co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G20940

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009971: anastral spindle assembly involved in male meiosis	0.00E+00
2	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
3	GO:0000819: sister chromatid segregation	0.00E+00
4	GO:0010583: response to cyclopentenone	1.09E-07
5	GO:0010389: regulation of G2/M transition of mitotic cell cycle	4.79E-05
6	GO:0000082: G1/S transition of mitotic cell cycle	8.96E-05
7	GO:0007018: microtubule-based movement	9.04E-05
8	GO:0006438: valyl-tRNA aminoacylation	1.58E-04
9	GO:0070509: calcium ion import	1.58E-04
10	GO:0048016: inositol phosphate-mediated signaling	1.58E-04
11	GO:0000910: cytokinesis	1.74E-04
12	GO:0006949: syncytium formation	2.50E-04
13	GO:0016042: lipid catabolic process	3.23E-04
14	GO:0010033: response to organic substance	3.60E-04
15	GO:0000086: G2/M transition of mitotic cell cycle	3.60E-04
16	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	5.89E-04
17	GO:0010226: response to lithium ion	5.89E-04
18	GO:1902806: regulation of cell cycle G1/S phase transition	5.89E-04
19	GO:0016045: detection of bacterium	5.89E-04
20	GO:0031145: anaphase-promoting complex-dependent catabolic process	5.89E-04
21	GO:0001578: microtubule bundle formation	5.89E-04
22	GO:0030261: chromosome condensation	5.89E-04
23	GO:0019953: sexual reproduction	6.55E-04
24	GO:0007276: gamete generation	8.43E-04
25	GO:0016572: histone phosphorylation	8.43E-04
26	GO:0009647: skotomorphogenesis	8.43E-04
27	GO:0009558: embryo sac cellularization	8.43E-04
28	GO:0051513: regulation of monopolar cell growth	8.43E-04
29	GO:0030071: regulation of mitotic metaphase/anaphase transition	8.43E-04
30	GO:0008284: positive regulation of cell proliferation	9.96E-04
31	GO:0051301: cell division	1.10E-03
32	GO:0009755: hormone-mediated signaling pathway	1.12E-03
33	GO:0051322: anaphase	1.12E-03
34	GO:0051726: regulation of cell cycle	1.25E-03
35	GO:0048497: maintenance of floral organ identity	1.41E-03
36	GO:0007094: mitotic spindle assembly checkpoint	1.41E-03
37	GO:0032957: inositol trisphosphate metabolic process	1.41E-03
38	GO:0009828: plant-type cell wall loosening	1.71E-03
39	GO:0046855: inositol phosphate dephosphorylation	1.74E-03
40	GO:0010067: procambium histogenesis	2.09E-03
41	GO:2000037: regulation of stomatal complex patterning	2.09E-03
42	GO:0015995: chlorophyll biosynthetic process	2.38E-03
43	GO:0010444: guard mother cell differentiation	2.45E-03
44	GO:0000712: resolution of meiotic recombination intermediates	2.45E-03
45	GO:0048528: post-embryonic root development	2.45E-03
46	GO:1900056: negative regulation of leaf senescence	2.45E-03
47	GO:0046620: regulation of organ growth	2.84E-03
48	GO:0001522: pseudouridine synthesis	2.84E-03
49	GO:0032875: regulation of DNA endoreduplication	2.84E-03
50	GO:0010492: maintenance of shoot apical meristem identity	2.84E-03
51	GO:0010468: regulation of gene expression	2.89E-03
52	GO:0010332: response to gamma radiation	3.67E-03
53	GO:0009835: fruit ripening	3.67E-03
54	GO:0009826: unidimensional cell growth	3.83E-03
55	GO:0007346: regulation of mitotic cell cycle	4.12E-03
56	GO:0009640: photomorphogenesis	4.29E-03
57	GO:0006782: protoporphyrinogen IX biosynthetic process	4.58E-03
58	GO:0051026: chiasma assembly	4.58E-03
59	GO:0006259: DNA metabolic process	4.58E-03
60	GO:0006265: DNA topological change	5.05E-03
61	GO:0048229: gametophyte development	5.05E-03
62	GO:0046856: phosphatidylinositol dephosphorylation	5.05E-03
