport vesicle membrane2.21E-03
14GO:0070062: extracellular exosome2.21E-03
15GO:0000813: ESCRT I complex3.80E-03
16GO:0005743: mitochondrial inner membrane4.06E-03
17GO:0005777: peroxisome5.08E-03
18GO:0005795: Golgi stack2.02E-02
19GO:0046658: anchored component of plasma membrane2.14E-02
20GO:0005769: early endosome2.18E-02
21GO:0005758: mitochondrial intermembrane space2.35E-02
22GO:0070469: respiratory chain2.52E-02
23GO:0005887: integral component of plasma membrane2.60E-02
24GO:0005741: mitochondrial outer membrane2.70E-02
25GO:0005905: clathrin-coated pit2.70E-02
26GO:0009506: plasmodesma2.91E-02
27GO:0005774: vacuolar membrane3.24E-02
28GO:0030136: clathrin-coated vesicle3.44E-02
29GO:0009504: cell plate4.24E-02
30GO:0031965: nuclear membrane4.24E-02
31GO:0019898: extrinsic component of membrane4.24E-02
32GO:0000145: exocyst4.66E-02
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Gene type



Gene DE type