63	GO:0009664: plant-type cell wall organization	5.38E-03
64	GO:0000266: mitochondrial fission	5.55E-03
65	GO:0006312: mitotic recombination	5.55E-03
66	GO:0012501: programmed cell death	5.55E-03
67	GO:0010588: cotyledon vascular tissue pattern formation	6.06E-03
68	GO:2000012: regulation of auxin polar transport	6.06E-03
69	GO:0007034: vacuolar transport	6.59E-03
70	GO:0009887: animal organ morphogenesis	6.59E-03
71	GO:0009934: regulation of meristem structural organization	6.59E-03
72	GO:0070588: calcium ion transmembrane transport	7.13E-03
73	GO:0006636: unsaturated fatty acid biosynthetic process	7.69E-03
74	GO:0006833: water transport	7.69E-03
75	GO:0080147: root hair cell development	8.27E-03
76	GO:0006418: tRNA aminoacylation for protein translation	8.86E-03
77	GO:0007017: microtubule-based process	8.86E-03
78	GO:0048278: vesicle docking	9.46E-03
79	GO:0009693: ethylene biosynthetic process	1.07E-02
80	GO:0010091: trichome branching	1.14E-02
81	GO:0042127: regulation of cell proliferation	1.14E-02
82	GO:0071555: cell wall organization	1.22E-02
83	GO:0000226: microtubule cytoskeleton organization	1.27E-02
84	GO:0034220: ion transmembrane transport	1.27E-02
85	GO:0010051: xylem and phloem pattern formation	1.27E-02
86	GO:0010305: leaf vascular tissue pattern formation	1.34E-02
87	GO:0009741: response to brassinosteroid	1.34E-02
88	GO:0061025: membrane fusion	1.41E-02
89	GO:0007059: chromosome segregation	1.41E-02
90	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.56E-02
91	GO:0071554: cell wall organization or biogenesis	1.56E-02
92	GO:0030163: protein catabolic process	1.71E-02
93	GO:0071281: cellular response to iron ion	1.71E-02
94	GO:0019760: glucosinolate metabolic process	1.78E-02
95	GO:0006906: vesicle fusion	2.19E-02
96	GO:0048573: photoperiodism, flowering	2.27E-02
97	GO:0005975: carbohydrate metabolic process	2.28E-02
98	GO:0016311: dephosphorylation	2.36E-02
99	GO:0007049: cell cycle	2.47E-02
100	GO:0010311: lateral root formation	2.53E-02
101	GO:0000160: phosphorelay signal transduction system	2.53E-02
102	GO:0030001: metal ion transport	3.17E-02
103	GO:0006887: exocytosis	3.27E-02
104	GO:0008283: cell proliferation	3.46E-02
105	GO:0009926: auxin polar transport	3.46E-02
106	GO:0051707: response to other organism	3.46E-02
107	GO:0000209: protein polyubiquitination	3.56E-02
108	GO:0007165: signal transduction	3.63E-02
109	GO:0042538: hyperosmotic salinity response	4.07E-02
110	GO:0048364: root development	4.21E-02
111	GO:0009736: cytokinin-activated signaling pathway	4.28E-02
112	GO:0048367: shoot system development	4.93E-02
113	GO:0009733: response to auxin	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0047661: amino-acid racemase activity	0.00E+00
2	GO:0005089: Rho guanyl-nucleotide exchange factor activity	7.91E-06
3	GO:0052689: carboxylic ester hydrolase activity	2.26E-05
4	GO:0008017: microtubule binding	4.35E-05
5	GO:0030332: cyclin binding	4.79E-05
6	GO:0003777: microtubule motor activity	9.27E-05
7	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	1.44E-04
8	GO:0008569: ATP-dependent microtubule motor activity, minus-end-directed	1.58E-04
9	GO:0046030: inositol trisphosphate phosphatase activity	1.58E-04
10	GO:0009374: biotin binding	1.58E-04
11	GO:0004832: valine-tRNA ligase activity	1.58E-04
12	GO:0016630: protochlorophyllide reductase activity	3.60E-04
13	GO:0004109: coproporphyrinogen oxidase activity	3.60E-04
14	GO:0016788: hydrolase activity, acting on ester bonds	7.28E-04
15	GO:0003916: DNA topoisomerase activity	8.43E-04
16	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	1.15E-03
17	GO:0003989: acetyl-CoA carboxylase activity	1.41E-03
18	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	1.74E-03
19	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	2.84E-03
20	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.90E-03
21	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	3.25E-03
22	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	3.25E-03
23	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	5.55E-03
24	GO:0016298: lipase activity	5.98E-03
25	GO:0004565: beta-galactosidase activity	6.06E-03
26	GO:0005262: calcium channel activity	6.06E-03
27	GO:0009982: pseudouridine synthase activity	6.06E-03
28	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.59E-03
29	GO:0004190: aspartic-type endopeptidase activity	7.13E-03
30	GO:0004650: polygalacturonase activity	7.50E-03
31	GO:0003779: actin binding	7.97E-03
32	GO:0004707: MAP kinase activity	9.46E-03
33	GO:0008094: DNA-dependent ATPase activity	9.46E-03
34	GO:0019706: protein-cysteine S-palmitoyltransferase activity	9.46E-03
35	GO:0030570: pectate lyase activity	1.07E-02
36	GO:0004812: aminoacyl-tRNA ligase activity	1.20E-02
37	GO:0004518: nuclease activity	1.63E-02
38	GO:0000156: phosphorelay response regulator activity	1.71E-02
39	GO:0051015: actin filament binding	1.71E-02
40	GO:0005515: protein binding	1.77E-02
41	GO:0016791: phosphatase activity	1.78E-02
42	GO:0005200: structural constituent of cytoskeleton	1.86E-02
43	GO:0016413: O-acetyltransferase activity	1.94E-02
44	GO:0015250: water channel activity	2.02E-02
45	GO:0005096: GTPase activator activity	2.53E-02
46	GO:0003993: acid phosphatase activity	2.98E-02
47	GO:0000149: SNARE binding	3.08E-02
48	GO:0005484: SNAP receptor activity	3.46E-02
49	GO:0004722: protein serine/threonine phosphatase activity	3.59E-02
50	GO:0009055: electron carrier activity	4.32E-02
51	GO:0031625: ubiquitin protein ligase binding	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0005872: minus-end kinesin complex	0.00E+00
2	GO:0005828: kinetochore microtubule	1.97E-05
3	GO:0000777: condensed chromosome kinetochore	6.70E-05
4	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	1.44E-04
5	GO:0000796: condensin complex	1.58E-04
6	GO:0009524: phragmoplast	2.33E-04
7	GO:0005819: spindle	4.18E-04
8	GO:0009317: acetyl-CoA carboxylase complex	5.89E-04
9	GO:0005874: microtubule	9.27E-04
10	GO:0030286: dynein complex	1.12E-03
11	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.12E-03
12	GO:0000776: kinetochore	1.41E-03
13	GO:0000793: condensed chromosome	1.74E-03
14	GO:0000815: ESCRT III complex	2.09E-03
15	GO:0010369: chromocenter	2.09E-03
16	GO:0000794: condensed nuclear chromosome	2.45E-03
17	GO:0005737: cytoplasm	2.83E-03
18	GO:0046658: anchored component of plasma membrane	3.30E-03
19	GO:0000922: spindle pole	3.67E-03
20	GO:0005876: spindle microtubule	4.12E-03
21	GO:0005884: actin filament	5.05E-03
22	GO:0090404: pollen tube tip	5.05E-03
23	GO:0009574: preprophase band	6.06E-03
24	GO:0030659: cytoplasmic vesicle membrane	6.59E-03
25	GO:0031225: anchored component of membrane	8.24E-03
26	GO:0005576: extracellular region	8.36E-03
27	GO:0015629: actin cytoskeleton	1.07E-02
28	GO:0005871: kinesin complex	1.20E-02
29	GO:0005618: cell wall	1.25E-02
30	GO:0009504: cell plate	1.48E-02
31	GO:0031201: SNARE complex	3.27E-02
32	GO:0005856: cytoskeleton	3.76E-02
33	GO:0005635: nuclear envelope	4.49E-02